| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is cutM [H]
Identifier: 108797469
GI number: 108797469
Start: 544851
End: 545726
Strand: Direct
Name: cutM [H]
Synonym: Mmcs_0489
Alternate gene names: 108797469
Gene position: 544851-545726 (Clockwise)
Preceding gene: 108797468
Following gene: 108797470
Centisome position: 9.55
GC content: 70.09
Gene sequence:
>876_bases ATGCAGGTCCCCGGTCCCTTCGAATACGAACGAGCCACCAGCGTCGACCATGCGATCGGCCTGCTGGACCGGCTCGGTGA CGGCGCCATGATCGTGGCGGGCGGGCACAGCCTGTTGCCGATGATGAAGTTGCGGATCGCGAATCCGGAGTACCTGGTCG ACATCAACGACCTGACCCGCGAACTGGGCTACATCACCGTCGACGCCAGGGCCGTGCGCATCGGTGCCATGACCCGGCAT CGGCAGGTCCTGGAGTCGGCCGAGTTGGCCGAGGTGTGCCCGATCTTCGCCGACGCCGAACGGATGATCGCCGATCCGGT GGTCCGCAACCGCGGCACGCTGGGCGGGTCGCTGTGCCAGGCCGACCCGGCGGAGGACCTCACCACCGTGTGCCAGACCC TCGGGGCGGTCTGTGTGGCCCGCGGCCCGTCCGGGCAGCGCGAGATACCGATCGACGAGTTCCTCGAAGGGCCGTACGAA ACGTCGTTGTCGCACAACGAGATTCTGCTCGAGGTGCGCATCCCGGTGCGGCCCAACACCTCGAGCGCCTACACGAAAGT CGAACGCCGGGTGGGGGATTGGGCGGTCACCGCCGCGGGCGCCATGGTCACCCTCGAGGGCGACACCATCACCGCCGCCC GAATCGGCCTCACCGCCGTGAACCCCGATGCCGCCGCACTGGCCGCCGTCGGCGCGGCACTGGTCGGGCGGACCGCCGAC GAGGACGCCTTCGCCGAGGCGGGCCGGCAGGCCGCCGACGCGTGCGCACCCGACTCCGACATGCGGGGCAGCGCCGACTA CAAGCGGCATCTCGCGTCCGAACTGACCGTCCGCAACCTACGCACCGCCGTGCGGCGCGTCCGAGAAAGGGCCTGA
Upstream 100 bases:
>100_bases GGGCAAAGACAGTGAGTTCAGTGATCGCTTAACTCGCTATTGACGCCCGCGTCGGGCGGGCCGAGACTGAAGCCCTCCCG ATGAGTGTGAGGGCGGTCAC
Downstream 100 bases:
>100_bases GTATGCAGGTGAGCATGACCGTCAACGGCGAGCAGGTGAGCGCCGATGTCGAACCGCGGATGCTGCTGGTGCACTTCCTG CGAGACGAGTTGCGGCTCAC
Product: carbon monoxide dehydrogenase, medium subunit
Products: NA
Alternate protein names: CO dehydrogenase subunit M; CO-DH M [H]
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MQVPGPFEYERATSVDHAIGLLDRLGDGAMIVAGGHSLLPMMKLRIANPEYLVDINDLTRELGYITVDARAVRIGAMTRH RQVLESAELAEVCPIFADAERMIADPVVRNRGTLGGSLCQADPAEDLTTVCQTLGAVCVARGPSGQREIPIDEFLEGPYE TSLSHNEILLEVRIPVRPNTSSAYTKVERRVGDWAVTAAGAMVTLEGDTITAARIGLTAVNPDAAALAAVGAALVGRTAD EDAFAEAGRQAADACAPDSDMRGSADYKRHLASELTVRNLRTAVRRVRERA
Sequences:
>Translated_291_residues MQVPGPFEYERATSVDHAIGLLDRLGDGAMIVAGGHSLLPMMKLRIANPEYLVDINDLTRELGYITVDARAVRIGAMTRH RQVLESAELAEVCPIFADAERMIADPVVRNRGTLGGSLCQADPAEDLTTVCQTLGAVCVARGPSGQREIPIDEFLEGPYE TSLSHNEILLEVRIPVRPNTSSAYTKVERRVGDWAVTAAGAMVTLEGDTITAARIGLTAVNPDAAALAAVGAALVGRTAD EDAFAEAGRQAADACAPDSDMRGSADYKRHLASELTVRNLRTAVRRVRERA >Mature_291_residues MQVPGPFEYERATSVDHAIGLLDRLGDGAMIVAGGHSLLPMMKLRIANPEYLVDINDLTRELGYITVDARAVRIGAMTRH RQVLESAELAEVCPIFADAERMIADPVVRNRGTLGGSLCQADPAEDLTTVCQTLGAVCVARGPSGQREIPIDEFLEGPYE TSLSHNEILLEVRIPVRPNTSSAYTKVERRVGDWAVTAAGAMVTLEGDTITAARIGLTAVNPDAAALAAVGAALVGRTAD EDAFAEAGRQAADACAPDSDMRGSADYKRHLASELTVRNLRTAVRRVRERA
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1319
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Escherichia coli, GI1789231, Length=284, Percent_Identity=27.4647887323944, Blast_Score=89, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005107 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR002346 [H]
Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 31132; Mature: 31132
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVPGPFEYERATSVDHAIGLLDRLGDGAMIVAGGHSLLPMMKLRIANPEYLVDINDLTR CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHEECCCCEEEEHHHHHH ELGYITVDARAVRIGAMTRHRQVLESAELAEVCPIFADAERMIADPVVRNRGTLGGSLCQ HHCEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC ADPAEDLTTVCQTLGAVCVARGPSGQREIPIDEFLEGPYETSLSHNEILLEVRIPVRPNT CCCHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEEECCCCCC SSAYTKVERRVGDWAVTAAGAMVTLEGDTITAARIGLTAVNPDAAALAAVGAALVGRTAD CHHHHHHHHHHCCEEEEECCEEEEEECCEEEEHEEEEEEECCCHHHHHHHHHHHHCCCCC EDAFAEAGRQAADACAPDSDMRGSADYKRHLASELTVRNLRTAVRRVRERA HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQVPGPFEYERATSVDHAIGLLDRLGDGAMIVAGGHSLLPMMKLRIANPEYLVDINDLTR CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHEECCCCEEEEHHHHHH ELGYITVDARAVRIGAMTRHRQVLESAELAEVCPIFADAERMIADPVVRNRGTLGGSLCQ HHCEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC ADPAEDLTTVCQTLGAVCVARGPSGQREIPIDEFLEGPYETSLSHNEILLEVRIPVRPNT CCCHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEEECCCCCC SSAYTKVERRVGDWAVTAAGAMVTLEGDTITAARIGLTAVNPDAAALAAVGAALVGRTAD CHHHHHHHHHHCCEEEEECCEEEEEECCEEEEHEEEEEEECCCHHHHHHHHHHHHCCCCC EDAFAEAGRQAADACAPDSDMRGSADYKRHLASELTVRNLRTAVRRVRERA HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]