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The map label for this gene is baeR [H]

Identifier: 108811448

GI number: 108811448

Start: 1459471

End: 1460190

Strand: Reverse

Name: baeR [H]

Synonym: YPN_1285

Alternate gene names: 108811448

Gene position: 1460190-1459471 (Counterclockwise)

Preceding gene: 108811449

Following gene: 108811447

Centisome position: 32.2

GC content: 53.06

Gene sequence:

>720_bases
ATGCACGAGTCGCCTCTGTCTGCCAGCCAGTCTGGCTCTGTATTGATCGTTGAAGATGAACCCAAACTTGGCCAGCTACT
CGTCGATTACCTGCAAGCCGCGGGTTACCGCACCCAGTGGCTGACCAACGGGGCAGAAGTCGTGGCGACGGTTCGCCAAA
CGCCACCCGCCATCATCTTGCTGGATCTCATGCTGCCCGGCAGTGATGGCATCACCCTATGCCGTGAAATCCGCCGTTTC
TCTGATATTCCTATTGTCATGGTGACGGCAAAAACGGAAGAGATTGATAGGCTATTGGGGCTGGAGATTGGCGCTGATGA
CTATATCTGCAAGCCCTATAGCCCACGGGAAGTGGTCGCTCGGGTCAAAACCATTCTACGCCGCTGCTCTCAGCAACGTC
ATCAACCCACCGATGACGCACCACTGCTGATCAATGAATCCCGTTTTCAGGCGAGTTACCAAGGGCATATGCTGGAATTA
ACCCCGGCAGAATTCCGCTTACTGAAAATATTAGCCTCCCAACCGGGCCATGTTTTCAGCCGGGAACAACTGCTGAACAA
CCTTTACGACGATTACCGGGTAGTGACTGATCGCACCATTGACAGCCATATCAAAAATCTACGGCGGAAACTGGAATTAC
TCGATGGCGAAAAACCGTTCATCCGCGCGGTATATGGCATGGGGTATCGCTGGGAAGCAGAGATGTGCCGTTTGTTGTAA

Upstream 100 bases:

>100_bases
TGCGCATAGTGGAAAAATCAGCGCTAAACATTCACCTTTGGGTGGCCTGCGGATTACGGTAGTATTCCCCCTATTTCATT
CCATAGGGTAATCCATTGTA

Downstream 100 bases:

>100_bases
TTCTGTTTTTGCCATAGGTGCGCTATGTTGGCGGTGTTAGCTCGTTATGTTTGCGATGCACGGAGCACATTGACCTGACT
TCCGGTCAACCTTGACTACA

Product: DNA-binding transcriptional regulator BaeR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MHESPLSASQSGSVLIVEDEPKLGQLLVDYLQAAGYRTQWLTNGAEVVATVRQTPPAIILLDLMLPGSDGITLCREIRRF
SDIPIVMVTAKTEEIDRLLGLEIGADDYICKPYSPREVVARVKTILRRCSQQRHQPTDDAPLLINESRFQASYQGHMLEL
TPAEFRLLKILASQPGHVFSREQLLNNLYDDYRVVTDRTIDSHIKNLRRKLELLDGEKPFIRAVYGMGYRWEAEMCRLL

Sequences:

>Translated_239_residues
MHESPLSASQSGSVLIVEDEPKLGQLLVDYLQAAGYRTQWLTNGAEVVATVRQTPPAIILLDLMLPGSDGITLCREIRRF
SDIPIVMVTAKTEEIDRLLGLEIGADDYICKPYSPREVVARVKTILRRCSQQRHQPTDDAPLLINESRFQASYQGHMLEL
TPAEFRLLKILASQPGHVFSREQLLNNLYDDYRVVTDRTIDSHIKNLRRKLELLDGEKPFIRAVYGMGYRWEAEMCRLL
>Mature_239_residues
MHESPLSASQSGSVLIVEDEPKLGQLLVDYLQAAGYRTQWLTNGAEVVATVRQTPPAIILLDLMLPGSDGITLCREIRRF
SDIPIVMVTAKTEEIDRLLGLEIGADDYICKPYSPREVVARVKTILRRCSQQRHQPTDDAPLLINESRFQASYQGHMLEL
TPAEFRLLKILASQPGHVFSREQLLNNLYDDYRVVTDRTIDSHIKNLRRKLELLDGEKPFIRAVYGMGYRWEAEMCRLL

Specific function: Member of the two-component regulatory system BaeS/BaeR. Activates the mdtABCD operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788394, Length=241, Percent_Identity=74.2738589211618, Blast_Score=361, Evalue=1e-101,
Organism=Escherichia coli, GI1790860, Length=227, Percent_Identity=40.9691629955947, Blast_Score=165, Evalue=2e-42,
Organism=Escherichia coli, GI1786599, Length=222, Percent_Identity=39.1891891891892, Blast_Score=155, Evalue=2e-39,
Organism=Escherichia coli, GI1789809, Length=225, Percent_Identity=36.4444444444444, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI2367329, Length=224, Percent_Identity=38.3928571428571, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1789402, Length=217, Percent_Identity=33.6405529953917, Blast_Score=130, Evalue=6e-32,
Organism=Escherichia coli, GI1787229, Length=233, Percent_Identity=36.480686695279, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1790863, Length=232, Percent_Identity=32.7586206896552, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1786911, Length=231, Percent_Identity=34.6320346320346, Blast_Score=114, Evalue=4e-27,
Organism=Escherichia coli, GI1790552, Length=218, Percent_Identity=33.9449541284404, Blast_Score=114, Evalue=4e-27,
Organism=Escherichia coli, GI1786784, Length=225, Percent_Identity=32.8888888888889, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1787375, Length=222, Percent_Identity=31.981981981982, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI87082012, Length=220, Percent_Identity=30, Blast_Score=101, Evalue=6e-23,
Organism=Escherichia coli, GI145693140, Length=231, Percent_Identity=29.8701298701299, Blast_Score=100, Evalue=7e-23,
Organism=Escherichia coli, GI1790299, Length=130, Percent_Identity=30.7692307692308, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 27237; Mature: 27237

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHESPLSASQSGSVLIVEDEPKLGQLLVDYLQAAGYRTQWLTNGAEVVATVRQTPPAIIL
CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHCCCCEEEE
LDLMLPGSDGITLCREIRRFSDIPIVMVTAKTEEIDRLLGLEIGADDYICKPYSPREVVA
EEEECCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCEECCCCCEECCCCHHHHHH
RVKTILRRCSQQRHQPTDDAPLLINESRFQASYQGHMLELTPAEFRLLKILASQPGHVFS
HHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHCCCEEEECHHHHHHHHHHHCCCCCHHH
REQLLNNLYDDYRVVTDRTIDSHIKNLRRKLELLDGEKPFIRAVYGMGYRWEAEMCRLL
HHHHHHHHHHHHEEHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEHHHHHHCC
>Mature Secondary Structure
MHESPLSASQSGSVLIVEDEPKLGQLLVDYLQAAGYRTQWLTNGAEVVATVRQTPPAIIL
CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHCCCCEEEE
LDLMLPGSDGITLCREIRRFSDIPIVMVTAKTEEIDRLLGLEIGADDYICKPYSPREVVA
EEEECCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCEECCCCCEECCCCHHHHHH
RVKTILRRCSQQRHQPTDDAPLLINESRFQASYQGHMLELTPAEFRLLKILASQPGHVFS
HHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHCCCEEEECHHHHHHHHHHHCCCCCHHH
REQLLNNLYDDYRVVTDRTIDSHIKNLRRKLELLDGEKPFIRAVYGMGYRWEAEMCRLL
HHHHHHHHHHHHEEHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]