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The map label for this gene is soxA [H]

Identifier: 108797866

GI number: 108797866

Start: 983840

End: 985282

Strand: Reverse

Name: soxA [H]

Synonym: Mmcs_0891

Alternate gene names: 108797866

Gene position: 985282-983840 (Counterclockwise)

Preceding gene: 108797867

Following gene: 108797865

Centisome position: 17.27

GC content: 69.65

Gene sequence:

>1443_bases
GTGATCCGCTTCAACGCCTTCGACATGAACTGCGTCGCCCACCAGTCCCCCGGGCTGTGGAAGCACCCCGAGGACCAGTC
CTGGCGATACAAGGACCTGCAGTACTGGACCGAACTGGCCAAGCTGCTGGAACGCGGACGCTTCGACGGCCTGTTCATCG
CCGACGTGCTGGGCACCTACGACGTGTACGGCGCGAGCGACGAGGCCGCGATCCGCCAGGCCGCCCAGGTCCCGGTCAAC
GATCCGCTGCTGCTGGTGTCCGCGATGGCCTACGTCACCAACGACCTCGGCTTCGGCGTCACCACCGGCACCGGCTTCGA
GCACCCCTATCCGTTCGCCCGGCGGCTGTCGACGCTGGACCACCTGACAGGAGGCCGCATCGGCTGGAACGTCGTCACCG
GCTACCTGCCCGCCGCCGCGCGCAACATGGGCCAGACCGACCAACCCGCCCACGACGCCCGCTACGACCACGCCGACGAA
TACCTCGAGGTCCTCTACAAGCTGTGGGAGGGCTCGTGGGAGGACGATGCGGTCATCCGCGACCGCGAGCGCGGCATCTT
CACCGACCCCACCAAGGTGCACCACATCGGCCACGACGGAACGCATTTCAAGGTGCCGGGCATCCACCTGTCCGAACCGT
CGCCACAGCGAACACCGGTGATCTACCAGGCCGGCTCCAGCCCACGCGGGGTGCGCTTCGCCGCGGAGAACGCCGAGGCC
ATCTTCACCGCGGCCCCCACCAAGGCGCTGCTGCGCGAGACGGTGACGACCATCCGCCGCGAGCTCGAGATCGCCGGCCG
CGACCCGTACGCGGTGAAGATCTTCAACCTCTCGACCGTGATCACCGCCGACACCGACGACGAGGCGCACGCCAAACACG
CCGAGTACCTGTCCTACGGCGACGCCGAGGGTGCGCTGACGTTCATGTCCGGCTGGATGGGCGTCGACCTGGCGCGCTTC
GGGCTCGACGAACCGGTCGGCAACGTCGACTCCAACGCGATCCTGTCGGCGGTCGCGGCGTTCCAGTCCGCCGACCCCGA
CGGCCGCGAGTGGGCGGTCCGCGACATCGCCGAGTGGGGCAAGATCGGCGGGATGGGCCCGCGCATCGTGGGTTCCGGTG
TGTCCGTGGCCGATACGCTGCAGGAGTGGGTCGAGGAGACCGACGTCGACGGGTTCAACCTCGCCTACGCCGTCACGCCG
GGTTCGTTCGCCGACTTCGTCGACCACGTCGTGCCGGTGCTGACCGCGCGCGGGGCCTACCAGTCGTCGTACGCCCCGGG
CACGCTGCGCAACAAACTGCTCGGCCGCGGCGACCGGCTGCCCGACGAGCATCGCGGCGCCCGCTACCGTGTGGGGGGAC
CGGCCTCCACCATCATCGACCGGCCCTCGACAGTGCCGTCGTCAGCGGCGTCGGTGGCCTCGCAGCCGACGCGCGGCCGT
TAG

Upstream 100 bases:

>100_bases
CATTTGTGTCTGCTCGCGGTGGGAACGCCCCCAAAGAATCGCGCAGATTTGAACCCGTGACCGCCCGGCTCCGAGCGGCA
ACTATTTCGCGGTGACTCGT

Downstream 100 bases:

>100_bases
GAGTTACTCGTGACTATCCAATTGCATTGGTTCCTGCCCACTTACGGCGACAGCCGGTTGATCGTCGGCGGGGGCCACGG
CATGCCCGCCGGCGCCGCGC

Product: putative monooxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MIRFNAFDMNCVAHQSPGLWKHPEDQSWRYKDLQYWTELAKLLERGRFDGLFIADVLGTYDVYGASDEAAIRQAAQVPVN
DPLLLVSAMAYVTNDLGFGVTTGTGFEHPYPFARRLSTLDHLTGGRIGWNVVTGYLPAAARNMGQTDQPAHDARYDHADE
YLEVLYKLWEGSWEDDAVIRDRERGIFTDPTKVHHIGHDGTHFKVPGIHLSEPSPQRTPVIYQAGSSPRGVRFAAENAEA
IFTAAPTKALLRETVTTIRRELEIAGRDPYAVKIFNLSTVITADTDDEAHAKHAEYLSYGDAEGALTFMSGWMGVDLARF
GLDEPVGNVDSNAILSAVAAFQSADPDGREWAVRDIAEWGKIGGMGPRIVGSGVSVADTLQEWVEETDVDGFNLAYAVTP
GSFADFVDHVVPVLTARGAYQSSYAPGTLRNKLLGRGDRLPDEHRGARYRVGGPASTIIDRPSTVPSSAASVASQPTRGR

Sequences:

>Translated_480_residues
MIRFNAFDMNCVAHQSPGLWKHPEDQSWRYKDLQYWTELAKLLERGRFDGLFIADVLGTYDVYGASDEAAIRQAAQVPVN
DPLLLVSAMAYVTNDLGFGVTTGTGFEHPYPFARRLSTLDHLTGGRIGWNVVTGYLPAAARNMGQTDQPAHDARYDHADE
YLEVLYKLWEGSWEDDAVIRDRERGIFTDPTKVHHIGHDGTHFKVPGIHLSEPSPQRTPVIYQAGSSPRGVRFAAENAEA
IFTAAPTKALLRETVTTIRRELEIAGRDPYAVKIFNLSTVITADTDDEAHAKHAEYLSYGDAEGALTFMSGWMGVDLARF
GLDEPVGNVDSNAILSAVAAFQSADPDGREWAVRDIAEWGKIGGMGPRIVGSGVSVADTLQEWVEETDVDGFNLAYAVTP
GSFADFVDHVVPVLTARGAYQSSYAPGTLRNKLLGRGDRLPDEHRGARYRVGGPASTIIDRPSTVPSSAASVASQPTRGR
>Mature_480_residues
MIRFNAFDMNCVAHQSPGLWKHPEDQSWRYKDLQYWTELAKLLERGRFDGLFIADVLGTYDVYGASDEAAIRQAAQVPVN
DPLLLVSAMAYVTNDLGFGVTTGTGFEHPYPFARRLSTLDHLTGGRIGWNVVTGYLPAAARNMGQTDQPAHDARYDHADE
YLEVLYKLWEGSWEDDAVIRDRERGIFTDPTKVHHIGHDGTHFKVPGIHLSEPSPQRTPVIYQAGSSPRGVRFAAENAEA
IFTAAPTKALLRETVTTIRRELEIAGRDPYAVKIFNLSTVITADTDDEAHAKHAEYLSYGDAEGALTFMSGWMGVDLARF
GLDEPVGNVDSNAILSAVAAFQSADPDGREWAVRDIAEWGKIGGMGPRIVGSGVSVADTLQEWVEETDVDGFNLAYAVTP
GSFADFVDHVVPVLTARGAYQSSYAPGTLRNKLLGRGDRLPDEHRGARYRVGGPASTIIDRPSTVPSSAASVASQPTRGR

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. This enzyme metabolizes DBT-sulfone (DBTO2 or DBT 5,5-dioxide) to 2- hydroxybiphenyl (2-HBP) [H]

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family [H]

Homologues:

Organism=Escherichia coli, GI1787247, Length=343, Percent_Identity=27.4052478134111, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1787166, Length=320, Percent_Identity=26.25, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR016215 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 52507; Mature: 52507

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRFNAFDMNCVAHQSPGLWKHPEDQSWRYKDLQYWTELAKLLERGRFDGLFIADVLGTY
CEEEEEECCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCH
DVYGASDEAAIRQAAQVPVNDPLLLVSAMAYVTNDLGFGVTTGTGFEHPYPFARRLSTLD
HCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHH
HLTGGRIGWNVVTGYLPAAARNMGQTDQPAHDARYDHADEYLEVLYKLWEGSWEDDAVIR
HHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHCCCCCCCCHHH
DRERGIFTDPTKVHHIGHDGTHFKVPGIHLSEPSPQRTPVIYQAGSSPRGVRFAAENAEA
HCCCCCCCCCHHEEECCCCCCEEECCCEECCCCCCCCCCEEEECCCCCCCEEEECCCCCE
IFTAAPTKALLRETVTTIRRELEIAGRDPYAVKIFNLSTVITADTDDEAHAKHAEYLSYG
EEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHCC
DAEGALTFMSGWMGVDLARFGLDEPVGNVDSNAILSAVAAFQSADPDGREWAVRDIAEWG
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
KIGGMGPRIVGSGVSVADTLQEWVEETDVDGFNLAYAVTPGSFADFVDHVVPVLTARGAY
HCCCCCCCEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCC
QSSYAPGTLRNKLLGRGDRLPDEHRGARYRVGGPASTIIDRPSTVPSSAASVASQPTRGR
CCCCCCHHHHHHHHCCCCCCCHHHCCCEEECCCCHHHHCCCCCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MIRFNAFDMNCVAHQSPGLWKHPEDQSWRYKDLQYWTELAKLLERGRFDGLFIADVLGTY
CEEEEEECCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCH
DVYGASDEAAIRQAAQVPVNDPLLLVSAMAYVTNDLGFGVTTGTGFEHPYPFARRLSTLD
HCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHH
HLTGGRIGWNVVTGYLPAAARNMGQTDQPAHDARYDHADEYLEVLYKLWEGSWEDDAVIR
HHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHCCCCCCCCHHH
DRERGIFTDPTKVHHIGHDGTHFKVPGIHLSEPSPQRTPVIYQAGSSPRGVRFAAENAEA
HCCCCCCCCCHHEEECCCCCCEEECCCEECCCCCCCCCCEEEECCCCCCCEEEECCCCCE
IFTAAPTKALLRETVTTIRRELEIAGRDPYAVKIFNLSTVITADTDDEAHAKHAEYLSYG
EEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHCC
DAEGALTFMSGWMGVDLARFGLDEPVGNVDSNAILSAVAAFQSADPDGREWAVRDIAEWG
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
KIGGMGPRIVGSGVSVADTLQEWVEETDVDGFNLAYAVTPGSFADFVDHVVPVLTARGAY
HCCCCCCCEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCC
QSSYAPGTLRNKLLGRGDRLPDEHRGARYRVGGPASTIIDRPSTVPSSAASVASQPTRGR
CCCCCCHHHHHHHHCCCCCCCHHHCCCEEECCCCHHHHCCCCCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]