Definition | Yersinia pestis Nepal516, complete genome. |
---|---|
Accession | NC_008149 |
Length | 4,534,590 |
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The map label for this gene is kdpC [H]
Identifier: 108811340
GI number: 108811340
Start: 1341120
End: 1341770
Strand: Reverse
Name: kdpC [H]
Synonym: YPN_1177
Alternate gene names: 108811340
Gene position: 1341770-1341120 (Counterclockwise)
Preceding gene: 108811341
Following gene: 108811339
Centisome position: 29.59
GC content: 51.61
Gene sequence:
>651_bases ATGTCATCGACAACATCTCCATTATCATCTGCATCGCCGACATCGGGCATGTCCTACCTACGGCCAGCGCTGGTTTTACT GATATTACTGACACTGATCACCGGGATAGCTTATCCTCTGCTCACCACCGGGTTAGCGCACTTGATGTTTTCACAGCAAG CCAGTGGTTCACTGGCGCGACTGGGCGATAACGTTGTTGGCTCCACTTTAATTGGTCAAAACTTTACTCAACCGGGTTAT TTTACTGGCCGCCCATCAGCCACCGCAGATAGGCCTTATAATCCAATGGCTTCAGGTGGCAGTAATTTGGCAAGCAGCAA CCCGGCACTGGGCCAGGCTATCGGCGAACGAGTTAAATTGCAGCGTCAGGCTAATCCCACCCAATTGGGTCCAGTACCGG TGGATTTAGTCACCGCCTCCGGCAGTGGTCTGGATCCCCATATTTCACTGGCAGCGGCTTATTATCAGGCACCGCGTATT GCCAGTATCCGTCAGATGCCGCTGTCTGATGTCCAGCAATTGATTGATAACAGTATGCAAAAAGCGATACCCAGTTTCTT TGGCGAGCCCGTCGTCAATGTGCTGAATTTAAATATGGCGCTGGATAGCCACAGCCACGTAAAAGTCCCCGCCAACCCGG CAAAACCGTAA
Upstream 100 bases:
>100_bases ATTACGACAGCCATGACCAAGGCGACAATAAACCGTTTAACCACAGCCATCGCACCCTGATGCGGTGGCCGGTTTTAAGA CACAAATTGAGGCAATATTT
Downstream 100 bases:
>100_bases GGAACGATCATGGTGGATGCAGAACCAACCCGTCCGAACCCCGATAGCCTGTTAGCCGTGGCGAATGAAAAACCTCGTGG CCGGTTAAAAGTCTTTTTTG
Product: potassium-transporting ATPase subunit C
Products: NA
Alternate protein names: ATP phosphohydrolase [potassium-transporting] C chain; Potassium-binding and translocating subunit C; Potassium-translocating ATPase C chain [H]
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MSSTTSPLSSASPTSGMSYLRPALVLLILLTLITGIAYPLLTTGLAHLMFSQQASGSLARLGDNVVGSTLIGQNFTQPGY FTGRPSATADRPYNPMASGGSNLASSNPALGQAIGERVKLQRQANPTQLGPVPVDLVTASGSGLDPHISLAAAYYQAPRI ASIRQMPLSDVQQLIDNSMQKAIPSFFGEPVVNVLNLNMALDSHSHVKVPANPAKP
Sequences:
>Translated_216_residues MSSTTSPLSSASPTSGMSYLRPALVLLILLTLITGIAYPLLTTGLAHLMFSQQASGSLARLGDNVVGSTLIGQNFTQPGY FTGRPSATADRPYNPMASGGSNLASSNPALGQAIGERVKLQRQANPTQLGPVPVDLVTASGSGLDPHISLAAAYYQAPRI ASIRQMPLSDVQQLIDNSMQKAIPSFFGEPVVNVLNLNMALDSHSHVKVPANPAKP >Mature_215_residues SSTTSPLSSASPTSGMSYLRPALVLLILLTLITGIAYPLLTTGLAHLMFSQQASGSLARLGDNVVGSTLIGQNFTQPGYF TGRPSATADRPYNPMASGGSNLASSNPALGQAIGERVKLQRQANPTQLGPVPVDLVTASGSGLDPHISLAAAYYQAPRIA SIRQMPLSDVQQLIDNSMQKAIPSFFGEPVVNVLNLNMALDSHSHVKVPANPAKP
Specific function: One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex [H]
COG id: COG2156
COG function: function code P; K+-transporting ATPase, c chain
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the kdpC family [H]
Homologues:
Organism=Escherichia coli, GI1786913, Length=187, Percent_Identity=56.6844919786096, Blast_Score=187, Evalue=4e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003820 [H]
Pfam domain/function: PF02669 KdpC [H]
EC number: =3.6.3.12 [H]
Molecular weight: Translated: 22548; Mature: 22417
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTTSPLSSASPTSGMSYLRPALVLLILLTLITGIAYPLLTTGLAHLMFSQQASGSLAR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LGDNVVGSTLIGQNFTQPGYFTGRPSATADRPYNPMASGGSNLASSNPALGQAIGERVKL HCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH QRQANPTQLGPVPVDLVTASGSGLDPHISLAAAYYQAPRIASIRQMPLSDVQQLIDNSMQ HHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHH KAIPSFFGEPVVNVLNLNMALDSHSHVKVPANPAKP HHHHHHHCCHHHHHHHHHHEECCCCEEECCCCCCCC >Mature Secondary Structure SSTTSPLSSASPTSGMSYLRPALVLLILLTLITGIAYPLLTTGLAHLMFSQQASGSLAR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LGDNVVGSTLIGQNFTQPGYFTGRPSATADRPYNPMASGGSNLASSNPALGQAIGERVKL HCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH QRQANPTQLGPVPVDLVTASGSGLDPHISLAAAYYQAPRIASIRQMPLSDVQQLIDNSMQ HHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHH KAIPSFFGEPVVNVLNLNMALDSHSHVKVPANPAKP HHHHHHHCCHHHHHHHHHHEECCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA