| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797819
Identifier: 108797819
GI number: 108797819
Start: 932051
End: 932299
Strand: Reverse
Name: 108797819
Synonym: Mmcs_0843
Alternate gene names: NA
Gene position: 932299-932051 (Counterclockwise)
Preceding gene: 108797820
Following gene: 108797814
Centisome position: 16.34
GC content: 63.05
Gene sequence:
>249_bases TTGCCGGTCGTTACGGACCCCCGCATCGGCATCACTTTCGGCGCAGCCACCAACGAGGACGTTTTGTACGTTCTCCGCGC CAGCGATCTGATTCTGTGGGAGTCGGGCGTCCGCACCCGCGTGCTGCCTGAGACCCTCAGTGGCCAGCTCACTGCCCGTC TGCAGGTCTACGGCTACCTGGCGTGCTCTGCTGCGCGCTACCCGAAGTCCATCGTCGAAATCGGCGGGTTGACTGCACCG ACCTTTTAA
Upstream 100 bases:
>100_bases AGGATCGTCCCCTGTTCCTTCCGGCGGCCAACAACCCACAGAACGCGATGGGTGTTGTATCCGCGGTGGCCAGCGAGCAA GTCTTGGCCAGGTGCACGGC
Downstream 100 bases:
>100_bases TAGTATTTCTGGCGGCACGCCGCCCGGTAGGGCCGCGTTCTAGTTAACGTATCTTTGTATAACGGCTCCAATAAAGGCCG CGACCATAGCGCCGATTAAC
Product: phage-related major capsid protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MPVVTDPRIGITFGAATNEDVLYVLRASDLILWESGVRTRVLPETLSGQLTARLQVYGYLACSAARYPKSIVEIGGLTAP TF
Sequences:
>Translated_82_residues MPVVTDPRIGITFGAATNEDVLYVLRASDLILWESGVRTRVLPETLSGQLTARLQVYGYLACSAARYPKSIVEIGGLTAP TF >Mature_81_residues PVVTDPRIGITFGAATNEDVLYVLRASDLILWESGVRTRVLPETLSGQLTARLQVYGYLACSAARYPKSIVEIGGLTAPT F
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8871; Mature: 8740
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVVTDPRIGITFGAATNEDVLYVLRASDLILWESGVRTRVLPETLSGQLTARLQVYGYL CCCCCCCCCCEEECCCCCCCEEEEEECCCEEEECCCCCEEECCCCCCCCEEEEEEEEEEE ACSAARYPKSIVEIGGLTAPTF EECCCCCCHHHHHHCCCCCCCC >Mature Secondary Structure PVVTDPRIGITFGAATNEDVLYVLRASDLILWESGVRTRVLPETLSGQLTARLQVYGYL CCCCCCCCCEEECCCCCCCEEEEEECCCEEEECCCCCEEECCCCCCCCEEEEEEEEEEE ACSAARYPKSIVEIGGLTAPTF EECCCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA