Definition | Yersinia pestis Nepal516, complete genome. |
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Accession | NC_008149 |
Length | 4,534,590 |
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The map label for this gene is 108811156
Identifier: 108811156
GI number: 108811156
Start: 1148742
End: 1149353
Strand: Reverse
Name: 108811156
Synonym: YPN_0991
Alternate gene names: NA
Gene position: 1149353-1148742 (Counterclockwise)
Preceding gene: 108811157
Following gene: 108811128
Centisome position: 25.35
GC content: 50.0
Gene sequence:
>612_bases ATGTGGCTGGCAGAAAATGAAGGTGCGAAGTTCTGGCTAAGTGTGCTGACAGAGCTAAAAAATCGCGGTCTTCAGGACAT TCTGATTGCCTGCGTGGATGGCCTGAAGGGGTTCCCGGATGCGATAAACAGTGTTTATCCGCAGACTCACATCCAGCTGT GCATCATCCATATGGTACGCAACAGCCTGAAATATGTGTCATGGAAGGACTATAAAGCCGTCACCAGCGGTTTGAAAATG GTGTATCAGGCTCCGACAGAAGAGGCGGCGCTGATGGCGCTGGATAAGTTTGCGGAGGCCTGGGACGACAAATACCCGCA AATTAGCAAAAGTTGGCGTACGCACTGGGAAAATCTCAATACATTCTTCGGCTATCCGCCCGATATCCGCAAGGCTATCT ACACCACGAATGCCATCGAATCGGTGAACAGCGTGATCCGTGCAGCCATTAAAAAGCGCAAAGTGTTCCCGACAGACGAC TCAGTGCGGAAGGTTGTTTATTTGGCGATCAAGGATGCATCAAAAAAATGGAGTATGCCGATCCAGAACTGGCGGTTAGC GATGAGCCGTTTTATTATCGAGTTCGGTGACCGCCTGAGCGATCACCTTTAA
Upstream 100 bases:
>100_bases TGCATTGTCGTAAAAGTCCGCCAGAACGGTAGCGTGATAAACAAAGCAGTGTTCCTAGCGCTGGGCATCAACACCTGAAG GTCAGAAAGAGCTGCTGGGC
Downstream 100 bases:
>100_bases TACGGTGGCAGTTACACAGAATTATGGACAGGCTCTAGTTATTCGGTATTGGACTATCAAGGTTACTTCGTGCCTGTTTA TTACTCATTGAGTATTACCT
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDAINSVYPQTHIQLCIIHMVRNSLKYVSWKDYKAVTSGLKM VYQAPTEEAALMALDKFAEAWDDKYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAIESVNSVIRAAIKKRKVFPTDD SVRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRLSDHL
Sequences:
>Translated_203_residues MWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDAINSVYPQTHIQLCIIHMVRNSLKYVSWKDYKAVTSGLKM VYQAPTEEAALMALDKFAEAWDDKYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAIESVNSVIRAAIKKRKVFPTDD SVRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRLSDHL >Mature_203_residues MWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDAINSVYPQTHIQLCIIHMVRNSLKYVSWKDYKAVTSGLKM VYQAPTEEAALMALDKFAEAWDDKYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAIESVNSVIRAAIKKRKVFPTDD SVRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRLSDHL
Specific function: Required for the transposition of the insertion element [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 23463; Mature: 23463
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: PS01007 TRANSPOSASE_MUTATOR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDAINSVYPQTHIQLCIIHMVR CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHH NSLKYVSWKDYKAVTSGLKMVYQAPTEEAALMALDKFAEAWDDKYPQISKSWRTHWENLN HHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC TFFGYPPDIRKAIYTTNAIESVNSVIRAAIKKRKVFPTDDSVRKVVYLAIKDASKKWSMP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCC IQNWRLAMSRFIIEFGDRLSDHL HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDAINSVYPQTHIQLCIIHMVR CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHH NSLKYVSWKDYKAVTSGLKMVYQAPTEEAALMALDKFAEAWDDKYPQISKSWRTHWENLN HHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC TFFGYPPDIRKAIYTTNAIESVNSVIRAAIKKRKVFPTDDSVRKVVYLAIKDASKKWSMP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCC IQNWRLAMSRFIIEFGDRLSDHL HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1849509; 1327271; 11481430; 11481432 [H]