| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is yfjQ [H]
Identifier: 108797881
GI number: 108797881
Start: 1005737
End: 1006732
Strand: Reverse
Name: yfjQ [H]
Synonym: Mmcs_0906
Alternate gene names: 108797881
Gene position: 1006732-1005737 (Counterclockwise)
Preceding gene: 108797883
Following gene: 108797879
Centisome position: 17.65
GC content: 65.86
Gene sequence:
>996_bases ATGGGCCGGGTGAGCGACGTCTGGGGCCGGGTGTGGCGGAACGGTGAACCGCAGGACGACTTCGAGTTCTCCCGCATCTC CGACTGCCTCGCCGAACCGGGGACCCTGGTGTGGGCCGACGTGTACGCCTCCGACCACGCCATCCTCAAAGACCTCGCCC ACGAACTGGGCCTCAACGAGTGGGCCGTCGAGGACTCCGTCGCCGAGGCCGAGCGCACCAAGGCCACCGTCTACGCGACG CACACGTTCTTCACCGTCTACAGCGTCGACACCCAGGTGCCGGAGAGCGACACCGAATCAGCGCTCGCGATCCACCGGAT CTCCGCCTTCGTGCTGCCGCAGGGTCTGATCACCGTGCGGTTGTCGTCGGATTTCGACATCGACGCGGTCTCGGCGCGCT TCGACGAACTCGGCGGTCAGGAGTTCGGCGTCGGCGCACTCGTGCACGCCCTGCTCGACACGGTGGTCGACAGCCACTTC ACCGCGGTGCAGTACCTCGACGACGCCATCGAGGAGATCGAGGACGCGTTGTTCTCCGACTCGATGCCGCGAGGAGGGTT GCAGCGCACCACTTTCCAATTGCGCAAGGACCTCGTGCATCTGCGGCGGGTGGTGCTGCCGATGCGGGAGGTCGTCAACT CGATCCAGCACCGCCGCCGGGACGCGAGGATGTCGCCCGAGCTCGACCCGCGGTACGCCGACCTCTACGACCACGTGCTG CGCGCGTCGGAGTGGACCGAATCGCTGCGAGACATGATCACGACCGTCTTCGAGACGAACCTGTCGCTGCAGGACGCGCG CCTCAACATGGTGATGAAGAAGCTGACCGGCTGGGCCGCGATCATCGCGGTCCCGACCGCCATCACCGGTTTCTACGGGC AGAACGTCATGTACCCCGGGATCGAGACGGTCGGGGGGTTCCTCACGAGTTCGGCGATCATCGTGCTGCTCGTCGCGATC CTCTACGTGATGTTCAAACGCCGCGACTGGCTCTGA
Upstream 100 bases:
>100_bases GGATCGTGATGCGCGCCCTTCATCGCATCCTTCTTTCTTCGAGAGACATCCCCAGGTTACGCCTGTAGTGACGCGCATCA CATGACGTAAGACTGACAAG
Downstream 100 bases:
>100_bases GGGCCGCGGACCGTGCGCCGAGTTCTACGTCAGGGTCGTTGGCGCCGGATTTCACGACCCTGGTGTAGAAATCGACAGGT ACACCAGCCCTCAAGCCGGG
Product: Mg2+ transporter protein, CorA-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MGRVSDVWGRVWRNGEPQDDFEFSRISDCLAEPGTLVWADVYASDHAILKDLAHELGLNEWAVEDSVAEAERTKATVYAT HTFFTVYSVDTQVPESDTESALAIHRISAFVLPQGLITVRLSSDFDIDAVSARFDELGGQEFGVGALVHALLDTVVDSHF TAVQYLDDAIEEIEDALFSDSMPRGGLQRTTFQLRKDLVHLRRVVLPMREVVNSIQHRRRDARMSPELDPRYADLYDHVL RASEWTESLRDMITTVFETNLSLQDARLNMVMKKLTGWAAIIAVPTAITGFYGQNVMYPGIETVGGFLTSSAIIVLLVAI LYVMFKRRDWL
Sequences:
>Translated_331_residues MGRVSDVWGRVWRNGEPQDDFEFSRISDCLAEPGTLVWADVYASDHAILKDLAHELGLNEWAVEDSVAEAERTKATVYAT HTFFTVYSVDTQVPESDTESALAIHRISAFVLPQGLITVRLSSDFDIDAVSARFDELGGQEFGVGALVHALLDTVVDSHF TAVQYLDDAIEEIEDALFSDSMPRGGLQRTTFQLRKDLVHLRRVVLPMREVVNSIQHRRRDARMSPELDPRYADLYDHVL RASEWTESLRDMITTVFETNLSLQDARLNMVMKKLTGWAAIIAVPTAITGFYGQNVMYPGIETVGGFLTSSAIIVLLVAI LYVMFKRRDWL >Mature_330_residues GRVSDVWGRVWRNGEPQDDFEFSRISDCLAEPGTLVWADVYASDHAILKDLAHELGLNEWAVEDSVAEAERTKATVYATH TFFTVYSVDTQVPESDTESALAIHRISAFVLPQGLITVRLSSDFDIDAVSARFDELGGQEFGVGALVHALLDTVVDSHFT AVQYLDDAIEEIEDALFSDSMPRGGLQRTTFQLRKDLVHLRRVVLPMREVVNSIQHRRRDARMSPELDPRYADLYDHVLR ASEWTESLRDMITTVFETNLSLQDARLNMVMKKLTGWAAIIAVPTAITGFYGQNVMYPGIETVGGFLTSSAIIVLLVAIL YVMFKRRDWL
Specific function: Unknown
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 37247; Mature: 37115
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRVSDVWGRVWRNGEPQDDFEFSRISDCLAEPGTLVWADVYASDHAILKDLAHELGLNE CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEHHHCCHHHHHHHHHHCCCCH WAVEDSVAEAERTKATVYATHTFFTVYSVDTQVPESDTESALAIHRISAFVLPQGLITVR HHHHHHHHHHHHHCEEEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEE LSSDFDIDAVSARFDELGGQEFGVGALVHALLDTVVDSHFTAVQYLDDAIEEIEDALFSD ECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SMPRGGLQRTTFQLRKDLVHLRRVVLPMREVVNSIQHRRRDARMSPELDPRYADLYDHVL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH RASEWTESLRDMITTVFETNLSLQDARLNMVMKKLTGWAAIIAVPTAITGFYGQNVMYPG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC IETVGGFLTSSAIIVLLVAILYVMFKRRDWL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GRVSDVWGRVWRNGEPQDDFEFSRISDCLAEPGTLVWADVYASDHAILKDLAHELGLNE CCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEHHHCCHHHHHHHHHHCCCCH WAVEDSVAEAERTKATVYATHTFFTVYSVDTQVPESDTESALAIHRISAFVLPQGLITVR HHHHHHHHHHHHHCEEEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEE LSSDFDIDAVSARFDELGGQEFGVGALVHALLDTVVDSHFTAVQYLDDAIEEIEDALFSD ECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SMPRGGLQRTTFQLRKDLVHLRRVVLPMREVVNSIQHRRRDARMSPELDPRYADLYDHVL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH RASEWTESLRDMITTVFETNLSLQDARLNMVMKKLTGWAAIIAVPTAITGFYGQNVMYPG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC IETVGGFLTSSAIIVLLVAILYVMFKRRDWL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969503; 9384377 [H]