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The map label for this gene is yfcE [H]

Identifier: 108812329

GI number: 108812329

Start: 2451118

End: 2451705

Strand: Reverse

Name: yfcE [H]

Synonym: YPN_2167

Alternate gene names: 108812329

Gene position: 2451705-2451118 (Counterclockwise)

Preceding gene: 108812330

Following gene: 108812328

Centisome position: 54.07

GC content: 50.0

Gene sequence:

>588_bases
ATGAAGTTAATGTTTGCTTCTGACCTGCATGGTTCGTTACCGGCCACGGAACGTGTTTTGGCGATCTTTGATCACAGCGG
TGCTCAATGGCTGGTACTACTGGGTGATTTACTTAACCACGGGCCGCGCAATGCATTACCTGAGGGGTATCAACCTGCAG
CGGTGGCGGAGTCTCTTAATGCCTACAAACCTGCAGCGGTGGCGGAGTCTCTTAATGCCTACAAGGATAGCATTATTGCC
GTGCGCGGCAATTGCGACAGTGAAGTCGATCAAATGCTACTTCAATTCCCCATCATGGCGGGTTGGCAGCAGATTATTAT
GCCTGAAACACGTTTATTCCTGACCCATGGTCACCTTTATCATCCCGGTGCGCTTCCTCCATTGCGTCATGGGGATGTCC
TGGCTTATGGTCATACCCACCTGCCACAAGCACAATGGCAAGGTGATATCATCTGTTTTAACCCAGGTTCCGTGAGTATC
CCAAAGGGGGAATACCCGGCGAGCTATGGCATGTTGGACAAGGGTGTTTTGCAGGTTCTTACCCTACAAGGTGATGAAAT
TGTCGCCCGATTGGCACTAAAAAATTAA

Upstream 100 bases:

>100_bases
CATGGTAGATACTGACTTTTATCGGATTAATCTGCTGGATTGGGTGATAGAATAGCGCTTCTTTTATTATTGAGATGATG
ACCAGAGAGAAAACGATATC

Downstream 100 bases:

>100_bases
TCAATACACAGCTTTTATACCCCAATAATGCGAGTTGTAGGAAGGCGGCAATTGAGTAAATGCCCAAGCGCTGACAGGAG
TCAGTGACGCGGCAGCCAAC

Product: phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MKLMFASDLHGSLPATERVLAIFDHSGAQWLVLLGDLLNHGPRNALPEGYQPAAVAESLNAYKPAAVAESLNAYKDSIIA
VRGNCDSEVDQMLLQFPIMAGWQQIIMPETRLFLTHGHLYHPGALPPLRHGDVLAYGHTHLPQAQWQGDIICFNPGSVSI
PKGEYPASYGMLDKGVLQVLTLQGDEIVARLALKN

Sequences:

>Translated_195_residues
MKLMFASDLHGSLPATERVLAIFDHSGAQWLVLLGDLLNHGPRNALPEGYQPAAVAESLNAYKPAAVAESLNAYKDSIIA
VRGNCDSEVDQMLLQFPIMAGWQQIIMPETRLFLTHGHLYHPGALPPLRHGDVLAYGHTHLPQAQWQGDIICFNPGSVSI
PKGEYPASYGMLDKGVLQVLTLQGDEIVARLALKN
>Mature_195_residues
MKLMFASDLHGSLPATERVLAIFDHSGAQWLVLLGDLLNHGPRNALPEGYQPAAVAESLNAYKPAAVAESLNAYKDSIIA
VRGNCDSEVDQMLLQFPIMAGWQQIIMPETRLFLTHGHLYHPGALPPLRHGDVLAYGHTHLPQAQWQGDIICFNPGSVSI
PKGEYPASYGMLDKGVLQVLTLQGDEIVARLALKN

Specific function: Shows phosphodiesterase activity [H]

COG id: COG0622

COG function: function code R; Predicted phosphoesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily. YfcE family [H]

Homologues:

Organism=Escherichia coli, GI1788638, Length=194, Percent_Identity=65.4639175257732, Blast_Score=253, Evalue=8e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843
- InterPro:   IPR020935
- InterPro:   IPR000979 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 21257; Mature: 21257

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: PS01269 UPF0025

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLMFASDLHGSLPATERVLAIFDHSGAQWLVLLGDLLNHGPRNALPEGYQPAAVAESLN
CCEEECCCCCCCCCCHHEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
AYKPAAVAESLNAYKDSIIAVRGNCDSEVDQMLLQFPIMAGWQQIIMPETRLFLTHGHLY
CCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHCHHHHHCCCCEEEEEECCEE
HPGALPPLRHGDVLAYGHTHLPQAQWQGDIICFNPGSVSIPKGEYPASYGMLDKGVLQVL
CCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHE
TLQGDEIVARLALKN
EECCHHHHHHEECCC
>Mature Secondary Structure
MKLMFASDLHGSLPATERVLAIFDHSGAQWLVLLGDLLNHGPRNALPEGYQPAAVAESLN
CCEEECCCCCCCCCCHHEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
AYKPAAVAESLNAYKDSIIAVRGNCDSEVDQMLLQFPIMAGWQQIIMPETRLFLTHGHLY
CCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHCHHHHHCCCCEEEEEECCEE
HPGALPPLRHGDVLAYGHTHLPQAQWQGDIICFNPGSVSIPKGEYPASYGMLDKGVLQVL
CCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHE
TLQGDEIVARLALKN
EECCHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]