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The map label for this gene is yfbS [H]

Identifier: 108812316

GI number: 108812316

Start: 2436924

End: 2438816

Strand: Reverse

Name: yfbS [H]

Synonym: YPN_2154

Alternate gene names: 108812316

Gene position: 2438816-2436924 (Counterclockwise)

Preceding gene: 108812317

Following gene: 108812313

Centisome position: 53.78

GC content: 50.24

Gene sequence:

>1893_bases
ATGTTTTACTGCCAGAGCCGGATATTCTCTTTCACTTTTTGTTTTGCCAACGAGGCCATTTTGAACAGCGAACTACTGTG
GGTGTTGACGCTACTGCTGATAGCTATTGTGCTGTTTACCACGAATAAACTGCGAATGGATGTCGTCGCGTTGTTGGTGA
TTATTGCCTTTGTGATGAGTGGAACATTGTCATTATCTGAGGCTACCAGTGGGTTCAGTGATCCCAATGTTATCTTGATT
GCTGCGTTGTTTGTGATTGGTGAAGGGTTAGTCAGGACTGGTGTCGCCTACCAAATGGGTGATTGGTTGGTGAAAGTGGC
CGGCCACAGTGAAACAAAAATGTTAGCGTTGCTAATGGTTACCGTCGCCGGATTGGGTGCCTTTATGAGTTCAACTGGCG
TCGTGGCGATTTTTATTCCAGTGGTACTGAGTGTGGCTAGCCGGATGAAAATCTCACCGGGCCGTTTGATGATGCCACTG
AGTTTTGCCGGTTTAATCAGCGGCATGATGACTCTGGTAGCAACCCCGCCCAATATGGTGGTCAACAGTGAATTAGTACG
CGAAGGGATCAAAGGGTTCGGTTTCTTCGGCGTGACACCAATTGGCATTATCATTTTGTTCATGGGCGTGGCTTACATGT
TAGTTGCCCGGCGCTGGCTGGGGGGCAAACAAGAACACACTGAGAAAGATCAATGGAAGCGGCGTACCTTCCGTGATCTG
ATTCGCGATTATAAGCTGACCGGTCGTGCCCGTCGTCTGGCTATTCGTCATGGCTCCCCATTGATTGGTCGTTCACTCGA
TGAATTGCATCTGCGCGCCCGTTATGGCGCGAATGTAGTGGGTATTGAACGGTGGCGGCGTTTTCGTCGGGTGATGGTGA
GTGCGACAGGCTCGTCGGAACTGCGTGAAAATGATGTGTTGCTGATTGATATGTCCGATTGTGATATGGACTTACGTGAA
TTCTGTAGCGAACAGATGCTAGAACCACTGGTGTTACGTGGTGAGTATTTCTCTGAACAATCCCGCAATGTGGGGATGGC
GGAGGTTTCGCTGATCCCGGATTCAGCACTGTTGGGGAAAAATTTGCGTGAGGTGGCCTTTCGCAGCCGTTATGGTTTGA
ACGTGGTGGGGATCCGCCGCAACGGTAAGACCTTAGAAGGCAAGTTGGTTGATGACAAGTTACAGTTTGGCGATATTTTG
CTGGTGATCGGCGATTGGAAATTGATTCGCCAGTTACAGTTAAAAACCCGCGATTTTATTGTTCTGAACCTGCCCGCAGA
AGTTGATGAAGTTGCGCCAGCCATTTCGCAGGCTCCCCATGCGCTATTCTGCCTGGCGCTCATGGTTGCCATGATGCTGA
CTGACGAAGTCCCGAATGTCATTGCCGCGCTGGTGGCCTGTCTGTTGATGGGGCAGTTCCGGTGTATCGATATGGAAAGT
GCCTACCGTTCAATCCATTGGCCGAGTTTGATTCTGATTATCGGGATGATGCCTTTCGCCCAGGCATTGCAGAAAACCGG
TGGGGTAGATTTGATTGTTCGCGGACTAATGGATGTCGCGGGTGGAATGGGGCCAAGGGTGATGCTGCTGTGCTTATTTG
TACTGTGTGCGACGATTGGGCTGTTTATCTCTAATACCGCCACCGCCGTATTAATGGCACCAATTGCTATTGCGACCGCC
CGTGAGATGGCGCTTTCCCCATATCCCTTCGCCATGATTATTGGTATCGCCGCGTCAGCTGCTTTTATGACGCCAGTATC
TTCGCCGGTGAATACATTGGTCTTAGGCCCCGGGGGTTATAAATTCGGTGATTTCGTCCGTATGGGGGTGCCGTTTACTG
TACTGGTCATGATCGTCAGTGTGATGGTGGTTCCCTTACTATTCCCATTCTGA

Upstream 100 bases:

>100_bases
TTTCTTTGCAGAATATCTTACTATTAATGCGGTCTTGGGATAGTAAGCGCATAAATTTGCAGTCATTATTGATCTCAGAC
AGCGGCCCTCGGTAAATTTA

Downstream 100 bases:

>100_bases
TTACCCGATCTCCGTAGTACTTCAAGTTGCCGGTGTGTTGGCTGTCTTCGTTACTTGGCCCATCCGTGGGCCTCGCCTCT
TGTATTGCAGTTATGGTTGG

Product: ion transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 630; Mature: 630

Protein sequence:

>630_residues
MFYCQSRIFSFTFCFANEAILNSELLWVLTLLLIAIVLFTTNKLRMDVVALLVIIAFVMSGTLSLSEATSGFSDPNVILI
AALFVIGEGLVRTGVAYQMGDWLVKVAGHSETKMLALLMVTVAGLGAFMSSTGVVAIFIPVVLSVASRMKISPGRLMMPL
SFAGLISGMMTLVATPPNMVVNSELVREGIKGFGFFGVTPIGIIILFMGVAYMLVARRWLGGKQEHTEKDQWKRRTFRDL
IRDYKLTGRARRLAIRHGSPLIGRSLDELHLRARYGANVVGIERWRRFRRVMVSATGSSELRENDVLLIDMSDCDMDLRE
FCSEQMLEPLVLRGEYFSEQSRNVGMAEVSLIPDSALLGKNLREVAFRSRYGLNVVGIRRNGKTLEGKLVDDKLQFGDIL
LVIGDWKLIRQLQLKTRDFIVLNLPAEVDEVAPAISQAPHALFCLALMVAMMLTDEVPNVIAALVACLLMGQFRCIDMES
AYRSIHWPSLILIIGMMPFAQALQKTGGVDLIVRGLMDVAGGMGPRVMLLCLFVLCATIGLFISNTATAVLMAPIAIATA
REMALSPYPFAMIIGIAASAAFMTPVSSPVNTLVLGPGGYKFGDFVRMGVPFTVLVMIVSVMVVPLLFPF

Sequences:

>Translated_630_residues
MFYCQSRIFSFTFCFANEAILNSELLWVLTLLLIAIVLFTTNKLRMDVVALLVIIAFVMSGTLSLSEATSGFSDPNVILI
AALFVIGEGLVRTGVAYQMGDWLVKVAGHSETKMLALLMVTVAGLGAFMSSTGVVAIFIPVVLSVASRMKISPGRLMMPL
SFAGLISGMMTLVATPPNMVVNSELVREGIKGFGFFGVTPIGIIILFMGVAYMLVARRWLGGKQEHTEKDQWKRRTFRDL
IRDYKLTGRARRLAIRHGSPLIGRSLDELHLRARYGANVVGIERWRRFRRVMVSATGSSELRENDVLLIDMSDCDMDLRE
FCSEQMLEPLVLRGEYFSEQSRNVGMAEVSLIPDSALLGKNLREVAFRSRYGLNVVGIRRNGKTLEGKLVDDKLQFGDIL
LVIGDWKLIRQLQLKTRDFIVLNLPAEVDEVAPAISQAPHALFCLALMVAMMLTDEVPNVIAALVACLLMGQFRCIDMES
AYRSIHWPSLILIIGMMPFAQALQKTGGVDLIVRGLMDVAGGMGPRVMLLCLFVLCATIGLFISNTATAVLMAPIAIATA
REMALSPYPFAMIIGIAASAAFMTPVSSPVNTLVLGPGGYKFGDFVRMGVPFTVLVMIVSVMVVPLLFPF
>Mature_630_residues
MFYCQSRIFSFTFCFANEAILNSELLWVLTLLLIAIVLFTTNKLRMDVVALLVIIAFVMSGTLSLSEATSGFSDPNVILI
AALFVIGEGLVRTGVAYQMGDWLVKVAGHSETKMLALLMVTVAGLGAFMSSTGVVAIFIPVVLSVASRMKISPGRLMMPL
SFAGLISGMMTLVATPPNMVVNSELVREGIKGFGFFGVTPIGIIILFMGVAYMLVARRWLGGKQEHTEKDQWKRRTFRDL
IRDYKLTGRARRLAIRHGSPLIGRSLDELHLRARYGANVVGIERWRRFRRVMVSATGSSELRENDVLLIDMSDCDMDLRE
FCSEQMLEPLVLRGEYFSEQSRNVGMAEVSLIPDSALLGKNLREVAFRSRYGLNVVGIRRNGKTLEGKLVDDKLQFGDIL
LVIGDWKLIRQLQLKTRDFIVLNLPAEVDEVAPAISQAPHALFCLALMVAMMLTDEVPNVIAALVACLLMGQFRCIDMES
AYRSIHWPSLILIIGMMPFAQALQKTGGVDLIVRGLMDVAGGMGPRVMLLCLFVLCATIGLFISNTATAVLMAPIAIATA
REMALSPYPFAMIIGIAASAAFMTPVSSPVNTLVLGPGGYKFGDFVRMGVPFTVLVMIVSVMVVPLLFPF

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=610, Percent_Identity=71.6393442622951, Blast_Score=897, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004680
- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF03600 CitMHS; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 69134; Mature: 69134

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: PS01271 NA_SULFATE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYCQSRIFSFTFCFANEAILNSELLWVLTLLLIAIVLFTTNKLRMDVVALLVIIAFVMS
CCEEHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
GTLSLSEATSGFSDPNVILIAALFVIGEGLVRTGVAYQMGDWLVKVAGHSETKMLALLMV
CCCCHHHHCCCCCCCCHHHHHHHHHHCCHHHHHCCHHHHCCHHEEECCCCHHHHHHHHHH
TVAGLGAFMSSTGVVAIFIPVVLSVASRMKISPGRLMMPLSFAGLISGMMTLVATPPNMV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCHH
VNSELVREGIKGFGFFGVTPIGIIILFMGVAYMLVARRWLGGKQEHTEKDQWKRRTFRDL
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
IRDYKLTGRARRLAIRHGSPLIGRSLDELHLRARYGANVVGIERWRRFRRVMVSATGSSE
HHHHHHCCHHHEEEEECCCCHHCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCC
LRENDVLLIDMSDCDMDLREFCSEQMLEPLVLRGEYFSEQSRNVGMAEVSLIPDSALLGK
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEECCCHHHHHC
NLREVAFRSRYGLNVVGIRRNGKTLEGKLVDDKLQFGDILLVIGDWKLIRQLQLKTRDFI
HHHHHHHHHCCCCEEEEEECCCCEEECEEECCCCCCCCEEEEECCHHHHHHHHHCCCCEE
VLNLPAEVDEVAPAISQAPHALFCLALMVAMMLTDEVPNVIAALVACLLMGQFRCIDMES
EEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHH
AYRSIHWPSLILIIGMMPFAQALQKTGGVDLIVRGLMDVAGGMGPRVMLLCLFVLCATIG
HHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LFISNTATAVLMAPIAIATAREMALSPYPFAMIIGIAASAAFMTPVSSPVNTLVLGPGGY
HHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCC
KFGDFVRMGVPFTVLVMIVSVMVVPLLFPF
CHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFYCQSRIFSFTFCFANEAILNSELLWVLTLLLIAIVLFTTNKLRMDVVALLVIIAFVMS
CCEEHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
GTLSLSEATSGFSDPNVILIAALFVIGEGLVRTGVAYQMGDWLVKVAGHSETKMLALLMV
CCCCHHHHCCCCCCCCHHHHHHHHHHCCHHHHHCCHHHHCCHHEEECCCCHHHHHHHHHH
TVAGLGAFMSSTGVVAIFIPVVLSVASRMKISPGRLMMPLSFAGLISGMMTLVATPPNMV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCHH
VNSELVREGIKGFGFFGVTPIGIIILFMGVAYMLVARRWLGGKQEHTEKDQWKRRTFRDL
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
IRDYKLTGRARRLAIRHGSPLIGRSLDELHLRARYGANVVGIERWRRFRRVMVSATGSSE
HHHHHHCCHHHEEEEECCCCHHCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCC
LRENDVLLIDMSDCDMDLREFCSEQMLEPLVLRGEYFSEQSRNVGMAEVSLIPDSALLGK
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEECCCHHHHHC
NLREVAFRSRYGLNVVGIRRNGKTLEGKLVDDKLQFGDILLVIGDWKLIRQLQLKTRDFI
HHHHHHHHHCCCCEEEEEECCCCEEECEEECCCCCCCCEEEEECCHHHHHHHHHCCCCEE
VLNLPAEVDEVAPAISQAPHALFCLALMVAMMLTDEVPNVIAALVACLLMGQFRCIDMES
EEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHH
AYRSIHWPSLILIIGMMPFAQALQKTGGVDLIVRGLMDVAGGMGPRVMLLCLFVLCATIG
HHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LFISNTATAVLMAPIAIATAREMALSPYPFAMIIGIAASAAFMTPVSSPVNTLVLGPGGY
HHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCC
KFGDFVRMGVPFTVLVMIVSVMVVPLLFPF
CHHHHHHHCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]