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The map label for this gene is ybdA [C]

Identifier: 108797878

GI number: 108797878

Start: 1002708

End: 1003949

Strand: Reverse

Name: ybdA [C]

Synonym: Mmcs_0903

Alternate gene names: 108797878

Gene position: 1003949-1002708 (Counterclockwise)

Preceding gene: 108797879

Following gene: 108797876

Centisome position: 17.6

GC content: 71.82

Gene sequence:

>1242_bases
ATGACCGCGCAGACGACGGCGGCGCCGCAGGCGCGCGGTGCCCTCGGGCTGATGTTCGACCCGGTCTTCGGGGCGTTGTT
CTGGGGCAAGATGTTCTCGGTCGTTGCCGTGTGGACGCACGGCATCATCGCGGCGATCGTCATGTACGAGGCGACGGGTT
CGGCGCTCATGGTCGGCCTGGTCGGCGTCGTGCAGTTCGGACCGCAGTTGATCCTCAGCCCGGTCAGCGGCAAGTGGGCC
GACACCGGCAACCCGGCCCGGCAGATCCTGCTCGGCCGGGTGCTGTGCATGGTGGGTTCCGGGTCGATCGCGGTGTGGTT
GGCGATCACCGAGGCGCAGGCCGCGTTGGCGGTGCTGCTCGGCACGCTGCTGGTCGGGGTCGGGTTCGTGGTGGGCGGCC
CGGCGATGCAGTCGATCGTGCCGAACCTCATACGCACCGGCGAGCTGTCGACGGCCATGGCGCTCAACAGCATTCCGATG
ACGGTCGGCCGGATGATCGGCCCGGTCATCGGCGCCTACCTGGCCGCACACCTCGGCTACGCCGAAGGCTTCGCGGCCAG
CGCGGGCCTGCACCTGATCTTCGCGATCTTCCTGCTGGTGGTCCGCTTCCCCGCTCCCCCGGTGCGGCGCGAAGGGGCGG
ACTACCGCGTGCGCGCGGCGCTGAAGTACGTGTGGCGCGACAAGCCGTTGTTCCTGGCCCTGCTGGCCGTCACGACGGTC
GGGTTCGCCGCGGACTCGTCGATCACGCTGACGCCGTCGATGGCCGACGCGCTGGGCGGGGACACCCGACTCGTCGGTGC
GCTGTCGGCGGTGTTCGGCGTCGGCGCGGCGCTCGGCATGGCGGTGCTGGCGCTGTTGCGCGGACGGATCGCGGCCGGCT
GGGTGTCGTCGGTCGGGTTGTGGCTGTTGTGCGCCGGATGCGCTGTCCTGGCGTTCGGGACCGTGACGCCGGTGGCGGTG
GCCGGGTTCTGGCTCGCCGGTCTCGGCTTCGGCTGGGCGATGACGGGCCTGAGCACGGTGGTGCAGGAGCGGGCGCCCGA
GGAGCTGCGGGGCCGGATCATGGCGCTGTGGCTGGTCGGGTTCCTGGGCTCGCGACCCATCGCGGCGGCCGTACTCGGCG
GCGCGGCCGACGCGGTGAACGTGTTCGTGGCGTTCGGCATCGCGGCGGCGTCGGTGGTGGGCGTCGCGGTGATGTGCCGG
CCGTCGACGCTGATCGGCGGCCTGCCCGCTTCGCGAGACTGA

Upstream 100 bases:

>100_bases
TCGTCGCCGACGTGGTGTCCGACTGGCCCGACACCGACGTCGACGCACTCGTCGGCCTGCTCGACCGGCTTGTGCTCGAC
TTCGAGCGCGGGGTGCGCGC

Downstream 100 bases:

>100_bases
AACCACGCAGCAGAAGTGCGAGAGGGGGCCTGCAGGAGTTCAGCCTCGACTCACCGCGGGCCCTACACCGTCGCCGCGAC
CGGCGGCCCGATCTCCTGCT

Product: major facilitator transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Transporter; Facilitator Superfamily ; Macrolide-Efflux Protein; MFS Family Transporter; Permeases Of Facilitator Superfamily

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MTAQTTAAPQARGALGLMFDPVFGALFWGKMFSVVAVWTHGIIAAIVMYEATGSALMVGLVGVVQFGPQLILSPVSGKWA
DTGNPARQILLGRVLCMVGSGSIAVWLAITEAQAALAVLLGTLLVGVGFVVGGPAMQSIVPNLIRTGELSTAMALNSIPM
TVGRMIGPVIGAYLAAHLGYAEGFAASAGLHLIFAIFLLVVRFPAPPVRREGADYRVRAALKYVWRDKPLFLALLAVTTV
GFAADSSITLTPSMADALGGDTRLVGALSAVFGVGAALGMAVLALLRGRIAAGWVSSVGLWLLCAGCAVLAFGTVTPVAV
AGFWLAGLGFGWAMTGLSTVVQERAPEELRGRIMALWLVGFLGSRPIAAAVLGGAADAVNVFVAFGIAAASVVGVAVMCR
PSTLIGGLPASRD

Sequences:

>Translated_413_residues
MTAQTTAAPQARGALGLMFDPVFGALFWGKMFSVVAVWTHGIIAAIVMYEATGSALMVGLVGVVQFGPQLILSPVSGKWA
DTGNPARQILLGRVLCMVGSGSIAVWLAITEAQAALAVLLGTLLVGVGFVVGGPAMQSIVPNLIRTGELSTAMALNSIPM
TVGRMIGPVIGAYLAAHLGYAEGFAASAGLHLIFAIFLLVVRFPAPPVRREGADYRVRAALKYVWRDKPLFLALLAVTTV
GFAADSSITLTPSMADALGGDTRLVGALSAVFGVGAALGMAVLALLRGRIAAGWVSSVGLWLLCAGCAVLAFGTVTPVAV
AGFWLAGLGFGWAMTGLSTVVQERAPEELRGRIMALWLVGFLGSRPIAAAVLGGAADAVNVFVAFGIAAASVVGVAVMCR
PSTLIGGLPASRD
>Mature_412_residues
TAQTTAAPQARGALGLMFDPVFGALFWGKMFSVVAVWTHGIIAAIVMYEATGSALMVGLVGVVQFGPQLILSPVSGKWAD
TGNPARQILLGRVLCMVGSGSIAVWLAITEAQAALAVLLGTLLVGVGFVVGGPAMQSIVPNLIRTGELSTAMALNSIPMT
VGRMIGPVIGAYLAAHLGYAEGFAASAGLHLIFAIFLLVVRFPAPPVRREGADYRVRAALKYVWRDKPLFLALLAVTTVG
FAADSSITLTPSMADALGGDTRLVGALSAVFGVGAALGMAVLALLRGRIAAGWVSSVGLWLLCAGCAVLAFGTVTPVAVA
GFWLAGLGFGWAMTGLSTVVQERAPEELRGRIMALWLVGFLGSRPIAAAVLGGAADAVNVFVAFGIAAASVVGVAVMCRP
STLIGGLPASRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42202; Mature: 42070

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAQTTAAPQARGALGLMFDPVFGALFWGKMFSVVAVWTHGIIAAIVMYEATGSALMVGL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VGVVQFGPQLILSPVSGKWADTGNPARQILLGRVLCMVGSGSIAVWLAITEAQAALAVLL
HHHHHHCCHHEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHH
GTLLVGVGFVVGGPAMQSIVPNLIRTGELSTAMALNSIPMTVGRMIGPVIGAYLAAHLGY
HHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCH
AEGFAASAGLHLIFAIFLLVVRFPAPPVRREGADYRVRAALKYVWRDKPLFLALLAVTTV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
GFAADSSITLTPSMADALGGDTRLVGALSAVFGVGAALGMAVLALLRGRIAAGWVSSVGL
HHCCCCCEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLLCAGCAVLAFGTVTPVAVAGFWLAGLGFGWAMTGLSTVVQERAPEELRGRIMALWLVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
FLGSRPIAAAVLGGAADAVNVFVAFGIAAASVVGVAVMCRPSTLIGGLPASRD
HHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC
>Mature Secondary Structure 
TAQTTAAPQARGALGLMFDPVFGALFWGKMFSVVAVWTHGIIAAIVMYEATGSALMVGL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VGVVQFGPQLILSPVSGKWADTGNPARQILLGRVLCMVGSGSIAVWLAITEAQAALAVLL
HHHHHHCCHHEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHH
GTLLVGVGFVVGGPAMQSIVPNLIRTGELSTAMALNSIPMTVGRMIGPVIGAYLAAHLGY
HHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCH
AEGFAASAGLHLIFAIFLLVVRFPAPPVRREGADYRVRAALKYVWRDKPLFLALLAVTTV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
GFAADSSITLTPSMADALGGDTRLVGALSAVFGVGAALGMAVLALLRGRIAAGWVSSVGL
HHCCCCCEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLLCAGCAVLAFGTVTPVAVAGFWLAGLGFGWAMTGLSTVVQERAPEELRGRIMALWLVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
FLGSRPIAAAVLGGAADAVNVFVAFGIAAASVVGVAVMCRPSTLIGGLPASRD
HHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA