| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108797778
Identifier: 108797778
GI number: 108797778
Start: 863457
End: 864530
Strand: Reverse
Name: 108797778
Synonym: Mmcs_0800
Alternate gene names: NA
Gene position: 864530-863457 (Counterclockwise)
Preceding gene: 108797779
Following gene: 108797777
Centisome position: 15.15
GC content: 68.62
Gene sequence:
>1074_bases ATGGTTGATTCCTGGGAGCTGATCCTCCACCACACCTACGCGGGCACGCCCGGGGTCATCTTCGACCACTCGCCTCGGCG CGGAAGCCACGGCACCGCGGTCAATCTCGCCGACGCCGACTTCCACACCGACGGAGCCACCCACGGCTCCGGGGCGGTCT CCTTCCACCCCGGCGCGAAGGTCGCCGTCCCCGCCAAAGACGGGTGGAGTCCGCTCTCCGGTGTGCGCGGCGAAGTGACA TGCCGGTTCGACACCACCTCGGGCATCGACGTGCTCATCGACGCCAAATCTTTCTACTTCTACCGGCGCAGCGGCGCGCT CGGCTGCTGGTTCGACGAGTCGCCGCACCAATACACCGACATCACAACAGATCTCAACGCCATCGGCGCGCCGGTCTCCA TACCCGTCGGCCAGTGGGTCCAAGTGGGTTTCATGCACGACGGCGTCTCGACCGCCGAGCTCTCCTTCGACGGCATCCCG GTCGCCCGCATCATCCGGCCGCTGCGGCCCGTCAAACCCACCGACGCCGTCGCCATCGGCGACTTCGTGACCGCCCCCGC CCCATCCACGTCCGGGATGTCGGGCCGCATCGACGACGTGCGGGTGTGGCGCCTCGACCCCGACCGCATCGCCCGCGCAT TCATCGACCGGCCGATGGACCCCGCCACGGCCGAGTGCTGGGCCGAGTGGTTCGACCAACTGGCCGCGGCGTTCGACACG CTGCGCCAGACCAACCCCGACTGCCCAGACCGCATCGCCGGGCTCGTCGACGAGGCGGTCCACAGCGGCCTGGCCGATGC GCTGACCCGCACCGCGCAGAGCCGGTCGACATGGCTGCAGTCGGCGGCGGACTACCAACAGCACTGGGCGGCAGGCAACC TCGCGAGCATCGCACCGGTCATCGCCGGCCTCACCACGTGGCTGCAGTCCGAAGGCGTTGACCTCAAACAGAATTCGGCG CTTCAGGACCTATTGAACGACCCGTGTTGGAAGCAGCTGCTGTCGCTGGTGCCGCCGATGACGTGCGACCCCGCCTTCAC CGACCTCCTCAGTGGCGGGACCGGCGCATGGTAG
Upstream 100 bases:
>100_bases GGTCCTGCACTTCGTCCGCTCGCACCTCTGAAATCCGCCTACACAGCCACACCTGTGCGCTAGCGTCATCGTCAGCGATG GCCGACGCGGGTGGGCACAC
Downstream 100 bases:
>100_bases CCCGCAACCCGCTCACCTCGGGCAGTAACACCGGCAACGCCATGTCGTACACCACCGACCAGATCACGCCCGCCCCTGCG GCGCTGGTGTTGGTGTTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MVDSWELILHHTYAGTPGVIFDHSPRRGSHGTAVNLADADFHTDGATHGSGAVSFHPGAKVAVPAKDGWSPLSGVRGEVT CRFDTTSGIDVLIDAKSFYFYRRSGALGCWFDESPHQYTDITTDLNAIGAPVSIPVGQWVQVGFMHDGVSTAELSFDGIP VARIIRPLRPVKPTDAVAIGDFVTAPAPSTSGMSGRIDDVRVWRLDPDRIARAFIDRPMDPATAECWAEWFDQLAAAFDT LRQTNPDCPDRIAGLVDEAVHSGLADALTRTAQSRSTWLQSAADYQQHWAAGNLASIAPVIAGLTTWLQSEGVDLKQNSA LQDLLNDPCWKQLLSLVPPMTCDPAFTDLLSGGTGAW
Sequences:
>Translated_357_residues MVDSWELILHHTYAGTPGVIFDHSPRRGSHGTAVNLADADFHTDGATHGSGAVSFHPGAKVAVPAKDGWSPLSGVRGEVT CRFDTTSGIDVLIDAKSFYFYRRSGALGCWFDESPHQYTDITTDLNAIGAPVSIPVGQWVQVGFMHDGVSTAELSFDGIP VARIIRPLRPVKPTDAVAIGDFVTAPAPSTSGMSGRIDDVRVWRLDPDRIARAFIDRPMDPATAECWAEWFDQLAAAFDT LRQTNPDCPDRIAGLVDEAVHSGLADALTRTAQSRSTWLQSAADYQQHWAAGNLASIAPVIAGLTTWLQSEGVDLKQNSA LQDLLNDPCWKQLLSLVPPMTCDPAFTDLLSGGTGAW >Mature_357_residues MVDSWELILHHTYAGTPGVIFDHSPRRGSHGTAVNLADADFHTDGATHGSGAVSFHPGAKVAVPAKDGWSPLSGVRGEVT CRFDTTSGIDVLIDAKSFYFYRRSGALGCWFDESPHQYTDITTDLNAIGAPVSIPVGQWVQVGFMHDGVSTAELSFDGIP VARIIRPLRPVKPTDAVAIGDFVTAPAPSTSGMSGRIDDVRVWRLDPDRIARAFIDRPMDPATAECWAEWFDQLAAAFDT LRQTNPDCPDRIAGLVDEAVHSGLADALTRTAQSRSTWLQSAADYQQHWAAGNLASIAPVIAGLTTWLQSEGVDLKQNSA LQDLLNDPCWKQLLSLVPPMTCDPAFTDLLSGGTGAW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38436; Mature: 38436
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDSWELILHHTYAGTPGVIFDHSPRRGSHGTAVNLADADFHTDGATHGSGAVSFHPGAK CCCCEEEEEEEECCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCE VAVPAKDGWSPLSGVRGEVTCRFDTTSGIDVLIDAKSFYFYRRSGALGCWFDESPHQYTD EEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCEEEEECCCCEEEEECCCCCCHHC ITTDLNAIGAPVSIPVGQWVQVGFMHDGVSTAELSFDGIPVARIIRPLRPVKPTDAVAIG HHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHCCCCCCCCCEEEC DFVTAPAPSTSGMSGRIDDVRVWRLDPDRIARAFIDRPMDPATAECWAEWFDQLAAAFDT CHHCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LRQTNPDCPDRIAGLVDEAVHSGLADALTRTAQSRSTWLQSAADYQQHWAAGNLASIAPV HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH IAGLTTWLQSEGVDLKQNSALQDLLNDPCWKQLLSLVPPMTCDPAFTDLLSGGTGAW HHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure MVDSWELILHHTYAGTPGVIFDHSPRRGSHGTAVNLADADFHTDGATHGSGAVSFHPGAK CCCCEEEEEEEECCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCE VAVPAKDGWSPLSGVRGEVTCRFDTTSGIDVLIDAKSFYFYRRSGALGCWFDESPHQYTD EEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCEEEEECCCCEEEEECCCCCCHHC ITTDLNAIGAPVSIPVGQWVQVGFMHDGVSTAELSFDGIPVARIIRPLRPVKPTDAVAIG HHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHCCCCCCCCCEEEC DFVTAPAPSTSGMSGRIDDVRVWRLDPDRIARAFIDRPMDPATAECWAEWFDQLAAAFDT CHHCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LRQTNPDCPDRIAGLVDEAVHSGLADALTRTAQSRSTWLQSAADYQQHWAAGNLASIAPV HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH IAGLTTWLQSEGVDLKQNSALQDLLNDPCWKQLLSLVPPMTCDPAFTDLLSGGTGAW HHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA