| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797800
Identifier: 108797800
GI number: 108797800
Start: 908262
End: 909218
Strand: Direct
Name: 108797800
Synonym: Mmcs_0822
Alternate gene names: NA
Gene position: 908262-909218 (Clockwise)
Preceding gene: 108797799
Following gene: 108797802
Centisome position: 15.92
GC content: 58.83
Gene sequence:
>957_bases ATGACCACACCTCCCGTCCTGGGTCGGCTAGAGGTCATTGAGCCGCGGACCGTGTGGAATCACGAGGCGCACAGTTTCAC TCCCTGGCTGCTACAGAACGTCGACGTCCTGAGTGATCTCCTGGGAATGGACCTCGAGCTTCACGTGGCAGAGCATCCAG TCGGCGACTTCTACTTGGACCTCTACGGCCGGGATGTCGCCGATGACGGAGTGGTGATCGTCGAGAACCAACTGGAACGA TCCGACCACAGCCACCTGGGTCAGATACTCACCTATGCCGCCGGAACCGATCCGAGGACGATCGTGTGGATCACGACCGG GTTTCGGGCTGAACATCGTGCCGCACTGGATTGGTTGAACGAACACACTGATCCTGACACACGGTTCTTCGGCATCGAGA TCGAAGTCGTCAAGATCGGTGCCTCAGCGCCGGCCCCGAACTTCAAACTTGTTGTCAGCCCCAACGACTGGAGTAAGCAA GTCAAGGCCGCTGCTGACGCAAGTCAGTTCACGGATCTTTCCAAGGCGTACTGGGATTTCTGGCGACAGTTCCTCGACCG CATCGCCGCGGAACACCCCACCTGGACGCGCGCGAAGGCTTCGACGAAGGATTCCTGGTACAACCTCTCCACGGGCATCA GCGGCATCTCACTCGCCACGGCGTTCCGCCGCGATACCGGACTGACAGTCCTCCTCGAATTCGACTCGTCGGATGCAACG CGGAACAAGGAACGCTTCGAGGCGCTCAAGTCCAAGCAAGCGGAATTCGAAGCAATTCTCGGTGGACCCGCGGTTTGGGA CGAACGACCCGATGCGAAGAGTTGCGCGGTGTTCGTGTCGTCAGAATTCACCAGCGTGATGGATGCGGCTCAATGGACGG CGATGCAAGACTGGTTGCTTGGTCAACACGCCAAGTTCAGAGATGCTCTGGAGGTCGTTCGAGGCATGGGTGTTTAG
Upstream 100 bases:
>100_bases CGGACGTATCGGTTTCGCAGACGCGGCCAACGATCCTCGAGTTGGTAGGTGCACGTGGAGCCAACTGAGCGGATAACCAA TAACGCAAGGAGACGATGTC
Downstream 100 bases:
>100_bases TCTCACCCTGCGACGCCATCCTTGATCATCTGCTCAATCTCGTCAACTGTTTTCAACATGAGATGACTGAAGATTGTGGC CTGTGGCTCCGGGAGACGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MTTPPVLGRLEVIEPRTVWNHEAHSFTPWLLQNVDVLSDLLGMDLELHVAEHPVGDFYLDLYGRDVADDGVVIVENQLER SDHSHLGQILTYAAGTDPRTIVWITTGFRAEHRAALDWLNEHTDPDTRFFGIEIEVVKIGASAPAPNFKLVVSPNDWSKQ VKAAADASQFTDLSKAYWDFWRQFLDRIAAEHPTWTRAKASTKDSWYNLSTGISGISLATAFRRDTGLTVLLEFDSSDAT RNKERFEALKSKQAEFEAILGGPAVWDERPDAKSCAVFVSSEFTSVMDAAQWTAMQDWLLGQHAKFRDALEVVRGMGV
Sequences:
>Translated_318_residues MTTPPVLGRLEVIEPRTVWNHEAHSFTPWLLQNVDVLSDLLGMDLELHVAEHPVGDFYLDLYGRDVADDGVVIVENQLER SDHSHLGQILTYAAGTDPRTIVWITTGFRAEHRAALDWLNEHTDPDTRFFGIEIEVVKIGASAPAPNFKLVVSPNDWSKQ VKAAADASQFTDLSKAYWDFWRQFLDRIAAEHPTWTRAKASTKDSWYNLSTGISGISLATAFRRDTGLTVLLEFDSSDAT RNKERFEALKSKQAEFEAILGGPAVWDERPDAKSCAVFVSSEFTSVMDAAQWTAMQDWLLGQHAKFRDALEVVRGMGV >Mature_317_residues TTPPVLGRLEVIEPRTVWNHEAHSFTPWLLQNVDVLSDLLGMDLELHVAEHPVGDFYLDLYGRDVADDGVVIVENQLERS DHSHLGQILTYAAGTDPRTIVWITTGFRAEHRAALDWLNEHTDPDTRFFGIEIEVVKIGASAPAPNFKLVVSPNDWSKQV KAAADASQFTDLSKAYWDFWRQFLDRIAAEHPTWTRAKASTKDSWYNLSTGISGISLATAFRRDTGLTVLLEFDSSDATR NKERFEALKSKQAEFEAILGGPAVWDERPDAKSCAVFVSSEFTSVMDAAQWTAMQDWLLGQHAKFRDALEVVRGMGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35664; Mature: 35533
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPPVLGRLEVIEPRTVWNHEAHSFTPWLLQNVDVLSDLLGMDLELHVAEHPVGDFYLD CCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEE LYGRDVADDGVVIVENQLERSDHSHLGQILTYAAGTDPRTIVWITTGFRAEHRAALDWLN ECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHH EHTDPDTRFFGIEIEVVKIGASAPAPNFKLVVSPNDWSKQVKAAADASQFTDLSKAYWDF CCCCCCCEEEEEEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH WRQFLDRIAAEHPTWTRAKASTKDSWYNLSTGISGISLATAFRRDTGLTVLLEFDSSDAT HHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCC RNKERFEALKSKQAEFEAILGGPAVWDERPDAKSCAVFVSSEFTSVMDAAQWTAMQDWLL CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH GQHAKFRDALEVVRGMGV CCCHHHHHHHHHHHHCCC >Mature Secondary Structure TTPPVLGRLEVIEPRTVWNHEAHSFTPWLLQNVDVLSDLLGMDLELHVAEHPVGDFYLD CCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEE LYGRDVADDGVVIVENQLERSDHSHLGQILTYAAGTDPRTIVWITTGFRAEHRAALDWLN ECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHH EHTDPDTRFFGIEIEVVKIGASAPAPNFKLVVSPNDWSKQVKAAADASQFTDLSKAYWDF CCCCCCCEEEEEEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH WRQFLDRIAAEHPTWTRAKASTKDSWYNLSTGISGISLATAFRRDTGLTVLLEFDSSDAT HHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCC RNKERFEALKSKQAEFEAILGGPAVWDERPDAKSCAVFVSSEFTSVMDAAQWTAMQDWLL CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH GQHAKFRDALEVVRGMGV CCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA