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The map label for this gene is rpmE2

Identifier: 108811121

GI number: 108811121

Start: 1109825

End: 1110085

Strand: Reverse

Name: rpmE2

Synonym: YPN_0956

Alternate gene names: 108811121

Gene position: 1110085-1109825 (Counterclockwise)

Preceding gene: 108811122

Following gene: 108811120

Centisome position: 24.48

GC content: 46.74

Gene sequence:

>261_bases
ATGAAGCCCAATATCCACCCTCCGTATCGGACTGTGGTATTTCACGATACCAGTGCGGATGCTTATTTTACTGTAGGTTC
AACCATTGCCACTGAGCGAACAATCGAACGCGATGGCCAGACGTACCCCTACGTCACATTAGATATCTCTTCAGCCTCGC
ATCCGTACTACACCGGTAAGCAAAAAGAGTTTGCTAAAGAAGGCAGTACCGCACGCTTCCACCAACGTTTCGGTAGTTTC
TTAACAAAGAAAACCAACTAA

Upstream 100 bases:

>100_bases
ACTCTACAAAAAATAGCAATGAAGAGTCATTTCGGGCTTGAAACTGGAAACAGTAAAACGCATAATGATGTTACATTATA
ACATACTAAAAGGAATCATT

Downstream 100 bases:

>100_bases
TTCGGAGAGTTAACCATGCAAGTATTAAGTTCATTACGTTCGGCAAAGAACCGCCATCCAGACTGCAAGATTGTCCGTCG
CCGTGGCCGAGTGTACGTAA

Product: 50S ribosomal protein L31 type B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MKPNIHPPYRTVVFHDTSADAYFTVGSTIATERTIERDGQTYPYVTLDISSASHPYYTGKQKEFAKEGSTARFHQRFGSF
LTKKTN

Sequences:

>Translated_86_residues
MKPNIHPPYRTVVFHDTSADAYFTVGSTIATERTIERDGQTYPYVTLDISSASHPYYTGKQKEFAKEGSTARFHQRFGSF
LTKKTN
>Mature_86_residues
MKPNIHPPYRTVVFHDTSADAYFTVGSTIATERTIERDGQTYPYVTLDISSASHPYYTGKQKEFAKEGSTARFHQRFGSF
LTKKTN

Specific function: Unknown

COG id: COG0254

COG function: function code J; Ribosomal protein L31

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31P family. Type B subfamily

Homologues:

Organism=Escherichia coli, GI2367109, Length=84, Percent_Identity=69.0476190476191, Blast_Score=126, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL31B_YERP3 (A7FLA1)

Other databases:

- EMBL:   CP000720
- RefSeq:   YP_001402029.1
- ProteinModelPortal:   A7FLA1
- SMR:   A7FLA1
- STRING:   A7FLA1
- GeneID:   5388077
- GenomeReviews:   CP000720_GR
- KEGG:   ypi:YpsIP31758_3069
- eggNOG:   COG0254
- HOGENOM:   HBG610087
- OMA:   YRTVLFH
- ProtClustDB:   PRK01678
- BioCyc:   YPSE349747:YPSIP31758_3069-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00502
- InterPro:   IPR002150
- PRINTS:   PR01249
- TIGRFAMs:   TIGR00105

Pfam domain/function: PF01197 Ribosomal_L31

EC number: NA

Molecular weight: Translated: 9795; Mature: 9795

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS01143 RIBOSOMAL_L31

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPNIHPPYRTVVFHDTSADAYFTVGSTIATERTIERDGQTYPYVTLDISSASHPYYTGK
CCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCC
QKEFAKEGSTARFHQRFGSFLTKKTN
CHHHHHCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKPNIHPPYRTVVFHDTSADAYFTVGSTIATERTIERDGQTYPYVTLDISSASHPYYTGK
CCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCC
QKEFAKEGSTARFHQRFGSFLTKKTN
CHHHHHCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA