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The map label for this gene is ydeP [C]

Identifier: 108797697

GI number: 108797697

Start: 768300

End: 770624

Strand: Reverse

Name: ydeP [C]

Synonym: Mmcs_0718

Alternate gene names: 108797697

Gene position: 770624-768300 (Counterclockwise)

Preceding gene: 108797699

Following gene: 108797694

Centisome position: 13.51

GC content: 68.34

Gene sequence:

>2325_bases
GTGAACAGCCGCCGCCGACCGCACCACGACTACGACGCATCCTTCGACGAGCATGCGATCGTCACCTCCGAACCCAAGAC
TGAGGCCGCCGGCGTCAAGGCGGTGATGGTGTCGCTCAAACGCGGCGTCGAGCAGATGGGGGCGGTGCGCACCGCGACGG
CACTGACGCGGCTCAACCAGCGGCACGGTTTCGACTGTCCCGGCTGCGCCTGGCCCGAGGACGCGGGCGGTCGGAAGCTC
GCCGAGTTCTGCGAGAACGGCGCCAAAGCCGTCGCCGAGGAAGCCACCCGTCGGGTCGTGACGCCCGAGTTCTTCGCCCG
CCATTCGGTCGCCGAACTCGGCGGGCGGCCCGAGTACTGGCTGTCCCAGCAGGGCCGCCTCACGCATCCGGTGGTGTTGC
GTCCGGGTGCCACCCATTACGAACCGATCGCCTGGGACGACGCGTACCGGCTGATCGCCGACGAACTGCGCGCGCTCGCC
GACCCCGACGAAGCGGTGTTCTACACCTCCGGCCGCACCAGCAACGAGGCCGCGTTCCTCTATCAGTTGCTGGTCCGCAG
CTTCGGCACCAACAACCTGCCCGACTGCTCGAACATGTGCCACGAGTCGTCGGGGGCGGCGTTGACGGAGTCGATCGGCA
TCGGAAAAGGCTCGGTCACCGTGGCCGACGTCGAACACGCTGACCTCATCGTCATCGCCGGGCAGAACCCGGGCACCAAC
CATCCGCGGATGCTCTCGGTGTTGGAGAAGGCCAAGGCCAACGGTGCGATCGTCGTCGCGATCAATCCGCTGCCCGAGGC
CGGCCTCATGCGCTTCAAGGATCCGCAGAAGGTGCACGGCGTGATCGGCCACGGGGTGGCCATCGCCGACGAGTTCGTCC
AGATCCGCCTCGGCGGTGACATGGCGCTGTTCGCCGGGCTGGGGCGGCTACTGCTGGAAGCCGAGGACGCGGCTCCCGGC
ACGGTGCTCGATCGGGCGTTCGTCGACGGGCACTGCGCGGGATTCGCCGACTACGAGGCCCAGGCGCGCGCGGTCGACCT
CGACACCGTCACCGAGGCAACGGGTGTCGGCCGCGAACAACTGCAGCGCATCGCCCGCCTGCTGATCGACTCCGAGCGCA
CGGTGCTGTGCTGGGCGATGGGACTGACGCAGCACCGCCACGCCGTCGCCACCATCGGCGAAGCCACGAACCTGCTGCTC
ATGCGCGGCATGATCGGTAAACCCGGCGCCGGACTGTGCCCGGTGCGCGGCCACTCGAACGTCCAGGGTGACCGCACGAT
GGGCATCTGGGAGAAGATGCCCGAGACGTTCCTGGCGGCGCTCGACGAACGGTTCGGCATCACAAGCCCCCGCAAGCACG
GTATGGACACCGTCGACGCGATCCGGGCGATGCGCGACGGCCGCGCCAAGGTGTTCATCGGAATGGGGGGCAACTTCTCA
TCGGCCACCCCCGACACCGGCGTCACCGAGGCGGCACTGCGCAATTGCACACTCACAGTGCAGATCTCGACGAAGCTCAA
CCGCAGCCACCTCGTACACGGCCGAACCGCGATCATCCTGCCCACGCTGGGCCGTACCGACCGCGACGTCCAGGCCGGCG
GCAAACAGGTGGTGTCGGTGGAGGATTCGATGTCGATGGTGCACCTGTCACGCGGGAGCCTGCACCCGCCGAGTGATCAG
GTGCGCAGTGAGGTCGCGATCGTCTGCCAGTTGGCGCGGACACTGTTCGGTGCCGATCATCCGGTGCCGTGGGACTGGTT
CGTCGCCGACTACGACCGCATCCGGGACGCGATCGCCGCCGTGGTACCCGGCTGCGCCGACTACAACGCCAGGGTCCGCA
GGCTCGACGGATTCCAGCTCCCCCACCCGCCCCGCGACGCCCGCGAATTCCACACGCACACCGGCAAAGCCAACTTCGCG
GTCAACCCGCTGGAATGGGTGCCGGTGCCGCCGGGACGGCTGGTGCTGCAGACGCTGCGCAGCCACGACCAGTACAACAC
CACGATCTACGGGCTCGACGATCGCTACCGTGGGGTCAAGGGCGGCCGTCGCGTGGTGTTCGTGAACCCCGCCGACATCG
AGTCGCTGGGGTTGCGCGACGGGCAGCGCGTCAGCCTGATCTCGGAGTTCCCCGACGCCGACGGGTCGATCGTGGAGCGG
CGTGTGGACGACTTCCTGGTGGTGCCCTACTCGACTCCGGTGGGCAATGCGGCCGCCTACTATCCCGAGACCAACCCCCT
GGTGCCGCTGGATCACACCGCCGCGAAGTCGAACACCCCGGTGTCCAAGGCCGTGGTGGTCCGGCTCGAAGCGGCACAGC
CGTGA

Upstream 100 bases:

>100_bases
TGCGCCGCGTGGTGGCGGCGGACACGAGGAAGGTCCAAACCCGTTCGCACAGTTGCGGTCCGCGCACAGCATCAGTGAAG
GCCGAAGGTAGGATCCGCGG

Downstream 100 bases:

>100_bases
CGCACGCCGAGGGTCAGACCTCGGCGGCGGTCCAGTCGTACGGCAGGAACTTGCCGTCGAGCATCACCACCACGCGGTCG
CCGGCGGGATGCGGTTTGCG

Product: oxidoreductase alpha (molybdopterin) subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 774; Mature: 774

Protein sequence:

>774_residues
MNSRRRPHHDYDASFDEHAIVTSEPKTEAAGVKAVMVSLKRGVEQMGAVRTATALTRLNQRHGFDCPGCAWPEDAGGRKL
AEFCENGAKAVAEEATRRVVTPEFFARHSVAELGGRPEYWLSQQGRLTHPVVLRPGATHYEPIAWDDAYRLIADELRALA
DPDEAVFYTSGRTSNEAAFLYQLLVRSFGTNNLPDCSNMCHESSGAALTESIGIGKGSVTVADVEHADLIVIAGQNPGTN
HPRMLSVLEKAKANGAIVVAINPLPEAGLMRFKDPQKVHGVIGHGVAIADEFVQIRLGGDMALFAGLGRLLLEAEDAAPG
TVLDRAFVDGHCAGFADYEAQARAVDLDTVTEATGVGREQLQRIARLLIDSERTVLCWAMGLTQHRHAVATIGEATNLLL
MRGMIGKPGAGLCPVRGHSNVQGDRTMGIWEKMPETFLAALDERFGITSPRKHGMDTVDAIRAMRDGRAKVFIGMGGNFS
SATPDTGVTEAALRNCTLTVQISTKLNRSHLVHGRTAIILPTLGRTDRDVQAGGKQVVSVEDSMSMVHLSRGSLHPPSDQ
VRSEVAIVCQLARTLFGADHPVPWDWFVADYDRIRDAIAAVVPGCADYNARVRRLDGFQLPHPPRDAREFHTHTGKANFA
VNPLEWVPVPPGRLVLQTLRSHDQYNTTIYGLDDRYRGVKGGRRVVFVNPADIESLGLRDGQRVSLISEFPDADGSIVER
RVDDFLVVPYSTPVGNAAAYYPETNPLVPLDHTAAKSNTPVSKAVVVRLEAAQP

Sequences:

>Translated_774_residues
MNSRRRPHHDYDASFDEHAIVTSEPKTEAAGVKAVMVSLKRGVEQMGAVRTATALTRLNQRHGFDCPGCAWPEDAGGRKL
AEFCENGAKAVAEEATRRVVTPEFFARHSVAELGGRPEYWLSQQGRLTHPVVLRPGATHYEPIAWDDAYRLIADELRALA
DPDEAVFYTSGRTSNEAAFLYQLLVRSFGTNNLPDCSNMCHESSGAALTESIGIGKGSVTVADVEHADLIVIAGQNPGTN
HPRMLSVLEKAKANGAIVVAINPLPEAGLMRFKDPQKVHGVIGHGVAIADEFVQIRLGGDMALFAGLGRLLLEAEDAAPG
TVLDRAFVDGHCAGFADYEAQARAVDLDTVTEATGVGREQLQRIARLLIDSERTVLCWAMGLTQHRHAVATIGEATNLLL
MRGMIGKPGAGLCPVRGHSNVQGDRTMGIWEKMPETFLAALDERFGITSPRKHGMDTVDAIRAMRDGRAKVFIGMGGNFS
SATPDTGVTEAALRNCTLTVQISTKLNRSHLVHGRTAIILPTLGRTDRDVQAGGKQVVSVEDSMSMVHLSRGSLHPPSDQ
VRSEVAIVCQLARTLFGADHPVPWDWFVADYDRIRDAIAAVVPGCADYNARVRRLDGFQLPHPPRDAREFHTHTGKANFA
VNPLEWVPVPPGRLVLQTLRSHDQYNTTIYGLDDRYRGVKGGRRVVFVNPADIESLGLRDGQRVSLISEFPDADGSIVER
RVDDFLVVPYSTPVGNAAAYYPETNPLVPLDHTAAKSNTPVSKAVVVRLEAAQP
>Mature_774_residues
MNSRRRPHHDYDASFDEHAIVTSEPKTEAAGVKAVMVSLKRGVEQMGAVRTATALTRLNQRHGFDCPGCAWPEDAGGRKL
AEFCENGAKAVAEEATRRVVTPEFFARHSVAELGGRPEYWLSQQGRLTHPVVLRPGATHYEPIAWDDAYRLIADELRALA
DPDEAVFYTSGRTSNEAAFLYQLLVRSFGTNNLPDCSNMCHESSGAALTESIGIGKGSVTVADVEHADLIVIAGQNPGTN
HPRMLSVLEKAKANGAIVVAINPLPEAGLMRFKDPQKVHGVIGHGVAIADEFVQIRLGGDMALFAGLGRLLLEAEDAAPG
TVLDRAFVDGHCAGFADYEAQARAVDLDTVTEATGVGREQLQRIARLLIDSERTVLCWAMGLTQHRHAVATIGEATNLLL
MRGMIGKPGAGLCPVRGHSNVQGDRTMGIWEKMPETFLAALDERFGITSPRKHGMDTVDAIRAMRDGRAKVFIGMGGNFS
SATPDTGVTEAALRNCTLTVQISTKLNRSHLVHGRTAIILPTLGRTDRDVQAGGKQVVSVEDSMSMVHLSRGSLHPPSDQ
VRSEVAIVCQLARTLFGADHPVPWDWFVADYDRIRDAIAAVVPGCADYNARVRRLDGFQLPHPPRDAREFHTHTGKANFA
VNPLEWVPVPPGRLVLQTLRSHDQYNTTIYGLDDRYRGVKGGRRVVFVNPADIESLGLRDGQRVSLISEFPDADGSIVER
RVDDFLVVPYSTPVGNAAAYYPETNPLVPLDHTAAKSNTPVSKAVVVRLEAAQP

Specific function: Unknown

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787778, Length=747, Percent_Identity=43.7751004016064, Blast_Score=615, Evalue=1e-177,
Organism=Escherichia coli, GI3868721, Length=317, Percent_Identity=30.5993690851735, Blast_Score=160, Evalue=4e-40,
Organism=Escherichia coli, GI1788534, Length=400, Percent_Identity=24.75, Blast_Score=99, Evalue=2e-21,
Organism=Escherichia coli, GI3868720, Length=501, Percent_Identity=20.5588822355289, Blast_Score=88, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR010046 [H]

Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: NA

Molecular weight: Translated: 84040; Mature: 84040

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: PS00075 DHFR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSRRRPHHDYDASFDEHAIVTSEPKTEAAGVKAVMVSLKRGVEQMGAVRTATALTRLNQ
CCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHGFDCPGCAWPEDAGGRKLAEFCENGAKAVAEEATRRVVTPEFFARHSVAELGGRPEYW
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHH
LSQQGRLTHPVVLRPGATHYEPIAWDDAYRLIADELRALADPDEAVFYTSGRTSNEAAFL
HCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHH
YQLLVRSFGTNNLPDCSNMCHESSGAALTESIGIGKGSVTVADVEHADLIVIAGQNPGTN
HHHHHHHCCCCCCCCHHHHHHCCCCCEEHHHCCCCCCCEEEEEECCCCEEEEECCCCCCC
HPRMLSVLEKAKANGAIVVAINPLPEAGLMRFKDPQKVHGVIGHGVAIADEFVQIRLGGD
CHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCHHEEEEEEEEEECCC
MALFAGLGRLLLEAEDAAPGTVLDRAFVDGHCAGFADYEAQARAVDLDTVTEATGVGREQ
CHHHHHHHHHHEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEECHHHHHHHHCCCHHH
LQRIARLLIDSERTVLCWAMGLTQHRHAVATIGEATNLLLMRGMIGKPGAGLCPVRGHSN
HHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
VQGDRTMGIWEKMPETFLAALDERFGITSPRKHGMDTVDAIRAMRDGRAKVFIGMGGNFS
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHCCCEEEEEEECCCCC
SATPDTGVTEAALRNCTLTVQISTKLNRSHLVHGRTAIILPTLGRTDRDVQAGGKQVVSV
CCCCCCCHHHHHHHCCEEEEEEECCCCCHHEECCCEEEEEECCCCCCCHHHCCCCEEEEE
EDSMSMVHLSRGSLHPPSDQVRSEVAIVCQLARTLFGADHPVPWDWFVADYDRIRDAIAA
CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
VVPGCADYNARVRRLDGFQLPHPPRDAREFHTHTGKANFAVNPLEWVPVPPGRLVLQTLR
HCCCCCCCCCHHEECCCCCCCCCCCHHHHHHHCCCCCCEEECCCEEECCCCHHHHHHHHH
SHDQYNTTIYGLDDRYRGVKGGRRVVFVNPADIESLGLRDGQRVSLISEFPDADGSIVER
CCCCCCCEEEECCHHHCCCCCCCEEEEECCCCHHHCCCCCCCEEEHHHHCCCCCCHHHHH
RVDDFLVVPYSTPVGNAAAYYPETNPLVPLDHTAAKSNTPVSKAVVVRLEAAQP
CCCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC
>Mature Secondary Structure
MNSRRRPHHDYDASFDEHAIVTSEPKTEAAGVKAVMVSLKRGVEQMGAVRTATALTRLNQ
CCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHGFDCPGCAWPEDAGGRKLAEFCENGAKAVAEEATRRVVTPEFFARHSVAELGGRPEYW
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHH
LSQQGRLTHPVVLRPGATHYEPIAWDDAYRLIADELRALADPDEAVFYTSGRTSNEAAFL
HCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHH
YQLLVRSFGTNNLPDCSNMCHESSGAALTESIGIGKGSVTVADVEHADLIVIAGQNPGTN
HHHHHHHCCCCCCCCHHHHHHCCCCCEEHHHCCCCCCCEEEEEECCCCEEEEECCCCCCC
HPRMLSVLEKAKANGAIVVAINPLPEAGLMRFKDPQKVHGVIGHGVAIADEFVQIRLGGD
CHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCHHEEEEEEEEEECCC
MALFAGLGRLLLEAEDAAPGTVLDRAFVDGHCAGFADYEAQARAVDLDTVTEATGVGREQ
CHHHHHHHHHHEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEECHHHHHHHHCCCHHH
LQRIARLLIDSERTVLCWAMGLTQHRHAVATIGEATNLLLMRGMIGKPGAGLCPVRGHSN
HHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
VQGDRTMGIWEKMPETFLAALDERFGITSPRKHGMDTVDAIRAMRDGRAKVFIGMGGNFS
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHCCCEEEEEEECCCCC
SATPDTGVTEAALRNCTLTVQISTKLNRSHLVHGRTAIILPTLGRTDRDVQAGGKQVVSV
CCCCCCCHHHHHHHCCEEEEEEECCCCCHHEECCCEEEEEECCCCCCCHHHCCCCEEEEE
EDSMSMVHLSRGSLHPPSDQVRSEVAIVCQLARTLFGADHPVPWDWFVADYDRIRDAIAA
CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
VVPGCADYNARVRRLDGFQLPHPPRDAREFHTHTGKANFAVNPLEWVPVPPGRLVLQTLR
HCCCCCCCCCHHEECCCCCCCCCCCHHHHHHHCCCCCCEEECCCEEECCCCHHHHHHHHH
SHDQYNTTIYGLDDRYRGVKGGRRVVFVNPADIESLGLRDGQRVSLISEFPDADGSIVER
CCCCCCCEEEECCHHHCCCCCCCEEEEECCCCHHHCCCCCCCEEEHHHHCCCCCCHHHHH
RVDDFLVVPYSTPVGNAAAYYPETNPLVPLDHTAAKSNTPVSKAVVVRLEAAQP
CCCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]