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The map label for this gene is yceD [H]

Identifier: 108812197

GI number: 108812197

Start: 2296778

End: 2297302

Strand: Reverse

Name: yceD [H]

Synonym: YPN_2035

Alternate gene names: 108812197

Gene position: 2297302-2296778 (Counterclockwise)

Preceding gene: 108812199

Following gene: 108812196

Centisome position: 50.66

GC content: 46.1

Gene sequence:

>525_bases
ATGCAAAAGGTAAAATTACCCCTGACCATTGATGCGGTCCGTACCGCTCAGAAACGTTTAGATTACGCAGGTATCTATTC
GCCTGAGCAGGTTACACGAGTGGCCGACTCTGTGGTAAGTGTGGACAGCGATGTCGTGGCCTCATTATCGTTTAATATTG
ATAATCAGCGTCTGGCGGTTATTACAGGTCATGCAGACGTCGATGTAACATTGATGTGTCAGCGCTGTAATGGCACGTTT
GCACACCATGTTCATACAACGTATTGTTTCAGCCCGATCGTCAATGATGAGCAGGCTGAAGCATTACCGGAAGCGTACGA
GCCGATCGAAGTCGATGAATTTGGCGAAGTCGATCTGCTGGCTATGATTGAAGACGAAATTATTCTTTCACTGCCTGTCG
TTCCGGTACATGATTCTGAACACTGTGAAGTGTCCGAGGCGGACATGGTATTTGGTAAACTGCCTGCAGAGGTAGAGAAA
CCCAATCCATTTGCCGTATTAGCCAGTTTAAAGAAAAGTAATTAA

Upstream 100 bases:

>100_bases
TAAACTGTTCGCCGCTTCGGAAGCGAATATTGGTGAAAGGTGCAGTAAAACGGCCTTTTTCTTTGACTCTATGTCGTTAC
AAAGTTAATATGCGCGCCCT

Downstream 100 bases:

>100_bases
GGAGTAAGGTCAATGGCCGTACAACAGAACAAACCAACTCGTTCCAAACGTGGCATGCGCCGTTCACACGATGCACTGAC
CACTGCCACGCTGTCTGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: G30K [H]

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MQKVKLPLTIDAVRTAQKRLDYAGIYSPEQVTRVADSVVSVDSDVVASLSFNIDNQRLAVITGHADVDVTLMCQRCNGTF
AHHVHTTYCFSPIVNDEQAEALPEAYEPIEVDEFGEVDLLAMIEDEIILSLPVVPVHDSEHCEVSEADMVFGKLPAEVEK
PNPFAVLASLKKSN

Sequences:

>Translated_174_residues
MQKVKLPLTIDAVRTAQKRLDYAGIYSPEQVTRVADSVVSVDSDVVASLSFNIDNQRLAVITGHADVDVTLMCQRCNGTF
AHHVHTTYCFSPIVNDEQAEALPEAYEPIEVDEFGEVDLLAMIEDEIILSLPVVPVHDSEHCEVSEADMVFGKLPAEVEK
PNPFAVLASLKKSN
>Mature_174_residues
MQKVKLPLTIDAVRTAQKRLDYAGIYSPEQVTRVADSVVSVDSDVVASLSFNIDNQRLAVITGHADVDVTLMCQRCNGTF
AHHVHTTYCFSPIVNDEQAEALPEAYEPIEVDEFGEVDLLAMIEDEIILSLPVVPVHDSEHCEVSEADMVFGKLPAEVEK
PNPFAVLASLKKSN

Specific function: Unknown

COG id: COG1399

COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0159 [H]

Homologues:

Organism=Escherichia coli, GI1787329, Length=173, Percent_Identity=79.1907514450867, Blast_Score=287, Evalue=2e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003772 [H]

Pfam domain/function: PF02620 DUF177 [H]

EC number: NA

Molecular weight: Translated: 19124; Mature: 19124

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKVKLPLTIDAVRTAQKRLDYAGIYSPEQVTRVADSVVSVDSDVVASLSFNIDNQRLAV
CCEEECCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEE
ITGHADVDVTLMCQRCNGTFAHHVHTTYCFSPIVNDEQAEALPEAYEPIEVDEFGEVDLL
EECCCCCEEEEEEECCCCCEEHHEEEEEEECCCCCCHHHHHCHHHCCCCCCCCCCCEEEE
AMIEDEIILSLPVVPVHDSEHCEVSEADMVFGKLPAEVEKPNPFAVLASLKKSN
EEECCCEEEEECCEECCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCCC
>Mature Secondary Structure
MQKVKLPLTIDAVRTAQKRLDYAGIYSPEQVTRVADSVVSVDSDVVASLSFNIDNQRLAV
CCEEECCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEE
ITGHADVDVTLMCQRCNGTFAHHVHTTYCFSPIVNDEQAEALPEAYEPIEVDEFGEVDLL
EECCCCCEEEEEEECCCCCEEHHEEEEEEECCCCCCHHHHHCHHHCCCCCCCCCCCEEEE
AMIEDEIILSLPVVPVHDSEHCEVSEADMVFGKLPAEVEKPNPFAVLASLKKSN
EEECCCEEEEECCEECCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]