| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is camA [H]
Identifier: 108797435
GI number: 108797435
Start: 509557
End: 510759
Strand: Direct
Name: camA [H]
Synonym: Mmcs_0455
Alternate gene names: 108797435
Gene position: 509557-510759 (Clockwise)
Preceding gene: 108797434
Following gene: 108797437
Centisome position: 8.93
GC content: 71.16
Gene sequence:
>1203_bases ATGCCGGTGGACCGTCAACTCGAGAAGATCCTCGTCGTCGGCACCGGTGTGGCCGGGATGCGCGCGGCGGAGACCCTGCG CCTGGACGGCTACCGCGGTGAGCTGACCGTCGTCGGCGCCGAACGTCACGCCCCGTACCAGCGGCCGCCGCTGTCGAAGA AGCTGCTGAGCGGCGCGGTGCACCGGGCCGGGGCCGACCTCGCGCCGCGGATGGACCTCGAAGCGCGGGTGCTGCGAGGA GCCTCGGTGCGCGAGCTCGACATGTCCACGCGCACGGCACACCTGCGCGACGGGTCCGACGACGTCTCGGTGCCCTTCGA CGGACTGGTCGTCGCAACCGGCGCGGCCGCACGGCAGTGGCCGGACGGTCCGGTGCCCGACGGGGTCATGGCGCTTCGCA CCGTCGACGACTGCCTGGCCATCCGGGAGCGGCTCGAATCGCGTCCGCGGGTGGTCGTGGTCGGCGGCGGGTTCATCGGC GCGGAGGTGGCGGCGACGTGCCGGTCTATGGGTCTTTCGGTGACACTGATCGAAAAGAGCAGTGCGCCAATGGCTTCAGC GCTCGGCGAGGAGATGGCCGCGTGCTGGGAACGACTGCACCGCGGCAACGGCGTCGAGTTGCGTTCCGGGGTGGGTGTGG AGTCGTTCGCCGGCGACGACCGGGTCGAGGCGGTGCACCTGACCGACGGCACCCGACTGCCCGCCGACCTGGTGATCATC GGACTGGGCGTCACCCCGTCTGTCGACTGGCTCAGCGGGTCGGATCTGCGCCTCGACAACGGCGTGGTGTGCGACGCCAC GGGTGCGGTGGAAGGTGTGACCGATGTGGTGGCCGCCGGTGACGTCGCGTCCTGGTGGCACCCGCGCTACGAACGGTATC TGCGCATCGAGCACTGGGAGCACGCCGAACGTCAGGGGGTCGCGGCCGCGCACACCCTGCTCGCCGGGCCCGAGCGGGCG CAGGAGTTCGACGCCCTGCCGTACTTCTGGACGGATCAGTACGACGTCAAGATGCAGATGCTCGGTGTGCCTGACGGTTA CGACAGTGTCGCCGTCGTCGAGGGTGGCCCCGACCGGTGGGACTTCGTCGCCGCCTACGGTCGCGACGGTCGCGTCATCG CGGTGCTCAGCACCATCCCCGGCCGGGTCCACGCCTATCGCGACGCAGTCTTCGGCGCCTTCCCGCCGGCCCCGCCCGGG TAG
Upstream 100 bases:
>100_bases GCACCTGCTGCAGGAGAACCCGAGCGAGGAACTCCGAGAGCAGGTGATCGGCGCCGAACGGTCCTGTCCCACCCAGGCGA TCACCGTCGAGGGATGAGCC
Downstream 100 bases:
>100_bases TCGAGAAGGTCAACTCTCCTGCCGCTCACGGCGACGCGACCCGACACCCAGGACTCCGACCGCCGCGACCACGGCAGCTC CGGCGACGGCCAGGCTGACC
Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: Oxidized Ferredoxin; NADH; cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol; NAD [C]
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MPVDRQLEKILVVGTGVAGMRAAETLRLDGYRGELTVVGAERHAPYQRPPLSKKLLSGAVHRAGADLAPRMDLEARVLRG ASVRELDMSTRTAHLRDGSDDVSVPFDGLVVATGAAARQWPDGPVPDGVMALRTVDDCLAIRERLESRPRVVVVGGGFIG AEVAATCRSMGLSVTLIEKSSAPMASALGEEMAACWERLHRGNGVELRSGVGVESFAGDDRVEAVHLTDGTRLPADLVII GLGVTPSVDWLSGSDLRLDNGVVCDATGAVEGVTDVVAAGDVASWWHPRYERYLRIEHWEHAERQGVAAAHTLLAGPERA QEFDALPYFWTDQYDVKMQMLGVPDGYDSVAVVEGGPDRWDFVAAYGRDGRVIAVLSTIPGRVHAYRDAVFGAFPPAPPG
Sequences:
>Translated_400_residues MPVDRQLEKILVVGTGVAGMRAAETLRLDGYRGELTVVGAERHAPYQRPPLSKKLLSGAVHRAGADLAPRMDLEARVLRG ASVRELDMSTRTAHLRDGSDDVSVPFDGLVVATGAAARQWPDGPVPDGVMALRTVDDCLAIRERLESRPRVVVVGGGFIG AEVAATCRSMGLSVTLIEKSSAPMASALGEEMAACWERLHRGNGVELRSGVGVESFAGDDRVEAVHLTDGTRLPADLVII GLGVTPSVDWLSGSDLRLDNGVVCDATGAVEGVTDVVAAGDVASWWHPRYERYLRIEHWEHAERQGVAAAHTLLAGPERA QEFDALPYFWTDQYDVKMQMLGVPDGYDSVAVVEGGPDRWDFVAAYGRDGRVIAVLSTIPGRVHAYRDAVFGAFPPAPPG >Mature_399_residues PVDRQLEKILVVGTGVAGMRAAETLRLDGYRGELTVVGAERHAPYQRPPLSKKLLSGAVHRAGADLAPRMDLEARVLRGA SVRELDMSTRTAHLRDGSDDVSVPFDGLVVATGAAARQWPDGPVPDGVMALRTVDDCLAIRERLESRPRVVVVGGGFIGA EVAATCRSMGLSVTLIEKSSAPMASALGEEMAACWERLHRGNGVELRSGVGVESFAGDDRVEAVHLTDGTRLPADLVIIG LGVTPSVDWLSGSDLRLDNGVVCDATGAVEGVTDVVAAGDVASWWHPRYERYLRIEHWEHAERQGVAAAHTLLAGPERAQ EFDALPYFWTDQYDVKMQMLGVPDGYDSVAVVEGGPDRWDFVAAYGRDGRVIAVLSTIPGRVHAYRDAVFGAFPPAPPG
Specific function: The oxidation of camphor by cytochrome P450-CAM requires the participation of a flavoprotein, putidaredoxin reductase, and an iron-sulfur protein, putidaredoxin, to mediate the transfer of electrons from NADH to P450 for oxygen activation [H]
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI21389617, Length=378, Percent_Identity=30.952380952381, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI226437568, Length=378, Percent_Identity=30.952380952381, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI65787454, Length=378, Percent_Identity=30.952380952381, Blast_Score=156, Evalue=4e-38, Organism=Homo sapiens, GI4757732, Length=373, Percent_Identity=22.2520107238606, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI22202629, Length=373, Percent_Identity=22.2520107238606, Blast_Score=76, Evalue=6e-14, Organism=Escherichia coli, GI1788892, Length=380, Percent_Identity=30.7894736842105, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI1789065, Length=280, Percent_Identity=25.7142857142857, Blast_Score=74, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17559934, Length=390, Percent_Identity=27.6923076923077, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI24585130, Length=377, Percent_Identity=29.4429708222812, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI24639257, Length=374, Percent_Identity=27.807486631016, Blast_Score=135, Evalue=5e-32, Organism=Drosophila melanogaster, GI281359715, Length=374, Percent_Identity=27.807486631016, Blast_Score=134, Evalue=9e-32, Organism=Drosophila melanogaster, GI281359713, Length=374, Percent_Identity=27.807486631016, Blast_Score=134, Evalue=9e-32, Organism=Drosophila melanogaster, GI24639250, Length=374, Percent_Identity=27.807486631016, Blast_Score=134, Evalue=9e-32, Organism=Drosophila melanogaster, GI18543267, Length=374, Percent_Identity=27.807486631016, Blast_Score=134, Evalue=9e-32, Organism=Drosophila melanogaster, GI24639252, Length=374, Percent_Identity=27.807486631016, Blast_Score=134, Evalue=9e-32, Organism=Drosophila melanogaster, GI28573993, Length=391, Percent_Identity=24.2966751918159, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24581020, Length=391, Percent_Identity=24.2966751918159, Blast_Score=103, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR004099 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: 1.18.1.3 [C]
Molecular weight: Translated: 42845; Mature: 42714
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVDRQLEKILVVGTGVAGMRAAETLRLDGYRGELTVVGAERHAPYQRPPLSKKLLSGAV CCCCCCEEEEEEEECCCCCCHHHHEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHH HRAGADLAPRMDLEARVLRGASVRELDMSTRTAHLRDGSDDVSVPFDGLVVATGAAARQW HHCCCCCCCCCCHHHHHHCCCCEEEECCCCCEEECCCCCCCCCCCCCCEEEECCCHHCCC PDGPVPDGVMALRTVDDCLAIRERLESRPRVVVVGGGFIGAEVAATCRSMGLSVTLIEKS CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEEECC SAPMASALGEEMAACWERLHRGNGVELRSGVGVESFAGDDRVEAVHLTDGTRLPADLVII CCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHCCCCCCEEEEEECCCCCCCCEEEEE GLGVTPSVDWLSGSDLRLDNGVVCDATGAVEGVTDVVAAGDVASWWHPRYERYLRIEHWE EECCCCCCCCCCCCCEEECCCEEEECCCCHHHHHHHHHCCCHHHHHCHHHHHEEEEHHHH HAERQGVAAAHTLLAGPERAQEFDALPYFWTDQYDVKMQMLGVPDGYDSVAVVEGGPDRW HHHHCCHHHHHHHHCCCHHHHHHCCCCEEECCCCEEEEEEEECCCCCCCEEEEECCCCCE DFVAAYGRDGRVIAVLSTIPGRVHAYRDAVFGAFPPAPPG EEEEEECCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PVDRQLEKILVVGTGVAGMRAAETLRLDGYRGELTVVGAERHAPYQRPPLSKKLLSGAV CCCCCEEEEEEEECCCCCCHHHHEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHH HRAGADLAPRMDLEARVLRGASVRELDMSTRTAHLRDGSDDVSVPFDGLVVATGAAARQW HHCCCCCCCCCCHHHHHHCCCCEEEECCCCCEEECCCCCCCCCCCCCCEEEECCCHHCCC PDGPVPDGVMALRTVDDCLAIRERLESRPRVVVVGGGFIGAEVAATCRSMGLSVTLIEKS CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEEECC SAPMASALGEEMAACWERLHRGNGVELRSGVGVESFAGDDRVEAVHLTDGTRLPADLVII CCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHCCCCCCEEEEEECCCCCCCCEEEEE GLGVTPSVDWLSGSDLRLDNGVVCDATGAVEGVTDVVAAGDVASWWHPRYERYLRIEHWE EECCCCCCCCCCCCCEEECCCEEEECCCCHHHHHHHHHCCCHHHHHCHHHHHEEEEHHHH HAERQGVAAAHTLLAGPERAQEFDALPYFWTDQYDVKMQMLGVPDGYDSVAVVEGGPDRW HHHHCCHHHHHHHHCCCHHHHHHCCCCEEECCCCEEEEEEEECCCCCCCEEEEECCCCCE DFVAAYGRDGRVIAVLSTIPGRVHAYRDAVFGAFPPAPPG EEEEEECCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FAD. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Reduced Ferredoxin; NAD(+); 3-phenylpropionate; NADH; Proton; O2 [C]
Specific reaction: Reduced Ferredoxin + NAD(+) = Oxidized Ferredoxin + NADH. 3-phenylpropionate + NADH + Proton + O2 = cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol + NAD [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2180940; 2613690; 3003058; 12011076; 11524002 [H]