| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108797884
Identifier: 108797884
GI number: 108797884
Start: 1008706
End: 1009446
Strand: Reverse
Name: 108797884
Synonym: Mmcs_0909
Alternate gene names: NA
Gene position: 1009446-1008706 (Counterclockwise)
Preceding gene: 108797885
Following gene: 108797883
Centisome position: 17.69
GC content: 72.47
Gene sequence:
>741_bases ATGAACACACAACCCACCCCCCAGGCGGCCGCCCAGGCGACCGCGACCCAACCCCTCCCCGCCGGCGACGACGAGCGCGT CGTCGGCTTCGGCGTGATGGGCCTGCCCTTCACCAGCGGCCACTACCTCGCCTACCGCGACTTCCCGGCGTCGTCGTTCT CCCCCGCCTACCTGTCGGTGTGGCACCGCACCCCCGACGGGGTGTGGACGTTCTACGCCACCACCCCCGGCGCGCAGAGC TGTTCGCGCTACTTCAGCTCCGCCACCACCGTCGACCCCGTCGTCTGCGACATCACCGCGACGTGGACGACACCGTGGAC GCTCGACATCTCGATTCCCGGCGTCCTGCGGTGGCGGGTCGACATCACCGCGACCCCCACAACGCGGGCGCTCACCGCCG TCGGCACCCACCTGCCCGCCAGGACGTGGACGAGCCCCACGGCGCTCGGCGTCCTCGGCCGACTGGTCGGCCCGATGCTC GGCGCAGGCAGCATCCGGCTGACGGGCACGGCGTCCAACGGCCAGCACTTCCGGGTCGGACCCAAACGGGTCTGGCTGGT CTGCGACTCCACCGCGACTGTCCACGGCGAGGACCTCGGACCCACCGGACCGCTGCCCCGGCAGGCCCGCCTGGCCGACT TCCGGCTCCCCCAGCGCGGCATCTGCGTCGTCGGGCAGGGCTTGTTCGACCCGTTCGACACCCACCGGCACCGCGACGCG GACCGGCTTTCCCTGACCTGA
Upstream 100 bases:
>100_bases CGGTCGCGCTGAGCGCGACCTGCCACGCCGAAATCGCCACGCGGAAGTTGAGGCGAATGCCCCATGCCCGCCGGGGGTCT CCCGCCGCAGCATCGGTGGC
Downstream 100 bases:
>100_bases AGACCACGCCATGACGACGGCGCACAATCAGGTCGTGACCAGTCGCCCGCAGGCCGCGGGACTCCCGACACGCGCGGAAG TCCTCGCGGCCCTGTCGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MNTQPTPQAAAQATATQPLPAGDDERVVGFGVMGLPFTSGHYLAYRDFPASSFSPAYLSVWHRTPDGVWTFYATTPGAQS CSRYFSSATTVDPVVCDITATWTTPWTLDISIPGVLRWRVDITATPTTRALTAVGTHLPARTWTSPTALGVLGRLVGPML GAGSIRLTGTASNGQHFRVGPKRVWLVCDSTATVHGEDLGPTGPLPRQARLADFRLPQRGICVVGQGLFDPFDTHRHRDA DRLSLT
Sequences:
>Translated_246_residues MNTQPTPQAAAQATATQPLPAGDDERVVGFGVMGLPFTSGHYLAYRDFPASSFSPAYLSVWHRTPDGVWTFYATTPGAQS CSRYFSSATTVDPVVCDITATWTTPWTLDISIPGVLRWRVDITATPTTRALTAVGTHLPARTWTSPTALGVLGRLVGPML GAGSIRLTGTASNGQHFRVGPKRVWLVCDSTATVHGEDLGPTGPLPRQARLADFRLPQRGICVVGQGLFDPFDTHRHRDA DRLSLT >Mature_246_residues MNTQPTPQAAAQATATQPLPAGDDERVVGFGVMGLPFTSGHYLAYRDFPASSFSPAYLSVWHRTPDGVWTFYATTPGAQS CSRYFSSATTVDPVVCDITATWTTPWTLDISIPGVLRWRVDITATPTTRALTAVGTHLPARTWTSPTALGVLGRLVGPML GAGSIRLTGTASNGQHFRVGPKRVWLVCDSTATVHGEDLGPTGPLPRQARLADFRLPQRGICVVGQGLFDPFDTHRHRDA DRLSLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26472; Mature: 26472
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTQPTPQAAAQATATQPLPAGDDERVVGFGVMGLPFTSGHYLAYRDFPASSFSPAYLSV CCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCEEEE WHRTPDGVWTFYATTPGAQSCSRYFSSATTVDPVVCDITATWTTPWTLDISIPGVLRWRV EEECCCCEEEEEEECCCHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEECCCEEEEEE DITATPTTRALTAVGTHLPARTWTSPTALGVLGRLVGPMLGAGSIRLTGTASNGQHFRVG EEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEC PKRVWLVCDSTATVHGEDLGPTGPLPRQARLADFRLPQRGICVVGQGLFDPFDTHRHRDA CCEEEEEECCCEEEECCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCHHHHCCCCC DRLSLT CCCCCC >Mature Secondary Structure MNTQPTPQAAAQATATQPLPAGDDERVVGFGVMGLPFTSGHYLAYRDFPASSFSPAYLSV CCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCEEEE WHRTPDGVWTFYATTPGAQSCSRYFSSATTVDPVVCDITATWTTPWTLDISIPGVLRWRV EEECCCCEEEEEEECCCHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEECCCEEEEEE DITATPTTRALTAVGTHLPARTWTSPTALGVLGRLVGPMLGAGSIRLTGTASNGQHFRVG EEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEC PKRVWLVCDSTATVHGEDLGPTGPLPRQARLADFRLPQRGICVVGQGLFDPFDTHRHRDA CCEEEEEECCCEEEECCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCHHHHCCCCC DRLSLT CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA