Definition | Yersinia pestis Nepal516, complete genome. |
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Accession | NC_008149 |
Length | 4,534,590 |
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The map label for this gene is 108811119
Identifier: 108811119
GI number: 108811119
Start: 1108439
End: 1108792
Strand: Reverse
Name: 108811119
Synonym: YPN_0954
Alternate gene names: NA
Gene position: 1108792-1108439 (Counterclockwise)
Preceding gene: 108811120
Following gene: 108811118
Centisome position: 24.45
GC content: 32.2
Gene sequence:
>354_bases ATGAACAATGAAATAGTTGGTGACTTCGTTTCAGGGCATTACTCAGTTTCATTACTGAAAGACGTTATCCGTAATAATAT CCACTCAATTGAGGAAAGTTTGGTTTCTGGGTTAATGTATTATTCAGAAGATGCTCGGTACACACTTGGATCATTAGAAA TTCTTGAGATTAAAAATCTCAAAGAGAACCAGTATTCAATGACTTACCAATATAATTGGTATATTTTCAATGCTTGTTTG GATATCAATACTGAAGAATTTCTAACAAACACTGTAACATTTATTGTACATCCTGAAAAAATCGTTTTTGATATAATTAG TAATGACAGGCCTTCTCCTGCGGATGAATTGTAA
Upstream 100 bases:
>100_bases AAGTCATGTGAGTGATTGCTGAAATGCTAATATCCAAGCATTTTTCACAACAATTATAATGTCGTTGTGACGTATTTTTA CCCCGATGACTGGATGATTA
Downstream 100 bases:
>100_bases GATTCCGTAATAAAGTTGCGCGATAAGCGAAGAAATGATTTATATTCATAACATAGCAAGTTTATTTACTTTAACGATAG ACAGCTGTATTTATATGACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MNNEIVGDFVSGHYSVSLLKDVIRNNIHSIEESLVSGLMYYSEDARYTLGSLEILEIKNLKENQYSMTYQYNWYIFNACL DINTEEFLTNTVTFIVHPEKIVFDIISNDRPSPADEL
Sequences:
>Translated_117_residues MNNEIVGDFVSGHYSVSLLKDVIRNNIHSIEESLVSGLMYYSEDARYTLGSLEILEIKNLKENQYSMTYQYNWYIFNACL DINTEEFLTNTVTFIVHPEKIVFDIISNDRPSPADEL >Mature_117_residues MNNEIVGDFVSGHYSVSLLKDVIRNNIHSIEESLVSGLMYYSEDARYTLGSLEILEIKNLKENQYSMTYQYNWYIFNACL DINTEEFLTNTVTFIVHPEKIVFDIISNDRPSPADEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13565; Mature: 13565
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: PS00014 ER_TARGET
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNEIVGDFVSGHYSVSLLKDVIRNNIHSIEESLVSGLMYYSEDARYTLGSLEILEIKNL CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEEECCC KENQYSMTYQYNWYIFNACLDINTEEFLTNTVTFIVHPEKIVFDIISNDRPSPADEL CCCCEEEEEEEEEEEEEEEEECCHHHHHHHEEEEEECCHHHEEEECCCCCCCCCCCC >Mature Secondary Structure MNNEIVGDFVSGHYSVSLLKDVIRNNIHSIEESLVSGLMYYSEDARYTLGSLEILEIKNL CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEEECCC KENQYSMTYQYNWYIFNACLDINTEEFLTNTVTFIVHPEKIVFDIISNDRPSPADEL CCCCEEEEEEEEEEEEEEEEECCHHHHHHHEEEEEECCHHHEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA