Definition | Yersinia pestis Nepal516, complete genome. |
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Accession | NC_008149 |
Length | 4,534,590 |
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The map label for this gene is lnt [H]
Identifier: 108811265
GI number: 108811265
Start: 1264410
End: 1265996
Strand: Reverse
Name: lnt [H]
Synonym: YPN_1101
Alternate gene names: 108811265
Gene position: 1265996-1264410 (Counterclockwise)
Preceding gene: 108811266
Following gene: 108811264
Centisome position: 27.92
GC content: 50.85
Gene sequence:
>1587_bases ATGATGCTCCGCAACCTAAACTGGAAGAATAAATTCTTGATGTCTATTGCTCTATTCCTCCAACGCCAGTGGGTTCGCGC CCTACTGGCGCTATTTTTTGGTGCCTGTGGCACGCTTGCTTACTCGCCGTTTGATCATTGGCCTGCCGCCATTGTTTCAC TATTCGGTTTGCTCAGTCTGACGTTGAACCGCACCACCAAACAAGCCACCTTCATTGGTTTTTGTTGGGGGATGGGGCTA TTTGGCAGTGGCATCAACTGGGTGTATGTCAGCATCTCCGAATTTGGGGGTATGCCAACGGCAATCAATATCGTCCTCGT CATCTTGCTAGCAGCATATTTATCACTCTACACCATGCTATTCGCCGGTTTATTAGCCCGCCTGTGCCCTAAGGCTACCT GGTGGCGGCTCGCGATTGCGGCCCCGGTACTCTGGCAATTAACTGAATTCCTACGTGGCTGGGTATTAACGGGTTTCCCG TGGTTACAATTCGGCTACAGCCAAATTAACGGCCCTCTGCGAGGGATAGCTCCCCTCCTCGGTGTTGATGGCATCACATT TATCTTGATGGCTATCAGTGGCTTGCTGGTCTACGCCTGCTATCAACGTCGTATTGTCGCAGCAATTATCGCGCTGGCCT TACTGCTGCTGCCCTGGCCACTGCGCCAAATACAGTGGTTCACACCAGAGCCTGAAAGAGCAGTCAATATCGCCATGGTA CAAGGCAATATTGCTCAGTCAATGAAGTGGGATCCCAAAGCCCTGATCACCACATTGCAAATTTATCTTGATGAAACCCG GCCATTTATGGGCAAAGCCCCCATTATTATCTGGCCAGAATCAGCTATTCCCGATATTGAAACCGATCAGAACACCTTCC TGACAATGATAGATGGCCTGATGCGGGCAAATCATAGCAGCCTGATCACCGGCATTGTAGATGCCAAGCGGCAACCCGAG GGGCAAGGGTATCAATTCTTTAACAGCATCATTGTGTTAGGCGATAAAGATACCTATCAATACCCGACCCGCAACCGTTA TAGCAAACATCACTTGGTGCCCTTCGGTGAGTACGTACCGCTCGAGTCCCTACTGCGCCCGCTGGCTCCGTTATTTAATT TACCCATGTCTTCATTTAACCGGGGTGATTATGTTCAACCCCCACTCACTATCGCTGGATTTAACCTCACGGCGGCTATT TGTTATGAAATCGTCTTGGGCCAGCAAGTACGGGATAACTTCCGCCCTGAAACAGATTTTCTACTGACTATCTCCAATGA TGCCTGGTTTGGTCACTCCATTGGGCCGTGGCAACATTTCCAAATGGCACGTATGCGCGCACTGGAGCTGGGCCGCCCGC TACTGCGCAGCACCAATAATGGCATTACTGCCGCTATTGGCCCAAGTGGTGAAATTCTGGCGCAGATCCCACAGTTCACT CAACAGGTTCTAGAGGTCAAGGTCACCCCAACCACCGGTATCACGCCATATGCCCGTTTTGGCTCATGGCCAATGTGGAT TATTACTCTGGTTTTGGGCGCCTTTACCCTGTACTGCGCAATCCGGGGGCGCTCTGATAAGCACTAA
Upstream 100 bases:
>100_bases TTACCTGCCCGTGGTGAAACGATTGAAATTGAAGGTTACTTATTTAAAGTTGCCATGGCAGATAGTCGACGTATCATTCA GGTTCATGTAAAAATCCCGG
Downstream 100 bases:
>100_bases TTTATGATCAGTACTAATTGATGATAAGCCTTGGTCAACTTGCCATAAACATTGGCTAACCTGTTATAAAAACGGGCTAA TTTGCTATAAGCATCGATAG
Product: apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: ALP N-acyltransferase [H]
Number of amino acids: Translated: 528; Mature: 528
Protein sequence:
>528_residues MMLRNLNWKNKFLMSIALFLQRQWVRALLALFFGACGTLAYSPFDHWPAAIVSLFGLLSLTLNRTTKQATFIGFCWGMGL FGSGINWVYVSISEFGGMPTAINIVLVILLAAYLSLYTMLFAGLLARLCPKATWWRLAIAAPVLWQLTEFLRGWVLTGFP WLQFGYSQINGPLRGIAPLLGVDGITFILMAISGLLVYACYQRRIVAAIIALALLLLPWPLRQIQWFTPEPERAVNIAMV QGNIAQSMKWDPKALITTLQIYLDETRPFMGKAPIIIWPESAIPDIETDQNTFLTMIDGLMRANHSSLITGIVDAKRQPE GQGYQFFNSIIVLGDKDTYQYPTRNRYSKHHLVPFGEYVPLESLLRPLAPLFNLPMSSFNRGDYVQPPLTIAGFNLTAAI CYEIVLGQQVRDNFRPETDFLLTISNDAWFGHSIGPWQHFQMARMRALELGRPLLRSTNNGITAAIGPSGEILAQIPQFT QQVLEVKVTPTTGITPYARFGSWPMWIITLVLGAFTLYCAIRGRSDKH
Sequences:
>Translated_528_residues MMLRNLNWKNKFLMSIALFLQRQWVRALLALFFGACGTLAYSPFDHWPAAIVSLFGLLSLTLNRTTKQATFIGFCWGMGL FGSGINWVYVSISEFGGMPTAINIVLVILLAAYLSLYTMLFAGLLARLCPKATWWRLAIAAPVLWQLTEFLRGWVLTGFP WLQFGYSQINGPLRGIAPLLGVDGITFILMAISGLLVYACYQRRIVAAIIALALLLLPWPLRQIQWFTPEPERAVNIAMV QGNIAQSMKWDPKALITTLQIYLDETRPFMGKAPIIIWPESAIPDIETDQNTFLTMIDGLMRANHSSLITGIVDAKRQPE GQGYQFFNSIIVLGDKDTYQYPTRNRYSKHHLVPFGEYVPLESLLRPLAPLFNLPMSSFNRGDYVQPPLTIAGFNLTAAI CYEIVLGQQVRDNFRPETDFLLTISNDAWFGHSIGPWQHFQMARMRALELGRPLLRSTNNGITAAIGPSGEILAQIPQFT QQVLEVKVTPTTGITPYARFGSWPMWIITLVLGAFTLYCAIRGRSDKH >Mature_528_residues MMLRNLNWKNKFLMSIALFLQRQWVRALLALFFGACGTLAYSPFDHWPAAIVSLFGLLSLTLNRTTKQATFIGFCWGMGL FGSGINWVYVSISEFGGMPTAINIVLVILLAAYLSLYTMLFAGLLARLCPKATWWRLAIAAPVLWQLTEFLRGWVLTGFP WLQFGYSQINGPLRGIAPLLGVDGITFILMAISGLLVYACYQRRIVAAIIALALLLLPWPLRQIQWFTPEPERAVNIAMV QGNIAQSMKWDPKALITTLQIYLDETRPFMGKAPIIIWPESAIPDIETDQNTFLTMIDGLMRANHSSLITGIVDAKRQPE GQGYQFFNSIIVLGDKDTYQYPTRNRYSKHHLVPFGEYVPLESLLRPLAPLFNLPMSSFNRGDYVQPPLTIAGFNLTAAI CYEIVLGQQVRDNFRPETDFLLTISNDAWFGHSIGPWQHFQMARMRALELGRPLLRSTNNGITAAIGPSGEILAQIPQFT QQVLEVKVTPTTGITPYARFGSWPMWIITLVLGAFTLYCAIRGRSDKH
Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]
COG id: COG0815
COG function: function code M; Apolipoprotein N-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1786878, Length=511, Percent_Identity=65.1663405088063, Blast_Score=700, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004563 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 59363; Mature: 59363
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLRNLNWKNKFLMSIALFLQRQWVRALLALFFGACGTLAYSPFDHWPAAIVSLFGLLSL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH TLNRTTKQATFIGFCWGMGLFGSGINWVYVSISEFGGMPTAINIVLVILLAAYLSLYTML HHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHH FAGLLARLCPKATWWRLAIAAPVLWQLTEFLRGWVLTGFPWLQFGYSQINGPLRGIAPLL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHH GVDGITFILMAISGLLVYACYQRRIVAAIIALALLLLPWPLRQIQWFTPEPERAVNIAMV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCEECCCCCCCCEEEEEE QGNIAQSMKWDPKALITTLQIYLDETRPFMGKAPIIIWPESAIPDIETDQNTFLTMIDGL ECCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHH MRANHSSLITGIVDAKRQPEGQGYQFFNSIIVLGDKDTYQYPTRNRYSKHHLVPFGEYVP HHCCCHHHHHHHHHHCCCCCCCCCEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC LESLLRPLAPLFNLPMSSFNRGDYVQPPLTIAGFNLTAAICYEIVLGQQVRDNFRPETDF HHHHHHHHHHHHHCCHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCE LLTISNDAWFGHSIGPWQHFQMARMRALELGRPLLRSTNNGITAAIGPSGEILAQIPQFT EEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCEEEEECCCHHHHHHHHHHH QQVLEVKVTPTTGITPYARFGSWPMWIITLVLGAFTLYCAIRGRSDKH HHHHEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MMLRNLNWKNKFLMSIALFLQRQWVRALLALFFGACGTLAYSPFDHWPAAIVSLFGLLSL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH TLNRTTKQATFIGFCWGMGLFGSGINWVYVSISEFGGMPTAINIVLVILLAAYLSLYTML HHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHH FAGLLARLCPKATWWRLAIAAPVLWQLTEFLRGWVLTGFPWLQFGYSQINGPLRGIAPLL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHH GVDGITFILMAISGLLVYACYQRRIVAAIIALALLLLPWPLRQIQWFTPEPERAVNIAMV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCEECCCCCCCCEEEEEE QGNIAQSMKWDPKALITTLQIYLDETRPFMGKAPIIIWPESAIPDIETDQNTFLTMIDGL ECCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHH MRANHSSLITGIVDAKRQPEGQGYQFFNSIIVLGDKDTYQYPTRNRYSKHHLVPFGEYVP HHCCCHHHHHHHHHHCCCCCCCCCEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC LESLLRPLAPLFNLPMSSFNRGDYVQPPLTIAGFNLTAAICYEIVLGQQVRDNFRPETDF HHHHHHHHHHHHHCCHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCE LLTISNDAWFGHSIGPWQHFQMARMRALELGRPLLRSTNNGITAAIGPSGEILAQIPQFT EEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCEEEEECCCHHHHHHHHHHH QQVLEVKVTPTTGITPYARFGSWPMWIITLVLGAFTLYCAIRGRSDKH HHHHEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]