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The map label for this gene is ycdQ [C]

Identifier: 108797977

GI number: 108797977

Start: 1108198

End: 1109610

Strand: Direct

Name: ycdQ [C]

Synonym: Mmcs_1004

Alternate gene names: 108797977

Gene position: 1108198-1109610 (Clockwise)

Preceding gene: 108797976

Following gene: 108797978

Centisome position: 19.42

GC content: 72.4

Gene sequence:

>1413_bases
GTGACCGGGCCAAGGCTGCCCGACGGCTTTGCTGTGCAGGTCGACCGCCGGGTCAAGGTGCTCGACGAGGGCGCTGCGCT
GCTCGGCGGTTCGCCCACCCGGCTGCTGCGGCTGGCGCCGGCCGCGCAGACCATGCTCAGCGGTGGCCGCCTCGAGGTGC
ACGACGCCACGAGCGCACAGTTGGCGCGCACCCTGCTCGACGCCACCGTCGCCCACCCACGCCCGGCCAGCGGCCCGTCG
CACCGCGACGTGACGGTCGTTATTCCAGTGCGCGACAACATCTCCGGTCTGCAACGCCTGCTCGCGTCGCTGCGCGGCCT
GCGCGTCATCGTCGTCGACGACGGATCGGCGACGCCGATCGAGTGCACCCACATGTCCGGCGTGCACTGCGACGTCCGGG
TGATCCGCCACGACCGCAGCAGGGGACCCGCGGCCGCCCGCAACACCGGCGCGGCGGCCTGCTCGACCGACTTCGTGGCG
TTCCTCGACTCCGACGTGCTACCGCGTCGCGGATGGCTCGAGGCGTTGCTGGGGCACTTCTGCGACCCCGCGGTCGCGCT
GGTCGCACCCCGCATCGTCGGGCTGCGCACCGCCGACAACCCGGTGGCCCGGTACGAGGCGGTGCGCTCGTCGCTCGACC
TCGGGCACCGGGAGGCGCCCGTGGTGCCCTACGGTCCGGTGTCCTACGTGCCGAGCGCCGCGATCATCTGCCGGCGGCGC
GCGCTCGACGAGGTAGGCGGGTTCGACGAGACGATGCACTCCGGTGAGGACGTCGACCTGTGCTGGCGGCTGGTGGAGGC
GGGAGCCCGACTGCGCTACGAGCCGATCGCCCTGGTCGCCCACGACCACCGGACCGACCTGGGGGAGTGGTTCCTCCGCA
AGGCGTTCTACGGCAAGTCCGCGGCGCCGCTGGCGGTTCGGCATCCGGGCAAGACCGCGCCGCTGGTGATCTCGGGCTGG
ACCCTGGTGGTCTGGGTGCTGATGGCGATGGGCAGCTGTATCGGCTACCTGGCCTCGATGCTCGCCGCGGCCCTGACCGC
CCGGCGGGTGGCCAACTCGTTGAGCTCGGTACGGACCGAACCGCGCCAGGTGGCCGCCATCGCCGCGCAGGGACTGTGGT
CGGCGGCGCTGCAACTGGCGTCGGCGATCTGCCGGCACTACTGGCCGATCGCCCTGCTGGCGGCGCTGGTGTCGCGCCGC
TGCCGGCAGGCGGTGTTGATCGCCGCGGTGGTCGACGGCGTGGTCGACTGGGCCGCGCGGCGCGGTAACACCGACGACGA
CACCAAACAGGTCGGGTTGCTGACCTATGTGCTGTTGCGCCGGCTCGACGACATCGCCTACGGGCTCGGCCTGTGGACCG
GGGTGGTGCGCGAACGGCACCTCGGGGCGCTCAAACCCCAGATCCGGACGTAA

Upstream 100 bases:

>100_bases
CCGCCACCGGCGCCGACGGCGCGCGCCTGTTCGGCGAGATGGTGCGGCACTGCGCCGACCGGATCGCGCGCTGGGCCCCG
GACCGCAACGGAATGCTGCA

Downstream 100 bases:

>100_bases
GACGGCCCTTGACCGAGGCTGTGCACAGCGACGTTCTGATCGTCGGCGCCGGAAGCGCCGGATCCGTTTTGGCCGAACGA
CTTTCCGCCGACCCGCGGTG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 470; Mature: 469

Protein sequence:

>470_residues
MTGPRLPDGFAVQVDRRVKVLDEGAALLGGSPTRLLRLAPAAQTMLSGGRLEVHDATSAQLARTLLDATVAHPRPASGPS
HRDVTVVIPVRDNISGLQRLLASLRGLRVIVVDDGSATPIECTHMSGVHCDVRVIRHDRSRGPAAARNTGAAACSTDFVA
FLDSDVLPRRGWLEALLGHFCDPAVALVAPRIVGLRTADNPVARYEAVRSSLDLGHREAPVVPYGPVSYVPSAAIICRRR
ALDEVGGFDETMHSGEDVDLCWRLVEAGARLRYEPIALVAHDHRTDLGEWFLRKAFYGKSAAPLAVRHPGKTAPLVISGW
TLVVWVLMAMGSCIGYLASMLAAALTARRVANSLSSVRTEPRQVAAIAAQGLWSAALQLASAICRHYWPIALLAALVSRR
CRQAVLIAAVVDGVVDWAARRGNTDDDTKQVGLLTYVLLRRLDDIAYGLGLWTGVVRERHLGALKPQIRT

Sequences:

>Translated_470_residues
MTGPRLPDGFAVQVDRRVKVLDEGAALLGGSPTRLLRLAPAAQTMLSGGRLEVHDATSAQLARTLLDATVAHPRPASGPS
HRDVTVVIPVRDNISGLQRLLASLRGLRVIVVDDGSATPIECTHMSGVHCDVRVIRHDRSRGPAAARNTGAAACSTDFVA
FLDSDVLPRRGWLEALLGHFCDPAVALVAPRIVGLRTADNPVARYEAVRSSLDLGHREAPVVPYGPVSYVPSAAIICRRR
ALDEVGGFDETMHSGEDVDLCWRLVEAGARLRYEPIALVAHDHRTDLGEWFLRKAFYGKSAAPLAVRHPGKTAPLVISGW
TLVVWVLMAMGSCIGYLASMLAAALTARRVANSLSSVRTEPRQVAAIAAQGLWSAALQLASAICRHYWPIALLAALVSRR
CRQAVLIAAVVDGVVDWAARRGNTDDDTKQVGLLTYVLLRRLDDIAYGLGLWTGVVRERHLGALKPQIRT
>Mature_469_residues
TGPRLPDGFAVQVDRRVKVLDEGAALLGGSPTRLLRLAPAAQTMLSGGRLEVHDATSAQLARTLLDATVAHPRPASGPSH
RDVTVVIPVRDNISGLQRLLASLRGLRVIVVDDGSATPIECTHMSGVHCDVRVIRHDRSRGPAAARNTGAAACSTDFVAF
LDSDVLPRRGWLEALLGHFCDPAVALVAPRIVGLRTADNPVARYEAVRSSLDLGHREAPVVPYGPVSYVPSAAIICRRRA
LDEVGGFDETMHSGEDVDLCWRLVEAGARLRYEPIALVAHDHRTDLGEWFLRKAFYGKSAAPLAVRHPGKTAPLVISGWT
LVVWVLMAMGSCIGYLASMLAAALTARRVANSLSSVRTEPRQVAAIAAQGLWSAALQLASAICRHYWPIALLAALVSRRC
RQAVLIAAVVDGVVDWAARRGNTDDDTKQVGLLTYVLLRRLDDIAYGLGLWTGVVRERHLGALKPQIRT

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 50632; Mature: 50501

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGPRLPDGFAVQVDRRVKVLDEGAALLGGSPTRLLRLAPAAQTMLSGGRLEVHDATSAQ
CCCCCCCCCCEEEECCHHHHHHCCCHHHCCCHHHHHEECHHHHHHHCCCCEEECCCHHHH
LARTLLDATVAHPRPASGPSHRDVTVVIPVRDNISGLQRLLASLRGLRVIVVDDGSATPI
HHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCE
ECTHMSGVHCDVRVIRHDRSRGPAAARNTGAAACSTDFVAFLDSDVLPRRGWLEALLGHF
EEEECCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHC
CDPAVALVAPRIVGLRTADNPVARYEAVRSSLDLGHREAPVVPYGPVSYVPSAAIICRRR
CCHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHH
ALDEVGGFDETMHSGEDVDLCWRLVEAGARLRYEPIALVAHDHRTDLGEWFLRKAFYGKS
HHHHHCCCHHHHCCCCCHHHHHHHHHHCCCEEECCEEEEECCCCCCHHHHHHHHHHCCCC
AAPLAVRHPGKTAPLVISGWTLVVWVLMAMGSCIGYLASMLAAALTARRVANSLSSVRTE
CCCEEEECCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PRQVAAIAAQGLWSAALQLASAICRHYWPIALLAALVSRRCRQAVLIAAVVDGVVDWAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGNTDDDTKQVGLLTYVLLRRLDDIAYGLGLWTGVVRERHLGALKPQIRT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TGPRLPDGFAVQVDRRVKVLDEGAALLGGSPTRLLRLAPAAQTMLSGGRLEVHDATSAQ
CCCCCCCCCEEEECCHHHHHHCCCHHHCCCHHHHHEECHHHHHHHCCCCEEECCCHHHH
LARTLLDATVAHPRPASGPSHRDVTVVIPVRDNISGLQRLLASLRGLRVIVVDDGSATPI
HHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCE
ECTHMSGVHCDVRVIRHDRSRGPAAARNTGAAACSTDFVAFLDSDVLPRRGWLEALLGHF
EEEECCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHC
CDPAVALVAPRIVGLRTADNPVARYEAVRSSLDLGHREAPVVPYGPVSYVPSAAIICRRR
CCHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHH
ALDEVGGFDETMHSGEDVDLCWRLVEAGARLRYEPIALVAHDHRTDLGEWFLRKAFYGKS
HHHHHCCCHHHHCCCCCHHHHHHHHHHCCCEEECCEEEEECCCCCCHHHHHHHHHHCCCC
AAPLAVRHPGKTAPLVISGWTLVVWVLMAMGSCIGYLASMLAAALTARRVANSLSSVRTE
CCCEEEECCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PRQVAAIAAQGLWSAALQLASAICRHYWPIALLAALVSRRCRQAVLIAAVVDGVVDWAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGNTDDDTKQVGLLTYVLLRRLDDIAYGLGLWTGVVRERHLGALKPQIRT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7836301 [H]