| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is 108812172
Identifier: 108812172
GI number: 108812172
Start: 2274423
End: 2274836
Strand: Reverse
Name: 108812172
Synonym: YPN_2010
Alternate gene names: NA
Gene position: 2274836-2274423 (Counterclockwise)
Preceding gene: 108812173
Following gene: 108812171
Centisome position: 50.17
GC content: 32.61
Gene sequence:
>414_bases ATGAAAAAAGTAGCTATAATTTTTATCGTGTTAATATTAATTGTGGCATTGCCAATGATATATTTTTGGCCGACGATAAA AGTATTAACGGGAGGGAATTCACGTTATACCGAACAGGATAAAAAACACTATCAATTACTCACAGATGAGATAATAAAGA ATTGTCCTCGTATATCATCGAATTATGAATTTGGTTATGCAACGGTGGATGGGCCTGGTATAGAGGTTAGTGCAGTTACA TTTCATGGTTCTAATGATATTGAAAAAATTCATAATTACTTATATTCAATAGGTTTTACATTAGATCGTACTGAGGATAG TGGTGAATATTGGAAATCTGAACGTTCAGATAAAACAGTACATATCGGGGTTATAAATAGTCCCAAGACGACCATAGTTG AAGTAATGAAATAG
Upstream 100 bases:
>100_bases CAAACAGTAATACCTTACAATAATTTCAAATCGGGAAATGTGGGGATTGCCTCACAAGATGGTGTTGAAGTTGATACCCA TTTCTTAGGATAGTCGTACA
Downstream 100 bases:
>100_bases AAGCATTTATTCGGCCCTGTCACTGAGACTGTAAACAATATTGTGTAATTGCCTGTTTTTGATATCTTCACTCCAACAAC GGAGACAGGCAAATTATGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MKKVAIIFIVLILIVALPMIYFWPTIKVLTGGNSRYTEQDKKHYQLLTDEIIKNCPRISSNYEFGYATVDGPGIEVSAVT FHGSNDIEKIHNYLYSIGFTLDRTEDSGEYWKSERSDKTVHIGVINSPKTTIVEVMK
Sequences:
>Translated_137_residues MKKVAIIFIVLILIVALPMIYFWPTIKVLTGGNSRYTEQDKKHYQLLTDEIIKNCPRISSNYEFGYATVDGPGIEVSAVT FHGSNDIEKIHNYLYSIGFTLDRTEDSGEYWKSERSDKTVHIGVINSPKTTIVEVMK >Mature_137_residues MKKVAIIFIVLILIVALPMIYFWPTIKVLTGGNSRYTEQDKKHYQLLTDEIIKNCPRISSNYEFGYATVDGPGIEVSAVT FHGSNDIEKIHNYLYSIGFTLDRTEDSGEYWKSERSDKTVHIGVINSPKTTIVEVMK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15606; Mature: 15606
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVAIIFIVLILIVALPMIYFWPTIKVLTGGNSRYTEQDKKHYQLLTDEIIKNCPRISS CCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCC NYEFGYATVDGPGIEVSAVTFHGSNDIEKIHNYLYSIGFTLDRTEDSGEYWKSERSDKTV CCCEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHCCEEECCCCCCHHHHCCCCCCEE HIGVINSPKTTIVEVMK EEEEECCCCHHHHEECC >Mature Secondary Structure MKKVAIIFIVLILIVALPMIYFWPTIKVLTGGNSRYTEQDKKHYQLLTDEIIKNCPRISS CCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCC NYEFGYATVDGPGIEVSAVTFHGSNDIEKIHNYLYSIGFTLDRTEDSGEYWKSERSDKTV CCCEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHCCEEECCCCCCHHHHCCCCCCEE HIGVINSPKTTIVEVMK EEEEECCCCHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA