| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108797480
Identifier: 108797480
GI number: 108797480
Start: 556326
End: 557348
Strand: Direct
Name: 108797480
Synonym: Mmcs_0500
Alternate gene names: NA
Gene position: 556326-557348 (Clockwise)
Preceding gene: 108797478
Following gene: 108797482
Centisome position: 9.75
GC content: 74.1
Gene sequence:
>1023_bases ATGACATCACCACTGAGCGCCCTGGGCGTCCGACTTCCGGTTATCGCCGCACCGATGGCGGGCGGTGCCACCACCACCGA CATGGTGGTCGCCGCCGCCCGGGCCGGCAGCCTGGGACTGCTCGCGGCAGGGTACAAGACTCCCGACGCCCTGCAGGCCG AGATCGCGACGGTGCGCGCCGCGTCGATCCCGTTCGGCGTCAACGTCTTCGCGCCGAACCCGGTCCCCATTGGCATCGCG GCCTACCGCCGCTACGCAGCGCTCATCCAGCCCGAGGCCGACCGGTTCGGGCTCACCCTGCCCCCGGATCCGATCGATGA CGACGACGCGTTCGGCGCGAAGGTCGATCTGCTGCGCGCCGACCCGGTGCCGATCGTGAGCTTCACCTTCGGGCTCCCGG CGAGCGACGTCATTCGCGCTCTGCAGAAGGCGGGCACGACCGTGGTGCAGACCGTCACCTCACCGCAGGAGGCCGAGGCG GCCGCCGCTGCGGGCGTCGACATGCTCGCCGTGCAGGCGTCGGTCGCCGGCGGCCACTCCGGCACCTTCACCCCCGACCG GATGGATGCGCCGGTCGTGCTGACAGAGCTGGTGCGGGCGGTGGTCACCCGGGTCGGCCTGCCCGTCATCGCGGCCGGGG GACTGGCCACCCCCGCCGACGTGACCGCGGTCCTGCATGCCGGGGCCGCCGCCGCGGCGGTCGGCACGGTGCTGCTGCGG GCCGACGAGAGCGGCGCCTCGGCGACTCACAGGGCGGCGCTGGCCGATCCGACGCGCACCGAGACCGTCATCACCCGCGC GTTCACCGGGCGCCCGGCGCGCGGCCTGCGTAACCGGTTCATCGACCGGTTCGAGGCGGACGCGCCGCTGGGGTATCCCG CCGTCCACCACCTGACGAGTCCGCTGCGCAAGGCGGCGGCGGCCGGCGGCGACGCCGACCTGGTCCACCTGTGGGCCGGC ACCGGCTACCGCCACGCCGCCGAGAAGCCGACGGCGACGATCCTGACCGAGCTGGCCAGCTAG
Upstream 100 bases:
>100_bases TTTTCGGTGTTCATGGCGCCTCCTCCAGTTCGGACTTCCGGGGGAACGCCGATCGCGCTGACGACATTCCCCGTGGCACC ATCACAGGCGAGGAGCATCG
Downstream 100 bases:
>100_bases GCCGGCTCGATCGGCGGCGCGGCGATCCCGGCGCGCTTGGCGGCCTTGCGGCGTTTGTACCACTCGAGCAGCATCGGGGC GACGGAGACGATCACGATCG
Product: 2-nitropropane dioxygenase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MTSPLSALGVRLPVIAAPMAGGATTTDMVVAAARAGSLGLLAAGYKTPDALQAEIATVRAASIPFGVNVFAPNPVPIGIA AYRRYAALIQPEADRFGLTLPPDPIDDDDAFGAKVDLLRADPVPIVSFTFGLPASDVIRALQKAGTTVVQTVTSPQEAEA AAAAGVDMLAVQASVAGGHSGTFTPDRMDAPVVLTELVRAVVTRVGLPVIAAGGLATPADVTAVLHAGAAAAAVGTVLLR ADESGASATHRAALADPTRTETVITRAFTGRPARGLRNRFIDRFEADAPLGYPAVHHLTSPLRKAAAAGGDADLVHLWAG TGYRHAAEKPTATILTELAS
Sequences:
>Translated_340_residues MTSPLSALGVRLPVIAAPMAGGATTTDMVVAAARAGSLGLLAAGYKTPDALQAEIATVRAASIPFGVNVFAPNPVPIGIA AYRRYAALIQPEADRFGLTLPPDPIDDDDAFGAKVDLLRADPVPIVSFTFGLPASDVIRALQKAGTTVVQTVTSPQEAEA AAAAGVDMLAVQASVAGGHSGTFTPDRMDAPVVLTELVRAVVTRVGLPVIAAGGLATPADVTAVLHAGAAAAAVGTVLLR ADESGASATHRAALADPTRTETVITRAFTGRPARGLRNRFIDRFEADAPLGYPAVHHLTSPLRKAAAAGGDADLVHLWAG TGYRHAAEKPTATILTELAS >Mature_339_residues TSPLSALGVRLPVIAAPMAGGATTTDMVVAAARAGSLGLLAAGYKTPDALQAEIATVRAASIPFGVNVFAPNPVPIGIAA YRRYAALIQPEADRFGLTLPPDPIDDDDAFGAKVDLLRADPVPIVSFTFGLPASDVIRALQKAGTTVVQTVTSPQEAEAA AAAGVDMLAVQASVAGGHSGTFTPDRMDAPVVLTELVRAVVTRVGLPVIAAGGLATPADVTAVLHAGAAAAAVGTVLLRA DESGASATHRAALADPTRTETVITRAFTGRPARGLRNRFIDRFEADAPLGYPAVHHLTSPLRKAAAAGGDADLVHLWAGT GYRHAAEKPTATILTELAS
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322609, Length=332, Percent_Identity=27.4096385542169, Blast_Score=89, Evalue=9e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 34547; Mature: 34416
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPLSALGVRLPVIAAPMAGGATTTDMVVAAARAGSLGLLAAGYKTPDALQAEIATVRA CCCCHHHHHCCCCEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHEE ASIPFGVNVFAPNPVPIGIAAYRRYAALIQPEADRFGLTLPPDPIDDDDAFGAKVDLLRA ECCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC DPVPIVSFTFGLPASDVIRALQKAGTTVVQTVTSPQEAEAAAAAGVDMLAVQASVAGGHS CCCCEEEEECCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCHHEEEEHHHCCCCC GTFTPDRMDAPVVLTELVRAVVTRVGLPVIAAGGLATPADVTAVLHAGAAAAAVGTVLLR CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHCCHHHHHHHHHEEE ADESGASATHRAALADPTRTETVITRAFTGRPARGLRNRFIDRFEADAPLGYPAVHHLTS ECCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH PLRKAAAAGGDADLVHLWAGTGYRHAAEKPTATILTELAS HHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure TSPLSALGVRLPVIAAPMAGGATTTDMVVAAARAGSLGLLAAGYKTPDALQAEIATVRA CCCHHHHHCCCCEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHEE ASIPFGVNVFAPNPVPIGIAAYRRYAALIQPEADRFGLTLPPDPIDDDDAFGAKVDLLRA ECCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC DPVPIVSFTFGLPASDVIRALQKAGTTVVQTVTSPQEAEAAAAAGVDMLAVQASVAGGHS CCCCEEEEECCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCHHEEEEHHHCCCCC GTFTPDRMDAPVVLTELVRAVVTRVGLPVIAAGGLATPADVTAVLHAGAAAAAVGTVLLR CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHCCHHHHHHHHHEEE ADESGASATHRAALADPTRTETVITRAFTGRPARGLRNRFIDRFEADAPLGYPAVHHLTS ECCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH PLRKAAAAGGDADLVHLWAGTGYRHAAEKPTATILTELAS HHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA