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The map label for this gene is 108797836

Identifier: 108797836

GI number: 108797836

Start: 951444

End: 953792

Strand: Reverse

Name: 108797836

Synonym: Mmcs_0861

Alternate gene names: NA

Gene position: 953792-951444 (Counterclockwise)

Preceding gene: 108797837

Following gene: 108797835

Centisome position: 16.72

GC content: 69.18

Gene sequence:

>2349_bases
GTGAGCGGGGATCTGGTCCTCACCGACGAGTTCCGGGAGGCGTTGGCGCTTCTGGCCGGCGGCCGCCACCTGTTCCTCAC
CGGTAAGGCGGGCACCGGTAAGTCCACGCTGATCCGGCGTTTCATGGCCGAGACAGACCGCAGTGTGGTGGTGGTCGCCC
CCACCGGGATCGCGGCGTTGAACGTCGACGGCTACACCATCCACCGACTGTTCGGGTTCCGCACCACGACCACGCTGGCC
GACGTCACCGGCGGCGACTACCGGCCGGGCCGGTTCGCCAAGACGCTGGCGTCGCTGCAGACGCTGATCATCGACGAGGC
GTCCATGGTCCGCGCCGACGTCTTCGACATGGTCGCCACGGCGCTGGAGAAGTTCGGCCCGGAGCCGGGCGTGCCGTTCG
GCGGGGTCCAGGTCGTGCTGGTCGGCGACCTCTACCAGTTGCCGCCGGTCGTCGGCGACGGCGAGGAGGGCTACTTCTCG
TCGGTCTACGAGACGCCGTACTTCTTCTCGGCCCGCAAGTTCGAGCGCGCCCACTTCCCCACCATCTCGTTGACGACGGT
GTTCCGCCAGCTCGGCGACGACCGAATGACGGCGATCCTCAACGAGATTCGCGAAGGTGTGCTGCTGGGTCACGCGCAGG
AGCAGCTCAACGCGCGCGCCGACAAGGATTTCGTCCCGCCCGACGACGAGTTCTGGCTGACGTTGGCGCCGACCAATCGG
CTGGTGACCGCGCGCAACCGTCAGCACCTCGAACGGCTGCCCGGCGACGAGTTGATGCACCGTGCCCGCGAGTCCGGTGA
CCTGTCGCTGTTCGACAAGCCGATCGAGGACGAACTGCGGTTCAAGATCGGCGCGCAGGTGATGATGCTCAACAACGATC
AGGGTGACCGGTGGGTCAACGGGTCGATCGGGCGTGTCGTCGGCGTGGGCTACGACCGCTACGGCGTGGTCGTGGAGGTC
GAGTTCGCCGACGGGTCGTGCGCGGAGGTCACACCGTTCACGTGGGAGGCGACGCGACCGGTGGTCGACGGCGGCACGCT
GCGGCGTGAGGTCATCGGGACGTTCACGCAACTGCCGTTCAAGCTGGCGTGGGCGATCACCATCCACAAGAGCCAGGGGC
AGACGCTGGAACGGGTGGTCGTCGACCTCACCGGTGGCATGTTCTCGACGGGTCAGCTGTACGTCGCGTTGAGCCGCTGC
ACGTCATTGGCCGGGCTGGTGCTCAAACGCCCTGTGCTGCCGAAGGATCTGAAGACCGACCGCCGGATCGCGCGATTCCT
GCGCACCTCGGTCAGCGGCGCGGGGGCGCGCAGGTACTGCGCGATCGGGATGCTCACCGTCGGCGACGAGGGCCGGATGT
CCCGGCCGCGACCGGTGGAGCTGGCGGTCGCGTTCGACGACGGCACCGCCGTCTCGACCCTGGTGAACCCGCAGCGCGAC
CTCGCCGATGCGCGAAAGGCATACGGCATCAGCGTGTCCGACGTGTTGTTGGCGCCCACGCTACGTGAGGTGTGGGCGGT
GATCGCACCGATGCTGGCGGGCTGCACGCCGGTGGGGCCCGGCGTGGACGAGACGCTGGGATTGATCGATTTCGAGCTCA
AACGGCTCGGCCATGTGGCGGTGATGCCGTTGGGCGTCGAACTGCGTGGAGCGCAGGCCTCGGGGCGCACAGCGCTGGAG
CGGGCACGGTCGGCGCTCGCGGCCCTGGCGTCGACGACGGTCGAGGAGGGCTCGTCGGCGTTCGAGGAACCCGAACTCGC
CGAATCGGTTTCGGGGCTGCTGGTCAGCCGGGACCCTTCGGTGCCGACGCCGAAGGCCGAACATCTGCCTGGGCTGTCGG
CGCTGTTGCGGATCAGCCGCGACGTGGGGGCGGTGCTGCTGGGTGCGTCGGCGCACCGAGACCTCGACTCGTCGTGGGAT
GCGGCGGCGCGGCTGGCCGTGGCCGATCAGTTGCGTGCGGCGGCGAGCCGCGCGCTGCTGCCCGACGAGGTGGTGGCGCG
GCTACACGAGGCGTCGTCGCTGCTCGGTGTCGACGTGGTGAGCGACGCGGAACTGGTGGTGCGCCACGACATCGGTGAGG
CGTTGGCACCGGGCGCGCGGATCTGTTTCACCGGGACGGCGCTGGACCCGTCGGGGCGGGTGGTGGAGCGCGAGGAGATC
GAGCGGATGGCCGAGGCGGCGGGGTTGAAACCGGTGCGGTCGGTGACCAAGACGCGGTGCGAGGTGCTGGTGACGGCCGA
GGCGGGCACGCAGTCGGGGAAAGCGCGCAAAGCGCAGGAGTACGGCAAGCCGGTGTTCACCGCCGAGGAGTTCTTCGCCT
GGCTGAGCGGTGTCACACCCCCGACGTAG

Upstream 100 bases:

>100_bases
AACGCTCTCGCGGATGCGGAGCGGCTCGAGCGGTACGGCACGGTTGCGCAGCGTCTGTCGAGCCGTTAGCGCGGGGTTGT
CGGCGGGTACTGTGCGACCC

Downstream 100 bases:

>100_bases
CGTCGGTTCATGAAGAACGTCAGCACGCAACGCGGCCGGACGGTGGTGTCGGCCGAACACGCCCGGGAATGCGAGTTGTG
CGGGGCAGCCGGTGACTTCT

Product: ATPas

Products: NA

Alternate protein names: Helicase; TPR Domain Protein; TPR Domain-Containing Protein; ATPase; Exonuclease V Subunit Alpha; 5-3' DNA Helicase; Helicase-Related Protein; Aaa ATPase; Glycosysltransferase; Hrdc Domain Protein; Helicase-Family Protein; Helicase Protein; HRDC Domain Protein; RecD-Like Exodeoxyribonuclease V Alpha Chain; RRM3/PIF1 Helicase-Like Protein; ATP-Dependent ExoDNAse Alpha Subunit; DNA Helicase AAA ATPase; DNA Helicase; DNA Helicase/AAA ATPase; Helicase RecD/TraA Family

Number of amino acids: Translated: 782; Mature: 781

Protein sequence:

>782_residues
MSGDLVLTDEFREALALLAGGRHLFLTGKAGTGKSTLIRRFMAETDRSVVVVAPTGIAALNVDGYTIHRLFGFRTTTTLA
DVTGGDYRPGRFAKTLASLQTLIIDEASMVRADVFDMVATALEKFGPEPGVPFGGVQVVLVGDLYQLPPVVGDGEEGYFS
SVYETPYFFSARKFERAHFPTISLTTVFRQLGDDRMTAILNEIREGVLLGHAQEQLNARADKDFVPPDDEFWLTLAPTNR
LVTARNRQHLERLPGDELMHRARESGDLSLFDKPIEDELRFKIGAQVMMLNNDQGDRWVNGSIGRVVGVGYDRYGVVVEV
EFADGSCAEVTPFTWEATRPVVDGGTLRREVIGTFTQLPFKLAWAITIHKSQGQTLERVVVDLTGGMFSTGQLYVALSRC
TSLAGLVLKRPVLPKDLKTDRRIARFLRTSVSGAGARRYCAIGMLTVGDEGRMSRPRPVELAVAFDDGTAVSTLVNPQRD
LADARKAYGISVSDVLLAPTLREVWAVIAPMLAGCTPVGPGVDETLGLIDFELKRLGHVAVMPLGVELRGAQASGRTALE
RARSALAALASTTVEEGSSAFEEPELAESVSGLLVSRDPSVPTPKAEHLPGLSALLRISRDVGAVLLGASAHRDLDSSWD
AAARLAVADQLRAAASRALLPDEVVARLHEASSLLGVDVVSDAELVVRHDIGEALAPGARICFTGTALDPSGRVVEREEI
ERMAEAAGLKPVRSVTKTRCEVLVTAEAGTQSGKARKAQEYGKPVFTAEEFFAWLSGVTPPT

Sequences:

>Translated_782_residues
MSGDLVLTDEFREALALLAGGRHLFLTGKAGTGKSTLIRRFMAETDRSVVVVAPTGIAALNVDGYTIHRLFGFRTTTTLA
DVTGGDYRPGRFAKTLASLQTLIIDEASMVRADVFDMVATALEKFGPEPGVPFGGVQVVLVGDLYQLPPVVGDGEEGYFS
SVYETPYFFSARKFERAHFPTISLTTVFRQLGDDRMTAILNEIREGVLLGHAQEQLNARADKDFVPPDDEFWLTLAPTNR
LVTARNRQHLERLPGDELMHRARESGDLSLFDKPIEDELRFKIGAQVMMLNNDQGDRWVNGSIGRVVGVGYDRYGVVVEV
EFADGSCAEVTPFTWEATRPVVDGGTLRREVIGTFTQLPFKLAWAITIHKSQGQTLERVVVDLTGGMFSTGQLYVALSRC
TSLAGLVLKRPVLPKDLKTDRRIARFLRTSVSGAGARRYCAIGMLTVGDEGRMSRPRPVELAVAFDDGTAVSTLVNPQRD
LADARKAYGISVSDVLLAPTLREVWAVIAPMLAGCTPVGPGVDETLGLIDFELKRLGHVAVMPLGVELRGAQASGRTALE
RARSALAALASTTVEEGSSAFEEPELAESVSGLLVSRDPSVPTPKAEHLPGLSALLRISRDVGAVLLGASAHRDLDSSWD
AAARLAVADQLRAAASRALLPDEVVARLHEASSLLGVDVVSDAELVVRHDIGEALAPGARICFTGTALDPSGRVVEREEI
ERMAEAAGLKPVRSVTKTRCEVLVTAEAGTQSGKARKAQEYGKPVFTAEEFFAWLSGVTPPT
>Mature_781_residues
SGDLVLTDEFREALALLAGGRHLFLTGKAGTGKSTLIRRFMAETDRSVVVVAPTGIAALNVDGYTIHRLFGFRTTTTLAD
VTGGDYRPGRFAKTLASLQTLIIDEASMVRADVFDMVATALEKFGPEPGVPFGGVQVVLVGDLYQLPPVVGDGEEGYFSS
VYETPYFFSARKFERAHFPTISLTTVFRQLGDDRMTAILNEIREGVLLGHAQEQLNARADKDFVPPDDEFWLTLAPTNRL
VTARNRQHLERLPGDELMHRARESGDLSLFDKPIEDELRFKIGAQVMMLNNDQGDRWVNGSIGRVVGVGYDRYGVVVEVE
FADGSCAEVTPFTWEATRPVVDGGTLRREVIGTFTQLPFKLAWAITIHKSQGQTLERVVVDLTGGMFSTGQLYVALSRCT
SLAGLVLKRPVLPKDLKTDRRIARFLRTSVSGAGARRYCAIGMLTVGDEGRMSRPRPVELAVAFDDGTAVSTLVNPQRDL
ADARKAYGISVSDVLLAPTLREVWAVIAPMLAGCTPVGPGVDETLGLIDFELKRLGHVAVMPLGVELRGAQASGRTALER
ARSALAALASTTVEEGSSAFEEPELAESVSGLLVSRDPSVPTPKAEHLPGLSALLRISRDVGAVLLGASAHRDLDSSWDA
AARLAVADQLRAAASRALLPDEVVARLHEASSLLGVDVVSDAELVVRHDIGEALAPGARICFTGTALDPSGRVVEREEIE
RMAEAAGLKPVRSVTKTRCEVLVTAEAGTQSGKARKAQEYGKPVFTAEEFFAWLSGVTPPT

Specific function: Unknown

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI82546872, Length=431, Percent_Identity=34.5707656612529, Blast_Score=178, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI25143421, Length=416, Percent_Identity=31.4903846153846, Blast_Score=154, Evalue=2e-37,
Organism=Saccharomyces cerevisiae, GI6323579, Length=389, Percent_Identity=30.5912596401028, Blast_Score=134, Evalue=8e-32,
Organism=Saccharomyces cerevisiae, GI6321820, Length=325, Percent_Identity=32.6153846153846, Blast_Score=122, Evalue=2e-28,
Organism=Drosophila melanogaster, GI19920652, Length=422, Percent_Identity=31.9905213270142, Blast_Score=155, Evalue=8e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84317; Mature: 84186

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGDLVLTDEFREALALLAGGRHLFLTGKAGTGKSTLIRRFMAETDRSVVVVAPTGIAAL
CCCCEEEHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCEEEE
NVDGYTIHRLFGFRTTTTLADVTGGDYRPGRFAKTLASLQTLIIDEASMVRADVFDMVAT
ECCCEEEEHHHCCCHHCEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ALEKFGPEPGVPFGGVQVVLVGDLYQLPPVVGDGEEGYFSSVYETPYFFSARKFERAHFP
HHHHHCCCCCCCCCCEEEEEECCHHHCCCCCCCCCCCCHHHHHCCCCEECHHHHHHHCCC
TISLTTVFRQLGDDRMTAILNEIREGVLLGHAQEQLNARADKDFVPPDDEFWLTLAPTNR
EEHHHHHHHHHCCHHHHHHHHHHHHHHEECCCHHHHHCCCCCCCCCCCCCEEEEECCCCC
LVTARNRQHLERLPGDELMHRARESGDLSLFDKPIEDELRFKIGAQVMMLNNDQGDRWVN
EEECCCHHHHHHCCCHHHHHHHHCCCCCEECCCCCHHHHHHEECCEEEEEECCCCCEEEC
GSIGRVVGVGYDRYGVVVEVEFADGSCAEVTPFTWEATRPVVDGGTLRREVIGTFTQLPF
CCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCE
KLAWAITIHKSQGQTLERVVVDLTGGMFSTGQLYVALSRCTSLAGLVLKRPVLPKDLKTD
EEEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHEEHHHHHHHHHHHHHHCCCCCCCCCHH
RRIARFLRTSVSGAGARRYCAIGMLTVGDEGRMSRPRPVELAVAFDDGTAVSTLVNPQRD
HHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCEEHHHCCCHHH
LADARKAYGISVSDVLLAPTLREVWAVIAPMLAGCTPVGPGVDETLGLIDFELKRLGHVA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEE
VMPLGVELRGAQASGRTALERARSALAALASTTVEEGSSAFEEPELAESVSGLLVSRDPS
EEEECEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHCEEEECCCC
VPTPKAEHLPGLSALLRISRDVGAVLLGASAHRDLDSSWDAAARLAVADQLRAAASRALL
CCCCCHHHCCCHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDEVVARLHEASSLLGVDVVSDAELVVRHDIGEALAPGARICFTGTALDPSGRVVEREEI
HHHHHHHHHHHHHHHCEEEECCCCEEEEHHHHHHHCCCCEEEEEECEECCCCCEECHHHH
ERMAEAAGLKPVRSVTKTRCEVLVTAEAGTQSGKARKAQEYGKPVFTAEEFFAWLSGVTP
HHHHHHCCCHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHCCCCCCHHHHHHHHCCCCC
PT
CC
>Mature Secondary Structure 
SGDLVLTDEFREALALLAGGRHLFLTGKAGTGKSTLIRRFMAETDRSVVVVAPTGIAAL
CCCEEEHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCEEEE
NVDGYTIHRLFGFRTTTTLADVTGGDYRPGRFAKTLASLQTLIIDEASMVRADVFDMVAT
ECCCEEEEHHHCCCHHCEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ALEKFGPEPGVPFGGVQVVLVGDLYQLPPVVGDGEEGYFSSVYETPYFFSARKFERAHFP
HHHHHCCCCCCCCCCEEEEEECCHHHCCCCCCCCCCCCHHHHHCCCCEECHHHHHHHCCC
TISLTTVFRQLGDDRMTAILNEIREGVLLGHAQEQLNARADKDFVPPDDEFWLTLAPTNR
EEHHHHHHHHHCCHHHHHHHHHHHHHHEECCCHHHHHCCCCCCCCCCCCCEEEEECCCCC
LVTARNRQHLERLPGDELMHRARESGDLSLFDKPIEDELRFKIGAQVMMLNNDQGDRWVN
EEECCCHHHHHHCCCHHHHHHHHCCCCCEECCCCCHHHHHHEECCEEEEEECCCCCEEEC
GSIGRVVGVGYDRYGVVVEVEFADGSCAEVTPFTWEATRPVVDGGTLRREVIGTFTQLPF
CCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCE
KLAWAITIHKSQGQTLERVVVDLTGGMFSTGQLYVALSRCTSLAGLVLKRPVLPKDLKTD
EEEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHEEHHHHHHHHHHHHHHCCCCCCCCCHH
RRIARFLRTSVSGAGARRYCAIGMLTVGDEGRMSRPRPVELAVAFDDGTAVSTLVNPQRD
HHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCEEHHHCCCHHH
LADARKAYGISVSDVLLAPTLREVWAVIAPMLAGCTPVGPGVDETLGLIDFELKRLGHVA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEE
VMPLGVELRGAQASGRTALERARSALAALASTTVEEGSSAFEEPELAESVSGLLVSRDPS
EEEECEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHCEEEECCCC
VPTPKAEHLPGLSALLRISRDVGAVLLGASAHRDLDSSWDAAARLAVADQLRAAASRALL
CCCCCHHHCCCHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDEVVARLHEASSLLGVDVVSDAELVVRHDIGEALAPGARICFTGTALDPSGRVVEREEI
HHHHHHHHHHHHHHHCEEEECCCCEEEEHHHHHHHCCCCEEEEEECEECCCCCEECHHHH
ERMAEAAGLKPVRSVTKTRCEVLVTAEAGTQSGKARKAQEYGKPVFTAEEFFAWLSGVTP
HHHHHHCCCHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHCCCCCCHHHHHHHHCCCCC
PT
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA