| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797456
Identifier: 108797456
GI number: 108797456
Start: 530147
End: 530677
Strand: Direct
Name: 108797456
Synonym: Mmcs_0476
Alternate gene names: NA
Gene position: 530147-530677 (Clockwise)
Preceding gene: 108797452
Following gene: 108797458
Centisome position: 9.29
GC content: 65.16
Gene sequence:
>531_bases GTGGTCGTATCGACTTCGCTGCCGAACGAACCCTCCGGGACTCTGCATTTCCAGATGTCGGAGCCCGGCGGTACGCCGAT GCTGTCCATCACCCGCTTCGCGGAGCGGCAACACCGACTCGAAATCCGCGATTCAGCGGGCGGCGTCATCGGCCAGATCC GTCAGACGAGCACCCGGGGGCAGGCGTTTCGGAAAGCTCGCATGGCGGTCGTGCTCGAATCTCGCCGGCAGCCACTCGCC TGTGCCGATCTGACCATCGACCCTTCGCAGAACCGGTATGCCAACCTCGAGACACCGATCCGCGGCGCCGCCGGTGCGGT GATCGCCACGATCGAACGACAGGGCGGGTACACGGGCCGAGGGGACGACCCTCTCGTCTACGAGTTGCGATGTGCGCAGC CGACCGGTGAGCCGCTGCCGATGCTGCTGCTGGTCACTGCTTTCATGCATTCGCTCTACGACGGCGTGGTCGATCGTGGG CCCTTTGGTGCAGTCGGGCGTTGGTTGTCTCGTCCAACGTGGGAGTCGTGA
Upstream 100 bases:
>100_bases CCCGCTCGGCCGTCCCAGGCTTTACGTGTGCCGGTTGTCTGACCATCGTGACCAGGACGTGCAGTGGTCGGTCGATGATG AGTTCGGCAGACAGGTCGCG
Downstream 100 bases:
>100_bases GCGGCACCGCCCCGGGGTGGTTCACAGACCCCTGGGATCCTCGTCAGACGAGGTACTTCGACGGTGACCGATGGACTGGC AGCATTGCGCCGCATCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MVVSTSLPNEPSGTLHFQMSEPGGTPMLSITRFAERQHRLEIRDSAGGVIGQIRQTSTRGQAFRKARMAVVLESRRQPLA CADLTIDPSQNRYANLETPIRGAAGAVIATIERQGGYTGRGDDPLVYELRCAQPTGEPLPMLLLVTAFMHSLYDGVVDRG PFGAVGRWLSRPTWES
Sequences:
>Translated_176_residues MVVSTSLPNEPSGTLHFQMSEPGGTPMLSITRFAERQHRLEIRDSAGGVIGQIRQTSTRGQAFRKARMAVVLESRRQPLA CADLTIDPSQNRYANLETPIRGAAGAVIATIERQGGYTGRGDDPLVYELRCAQPTGEPLPMLLLVTAFMHSLYDGVVDRG PFGAVGRWLSRPTWES >Mature_176_residues MVVSTSLPNEPSGTLHFQMSEPGGTPMLSITRFAERQHRLEIRDSAGGVIGQIRQTSTRGQAFRKARMAVVLESRRQPLA CADLTIDPSQNRYANLETPIRGAAGAVIATIERQGGYTGRGDDPLVYELRCAQPTGEPLPMLLLVTAFMHSLYDGVVDRG PFGAVGRWLSRPTWES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19237; Mature: 19237
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVSTSLPNEPSGTLHFQMSEPGGTPMLSITRFAERQHRLEIRDSAGGVIGQIRQTSTRG CEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCEEECCCCCCHHHHHHHCCHHH QAFRKARMAVVLESRRQPLACADLTIDPSQNRYANLETPIRGAAGAVIATIERQGGYTGR HHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCEEEEEEECCCCCCCC GDDPLVYELRCAQPTGEPLPMLLLVTAFMHSLYDGVVDRGPFGAVGRWLSRPTWES CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCC >Mature Secondary Structure MVVSTSLPNEPSGTLHFQMSEPGGTPMLSITRFAERQHRLEIRDSAGGVIGQIRQTSTRG CEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCEEECCCCCCHHHHHHHCCHHH QAFRKARMAVVLESRRQPLACADLTIDPSQNRYANLETPIRGAAGAVIATIERQGGYTGR HHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCEEEEEEECCCCCCCC GDDPLVYELRCAQPTGEPLPMLLLVTAFMHSLYDGVVDRGPFGAVGRWLSRPTWES CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA