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The map label for this gene is ygiP [C]

Identifier: 108797467

GI number: 108797467

Start: 542641

End: 543546

Strand: Reverse

Name: ygiP [C]

Synonym: Mmcs_0487

Alternate gene names: 108797467

Gene position: 543546-542641 (Counterclockwise)

Preceding gene: 108797479

Following gene: 108797464

Centisome position: 9.53

GC content: 69.43

Gene sequence:

>906_bases
GTGCGTGCGGCCGCCGAGGAACTCGGCATGTCGGACGCGGGAATCTCCATGCACGTCACACAGCTGCGCAAGGAACTCGA
CGATCCGCTGTTCAGCCGCACGTCGGCCGGGCTGGCGTTCACTCCTGGAGGCCTTCGGCTCGCCAGTCGGGCCATCGAGA
TCCTGGGGCTGCAGCAGCAGACCGCCATCGAGGTGACCGAAGCGGCCCACGGCAGGCGGTTGCTGCGCATCGCCGCGTCG
ACGATGTTCGCCGAACACGCCGCGCCCGGCCTGATCGAGTTGTTCTCCGCGCGCGCCGACGATCTCACGGTGGAACTGTC
TGTGCACCCCACGAGCCGGTTCCGCGACCTGATCGAGTCACGCGCCGTCGACATCACGCTGGGCCCCGCACCCGCTGACC
CCGGCCCCGCCCTCGTGGTACGCCCCTTTCTCAAGTACCAGATCATCACCGTCGCCGCCCCCGAGACCGCCGCGGGCCCG
GGCATGCAGGCACCCGCGCAGCTGCGCGAGCACGACTGGATGCTGGGGCCGTCGGCCGGCGGCGTCGACGGTGAGGTCGC
CACGATGCTGCGGAACCTGTCGATCCCGGAGTCGCGGCAGCGCATCTTCCAGAGCGAGGCGGCCGCACTCGAGGAGGTGC
AGCGCGCCGGCGGCGTGACGCTGACCCTCGGCTTCGCGGTGTCGAGAGATCTTTCGTCGCGCCGGCTGGTGCAGATCAAA
GGAGCGGGCCTGCAGACGTCCGGGGAGTGGTTCGCTTCGACGCTCACGCCGGCGGCGCGCCCACCGGCATCATCGGAACT
GATGCGTTTCATCACCACTCCCCGCTGCACACAGGCGATGATCCGCGGCACCGGTGTCGGCGTCACCCGCTTCAAGCCGA
AGGTGCATGTGACGCTCTGGAGTTGA

Upstream 100 bases:

>100_bases
AGCACGTCTCTCACGTCGCCCAATGTATGCCGACCGTAGGCTGCACACCGTGACACCCGCTCAGCTCCGTGCCTATTCGG
CGGTGGTGCGACTGGGTTCC

Downstream 100 bases:

>100_bases
GGCGGCTAACGCCCCGCCTCCAGCGCACGGATCAGGCTGGCCGCATCCCACGGCCCCTTGTGTCGCTTGCCGTTGACGAA
GAACGTAGGTGTGGAGTTGA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MRAAAEELGMSDAGISMHVTQLRKELDDPLFSRTSAGLAFTPGGLRLASRAIEILGLQQQTAIEVTEAAHGRRLLRIAAS
TMFAEHAAPGLIELFSARADDLTVELSVHPTSRFRDLIESRAVDITLGPAPADPGPALVVRPFLKYQIITVAAPETAAGP
GMQAPAQLREHDWMLGPSAGGVDGEVATMLRNLSIPESRQRIFQSEAAALEEVQRAGGVTLTLGFAVSRDLSSRRLVQIK
GAGLQTSGEWFASTLTPAARPPASSELMRFITTPRCTQAMIRGTGVGVTRFKPKVHVTLWS

Sequences:

>Translated_301_residues
MRAAAEELGMSDAGISMHVTQLRKELDDPLFSRTSAGLAFTPGGLRLASRAIEILGLQQQTAIEVTEAAHGRRLLRIAAS
TMFAEHAAPGLIELFSARADDLTVELSVHPTSRFRDLIESRAVDITLGPAPADPGPALVVRPFLKYQIITVAAPETAAGP
GMQAPAQLREHDWMLGPSAGGVDGEVATMLRNLSIPESRQRIFQSEAAALEEVQRAGGVTLTLGFAVSRDLSSRRLVQIK
GAGLQTSGEWFASTLTPAARPPASSELMRFITTPRCTQAMIRGTGVGVTRFKPKVHVTLWS
>Mature_301_residues
MRAAAEELGMSDAGISMHVTQLRKELDDPLFSRTSAGLAFTPGGLRLASRAIEILGLQQQTAIEVTEAAHGRRLLRIAAS
TMFAEHAAPGLIELFSARADDLTVELSVHPTSRFRDLIESRAVDITLGPAPADPGPALVVRPFLKYQIITVAAPETAAGP
GMQAPAQLREHDWMLGPSAGGVDGEVATMLRNLSIPESRQRIFQSEAAALEEVQRAGGVTLTLGFAVSRDLSSRRLVQIK
GAGLQTSGEWFASTLTPAARPPASSELMRFITTPRCTQAMIRGTGVGVTRFKPKVHVTLWS

Specific function: Unknown

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32196; Mature: 32196

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAAAEELGMSDAGISMHVTQLRKELDDPLFSRTSAGLAFTPGGLRLASRAIEILGLQQQ
CCCCHHHCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCEEECCCHHHHHHHHHHHHCCCHH
TAIEVTEAAHGRRLLRIAASTMFAEHAAPGLIELFSARADDLTVELSVHPTSRFRDLIES
HHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECCHHHHHHHHHH
RAVDITLGPAPADPGPALVVRPFLKYQIITVAAPETAAGPGMQAPAQLREHDWMLGPSAG
CCEEEEECCCCCCCCCCEEEECCCEEEEEEEECCCCCCCCCCCCCHHHHHCCEEECCCCC
GVDGEVATMLRNLSIPESRQRIFQSEAAALEEVQRAGGVTLTLGFAVSRDLSSRRLVQIK
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCEEEEEE
GAGLQTSGEWFASTLTPAARPPASSELMRFITTPRCTQAMIRGTGVGVTRFKPKVHVTLW
CCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCEEEECCEEEEEEE
S
C
>Mature Secondary Structure
MRAAAEELGMSDAGISMHVTQLRKELDDPLFSRTSAGLAFTPGGLRLASRAIEILGLQQQ
CCCCHHHCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCEEECCCHHHHHHHHHHHHCCCHH
TAIEVTEAAHGRRLLRIAASTMFAEHAAPGLIELFSARADDLTVELSVHPTSRFRDLIES
HHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECCHHHHHHHHHH
RAVDITLGPAPADPGPALVVRPFLKYQIITVAAPETAAGPGMQAPAQLREHDWMLGPSAG
CCEEEEECCCCCCCCCCEEEECCCEEEEEEEECCCCCCCCCCCCCHHHHHCCEEECCCCC
GVDGEVATMLRNLSIPESRQRIFQSEAAALEEVQRAGGVTLTLGFAVSRDLSSRRLVQIK
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCEEEEEE
GAGLQTSGEWFASTLTPAARPPASSELMRFITTPRCTQAMIRGTGVGVTRFKPKVHVTLW
CCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCEEEECCEEEEEEE
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]