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The map label for this gene is lrp [C]

Identifier: 108797846

GI number: 108797846

Start: 966333

End: 966851

Strand: Direct

Name: lrp [C]

Synonym: Mmcs_0871

Alternate gene names: 108797846

Gene position: 966333-966851 (Clockwise)

Preceding gene: 108797834

Following gene: 108797848

Centisome position: 16.94

GC content: 66.28

Gene sequence:

>519_bases
ATGACGGATGCGATCGACTCCAAGACGGTCAGGCGCGCACCGGGGCGGCCGGCGACCGTGCCCGACCGCAGGCCGGTGCT
CGACGACCTCGACCGGCAGATCATCCGGATCCTGCAGAACAACGCGCGGATCCCCAACACCGAGATCGCCCGGGCGCTCA
AGGTCACCGAGACCACGATCCGCAACCGGGTCAACCGCCTGCTCGAAGAGGAACTCATCGAGATGGTCGCGCTGATCACG
CCAAAGGCCAAGGAGGCCAGCGTCTCCGCGTTCATCCTGGTGCGGGTGTCACCCGAAGCGGTCGACCCGGCGATCGAACT
GCTCAAGACGCGCTCGGAAGTGCGTTACCTCAGCCGGGTGCTCTCCCGCGCCCAGATCCTCATCGAGACGTTCTTCACCG
ACAACGACCACCTGCTCGCGTTCCAGGACGAGTGCCTGGCCGCCCTGCCGGGGGTGCAGTCGATCGACACCTCGCTGGTG
CTGCGCGTGGACAAGGCGTCGTTCGAGTGGGAGATCTGA

Upstream 100 bases:

>100_bases
AGAGTAGGCTGGCTCACATTTCGTAGCCGTGAACAAGTTGTAAAGCGAAGCAATTCGCGGGTTACGCTTTGAATATCGAA
ACTTGTGGGAGGGCCGGGGA

Downstream 100 bases:

>100_bases
GGCGTCAGCACACGCCGACGTAACCGTCCCTGCGGAAGTCCGACCCGCCGTCGAGGCCCGCGGGTGTCCGCAGGATCAAC
TGCGCACCACCGCATTCGGA

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MTDAIDSKTVRRAPGRPATVPDRRPVLDDLDRQIIRILQNNARIPNTEIARALKVTETTIRNRVNRLLEEELIEMVALIT
PKAKEASVSAFILVRVSPEAVDPAIELLKTRSEVRYLSRVLSRAQILIETFFTDNDHLLAFQDECLAALPGVQSIDTSLV
LRVDKASFEWEI

Sequences:

>Translated_172_residues
MTDAIDSKTVRRAPGRPATVPDRRPVLDDLDRQIIRILQNNARIPNTEIARALKVTETTIRNRVNRLLEEELIEMVALIT
PKAKEASVSAFILVRVSPEAVDPAIELLKTRSEVRYLSRVLSRAQILIETFFTDNDHLLAFQDECLAALPGVQSIDTSLV
LRVDKASFEWEI
>Mature_171_residues
TDAIDSKTVRRAPGRPATVPDRRPVLDDLDRQIIRILQNNARIPNTEIARALKVTETTIRNRVNRLLEEELIEMVALITP
KAKEASVSAFILVRVSPEAVDPAIELLKTRSEVRYLSRVLSRAQILIETFFTDNDHLLAFQDECLAALPGVQSIDTSLVL
RVDKASFEWEI

Specific function: Mediates A Global Response To Leucine. Exogenous Leucine Affects The Expression Of A Number Of Different Operons; Lrp Mediates This Effect For At Least Some Of These Operons. For Example It Is Regulator Of The Branched-Chain Amino Acid Transport Genes. [

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR013249
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF08281 Sigma70_r4_2 [H]

EC number: NA

Molecular weight: Translated: 19429; Mature: 19297

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAIDSKTVRRAPGRPATVPDRRPVLDDLDRQIIRILQNNARIPNTEIARALKVTETTI
CCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
RNRVNRLLEEELIEMVALITPKAKEASVSAFILVRVSPEAVDPAIELLKTRSEVRYLSRV
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
LSRAQILIETFFTDNDHLLAFQDECLAALPGVQSIDTSLVLRVDKASFEWEI
HHHHHHHHHHHHCCCCCEEEEHHHHHHHCCCCCCCCCEEEEEEECCCCCCCC
>Mature Secondary Structure 
TDAIDSKTVRRAPGRPATVPDRRPVLDDLDRQIIRILQNNARIPNTEIARALKVTETTI
CCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
RNRVNRLLEEELIEMVALITPKAKEASVSAFILVRVSPEAVDPAIELLKTRSEVRYLSRV
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
LSRAQILIETFFTDNDHLLAFQDECLAALPGVQSIDTSLVLRVDKASFEWEI
HHHHHHHHHHHHCCCCCEEEEHHHHHHHCCCCCCCCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]