Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797423
Identifier: 108797423
GI number: 108797423
Start: 493536
End: 496073
Strand: Reverse
Name: 108797423
Synonym: Mmcs_0443
Alternate gene names: NA
Gene position: 496073-493536 (Counterclockwise)
Preceding gene: 108797424
Following gene: 108797422
Centisome position: 8.69
GC content: 74.19
Gene sequence:
>2538_bases ATGGCAAGCCCGGCGCCGCACCGTCCGGCGGAGCTTCCGGCCGCGGCGCGCGAGGCCGTCACGGCGATCGAAGCGGACCC CGCGGCGCCGGCGAAGGTTCTGGTCACCGGGGGGATCGGGACCGGTAAGTCGACCGTGCTGGCGGCGGTGCGTGCGGCCC TGCGGTCGGCGGGCCGTCCGGTGCTGTCCCGGCCGCGGCGCCCCGACGACCCCGCCGAGGCCGCGGTGGTCGTCGACGAT GCGCACCTGCTCGACCCCGGCGACCTCGATCGGCTCACCGATCTGGTGGCCGATTCGGGATCGACGGTGGTGATCGCCAC CCAGCCGCTCGCACACAATGCGCCGCTGCGCGCACTGGTCACCGCGCTCGAACGCGAAAACCCCGCCGTCGCACTGGGTT CGGTCACCGCGGTGGAGGTGGGCCGGGCGGCGGCCGCGACGCTCGGTGCCGCCCCGGCACCCGAGGTCGTCCGGCTACTG ACCGCCGTCACCGCCGGTCTGCCGTTCCTGCTGCGGCCCGCGCTCGCCGCGGTCGGCGACGGGGCCGCGGCGGTCCGGCA GGCGGCGCGCATCGCGCTGATCGAACGGCTGCGCCGCCTCGACGAACCGCTGCTCGACACGCTGCTGGTGGCGTCGCTGA GCCCCGAACTGGGACCCGACGACGTCGCTGCGGCCCTGCACATCCCGTCCGACGCCGCACTCGCCGTCGTCGACCGGGCC AGGGCGAGCGGACTTCTCGAACCGGCGTACCACCACAGCTTCCTGCGCACCGTGCACGAGGGCATCGCCCAGCTGGTGGG CGCCGCCCGCCACCACGACATCGAGGTGTCGCTGCTCTGTTCGCAACTCGAATTGTCAACGCTGACAGCAGATCTCGCGT TGAGAATGGCAGAACACGGACTGCGCGACGAACGACTCGGCACCGCGCTGGCCGATCTGGCCGCGCAGACCGCCAACGAC CCTGCCCGCTCGGCACGGCTGTACCGGGCGGCCGCCGACGCCGGCGCCACCGCACTCAGCGCGCAACTCGCCGACGCACT CGCGCTGACCGGGGACTGCGCGACGGCGGGCCGCATCGCCGATGAACTGCTCACCTCCCAGGACCCCGACGAACGGGCCG CCGCGGTGCGGATCTCGGCGAGCATCGCGATGCACGACGGCAGCGCCGCCCAGGCTTTCGACCTCTTCCGCTGGCTGGGG CCGTCCCCCGACGCGCTGCTGAGCGCCGCGGGCACCGTCGCCGCACTCGCCGCCGCTGACGGGGACACCGCCAGGGAGCT CGCGCGGACGCAGGCCACCGGACCCCCGACGTCGATCGCCCGCGCGGCGCGCAGCCTCGCCGACGGGCTCATGCTGTCCC TCGACCAGCCCTACCCCGTCGCGGCGGCGCGGCTGGGGCAGTCACTGAACGCCGATGCCGGCGTCGTCACCCCCGACACC CCGGCCGCACTGGTGACGCTGGCGGCGCTGCACGGCGGCGACCCGGTCCGCGCCCGCAGCGTGATGGGCCGGGCCGTTCG CAGCGGGCGCGACGACGGATCCGGCGATGCGATATTCGTCACGTACCGGCACCGCCTGCTGCTGGGCTGGACGCACATGC AGGACGGCCAGTTGCAGGCCGCGGCCACCGCGCTTCCGCGGCCCACCGCCGACCTGCACCGCCGCGATGCGCTGTGGGCG GCCGCGCTGCAGACCGCGATCGCGCGGCGCAGCGGGGACAGCGGCGCCATGCAGATGCACTGGTACTCCGCGATGGAGGT GCTGGCCGAATACTCGGTCGACCTGTTCGCGCTGCTCCCGCTCGGCGAGCTGTGGGTGGCCGCGGCCCGGCTACGGCAGG TCGAGCGGTTACAGCACACCCTCGACGAGGCCTTCGCGCTGCTCACGGCGCTGGGCGATCCGGTGCTGTGGTCGGTGCCG CTGCACTGGGCGGGTGTGCACGCAGGCATCCTGGCGAACTCTCCGGAAGCGGTCGCCCCGCACGGGCAGGCGCTGACCGC CGCCAGCCGCGACGGGCGCGCACAGAGCGCGTTCGCGAAAGCGCTGGCCTCGGCCGGTCGCACCTGGTTGCGGGTGCTCG CCAACCACGTCGATGTCGACGAGGTGTCCGCCGCCGCCCGCGGGCTGGCGCAGTTCGGCCACACCTGGGACGCGACGCGG CTGGCCGGTCAGGCCGCCCTGCAGACGCCGGACGGCCGGGTGTCGCAGGCGATGCTGCAGATCGCGCGCGACCTCAAACA GAGCGTCGCCGGCGCCGAGGTGCTGACCGAGACGACCGGTATGGATGCACCGACGCCCGCGGCGGCCACGCCGGCAGCGA CCCCGGCCCGGGCCGCCCCGGCGCAACTCTCGGAGCGGGAACGCGAGGTGGCAGAGCTGTTGCTGCTCGGTATGCCCTAC CGGGACATTGGCGCTCAACTGTTCATCTCAGCGAAGACCGTCGAACACCATGTGGCCCGGATCCGCCGCCGGCTCGGCGC GGAATCGCGGTCCGAGATGCTGTCGATGCTGCGCGCACTTCTCGCCCCCTCGGGCTGA
Upstream 100 bases:
>100_bases GCCGACCACCACGGCCGCACCGCCGCCGACGACGGTGGACCCGCCCGATCCGCCGGTCACGACCGTTCCCGTGCCCGACG ACGGCGCCTGATCGCACACG
Downstream 100 bases:
>100_bases CCACAGGGCGGGTTAGGGCAGCCTTCGTAGCGGCCCGCTTGGCAATGGTGACACTATGAGCAGGACCAAGCCTAAGTTAC CGACGGGTAACTTAGGCTAA
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulatory Protein; Transcriptional Regulator LuxR Family; Transcriptional Regulator; Response Regulator Receiver Protein; Regulatory Protein LuxR; Luxr Family Transcriptional Regulator
Number of amino acids: Translated: 845; Mature: 844
Protein sequence:
>845_residues MASPAPHRPAELPAAAREAVTAIEADPAAPAKVLVTGGIGTGKSTVLAAVRAALRSAGRPVLSRPRRPDDPAEAAVVVDD AHLLDPGDLDRLTDLVADSGSTVVIATQPLAHNAPLRALVTALERENPAVALGSVTAVEVGRAAAATLGAAPAPEVVRLL TAVTAGLPFLLRPALAAVGDGAAAVRQAARIALIERLRRLDEPLLDTLLVASLSPELGPDDVAAALHIPSDAALAVVDRA RASGLLEPAYHHSFLRTVHEGIAQLVGAARHHDIEVSLLCSQLELSTLTADLALRMAEHGLRDERLGTALADLAAQTAND PARSARLYRAAADAGATALSAQLADALALTGDCATAGRIADELLTSQDPDERAAAVRISASIAMHDGSAAQAFDLFRWLG PSPDALLSAAGTVAALAAADGDTARELARTQATGPPTSIARAARSLADGLMLSLDQPYPVAAARLGQSLNADAGVVTPDT PAALVTLAALHGGDPVRARSVMGRAVRSGRDDGSGDAIFVTYRHRLLLGWTHMQDGQLQAAATALPRPTADLHRRDALWA AALQTAIARRSGDSGAMQMHWYSAMEVLAEYSVDLFALLPLGELWVAAARLRQVERLQHTLDEAFALLTALGDPVLWSVP LHWAGVHAGILANSPEAVAPHGQALTAASRDGRAQSAFAKALASAGRTWLRVLANHVDVDEVSAAARGLAQFGHTWDATR LAGQAALQTPDGRVSQAMLQIARDLKQSVAGAEVLTETTGMDAPTPAAATPAATPARAAPAQLSEREREVAELLLLGMPY RDIGAQLFISAKTVEHHVARIRRRLGAESRSEMLSMLRALLAPSG
Sequences:
>Translated_845_residues MASPAPHRPAELPAAAREAVTAIEADPAAPAKVLVTGGIGTGKSTVLAAVRAALRSAGRPVLSRPRRPDDPAEAAVVVDD AHLLDPGDLDRLTDLVADSGSTVVIATQPLAHNAPLRALVTALERENPAVALGSVTAVEVGRAAAATLGAAPAPEVVRLL TAVTAGLPFLLRPALAAVGDGAAAVRQAARIALIERLRRLDEPLLDTLLVASLSPELGPDDVAAALHIPSDAALAVVDRA RASGLLEPAYHHSFLRTVHEGIAQLVGAARHHDIEVSLLCSQLELSTLTADLALRMAEHGLRDERLGTALADLAAQTAND PARSARLYRAAADAGATALSAQLADALALTGDCATAGRIADELLTSQDPDERAAAVRISASIAMHDGSAAQAFDLFRWLG PSPDALLSAAGTVAALAAADGDTARELARTQATGPPTSIARAARSLADGLMLSLDQPYPVAAARLGQSLNADAGVVTPDT PAALVTLAALHGGDPVRARSVMGRAVRSGRDDGSGDAIFVTYRHRLLLGWTHMQDGQLQAAATALPRPTADLHRRDALWA AALQTAIARRSGDSGAMQMHWYSAMEVLAEYSVDLFALLPLGELWVAAARLRQVERLQHTLDEAFALLTALGDPVLWSVP LHWAGVHAGILANSPEAVAPHGQALTAASRDGRAQSAFAKALASAGRTWLRVLANHVDVDEVSAAARGLAQFGHTWDATR LAGQAALQTPDGRVSQAMLQIARDLKQSVAGAEVLTETTGMDAPTPAAATPAATPARAAPAQLSEREREVAELLLLGMPY RDIGAQLFISAKTVEHHVARIRRRLGAESRSEMLSMLRALLAPSG >Mature_844_residues ASPAPHRPAELPAAAREAVTAIEADPAAPAKVLVTGGIGTGKSTVLAAVRAALRSAGRPVLSRPRRPDDPAEAAVVVDDA HLLDPGDLDRLTDLVADSGSTVVIATQPLAHNAPLRALVTALERENPAVALGSVTAVEVGRAAAATLGAAPAPEVVRLLT AVTAGLPFLLRPALAAVGDGAAAVRQAARIALIERLRRLDEPLLDTLLVASLSPELGPDDVAAALHIPSDAALAVVDRAR ASGLLEPAYHHSFLRTVHEGIAQLVGAARHHDIEVSLLCSQLELSTLTADLALRMAEHGLRDERLGTALADLAAQTANDP ARSARLYRAAADAGATALSAQLADALALTGDCATAGRIADELLTSQDPDERAAAVRISASIAMHDGSAAQAFDLFRWLGP SPDALLSAAGTVAALAAADGDTARELARTQATGPPTSIARAARSLADGLMLSLDQPYPVAAARLGQSLNADAGVVTPDTP AALVTLAALHGGDPVRARSVMGRAVRSGRDDGSGDAIFVTYRHRLLLGWTHMQDGQLQAAATALPRPTADLHRRDALWAA ALQTAIARRSGDSGAMQMHWYSAMEVLAEYSVDLFALLPLGELWVAAARLRQVERLQHTLDEAFALLTALGDPVLWSVPL HWAGVHAGILANSPEAVAPHGQALTAASRDGRAQSAFAKALASAGRTWLRVLANHVDVDEVSAAARGLAQFGHTWDATRL AGQAALQTPDGRVSQAMLQIARDLKQSVAGAEVLTETTGMDAPTPAAATPAATPARAAPAQLSEREREVAELLLLGMPYR DIGAQLFISAKTVEHHVARIRRRLGAESRSEMLSMLRALLAPSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87662; Mature: 87531
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2 ; PS00105 AA_TRANSFER_CLASS_1 ; PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPAPHRPAELPAAAREAVTAIEADPAAPAKVLVTGGIGTGKSTVLAAVRAALRSAGRP CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCC VLSRPRRPDDPAEAAVVVDDAHLLDPGDLDRLTDLVADSGSTVVIATQPLAHNAPLRALV HHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHH TALERENPAVALGSVTAVEVGRAAAATLGAAPAPEVVRLLTAVTAGLPFLLRPALAAVGD HHHHCCCCCEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC GAAAVRQAARIALIERLRRLDEPLLDTLLVASLSPELGPDDVAAALHIPSDAALAVVDRA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEECCCCHHHHHHHHH RASGLLEPAYHHSFLRTVHEGIAQLVGAARHHDIEVSLLCSQLELSTLTADLALRMAEHG HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC LRDERLGTALADLAAQTANDPARSARLYRAAADAGATALSAQLADALALTGDCATAGRIA CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHH DELLTSQDPDERAAAVRISASIAMHDGSAAQAFDLFRWLGPSPDALLSAAGTVAALAAAD HHHHCCCCCCHHHHEEEEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC GDTARELARTQATGPPTSIARAARSLADGLMLSLDQPYPVAAARLGQSLNADAGVVTPDT CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHCCCCCCCCCCCCCCC PAALVTLAALHGGDPVRARSVMGRAVRSGRDDGSGDAIFVTYRHRLLLGWTHMQDGQLQA HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECEEEEEEECCCCCCHHH AATALPRPTADLHRRDALWAAALQTAIARRSGDSGAMQMHWYSAMEVLAEYSVDLFALLP HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCHHHHHCC LGELWVAAARLRQVERLQHTLDEAFALLTALGDPVLWSVPLHWAGVHAGILANSPEAVAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCCCC HGQALTAASRDGRAQSAFAKALASAGRTWLRVLANHVDVDEVSAAARGLAQFGHTWDATR CCCEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHH LAGQAALQTPDGRVSQAMLQIARDLKQSVAGAEVLTETTGMDAPTPAAATPAATPARAAP HHCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC AQLSEREREVAELLLLGMPYRDIGAQLFISAKTVEHHVARIRRRLGAESRSEMLSMLRAL HHHHHHHHHHHHHHHHCCCCHHHCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LAPSG HCCCC >Mature Secondary Structure ASPAPHRPAELPAAAREAVTAIEADPAAPAKVLVTGGIGTGKSTVLAAVRAALRSAGRP CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCC VLSRPRRPDDPAEAAVVVDDAHLLDPGDLDRLTDLVADSGSTVVIATQPLAHNAPLRALV HHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHH TALERENPAVALGSVTAVEVGRAAAATLGAAPAPEVVRLLTAVTAGLPFLLRPALAAVGD HHHHCCCCCEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC GAAAVRQAARIALIERLRRLDEPLLDTLLVASLSPELGPDDVAAALHIPSDAALAVVDRA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEECCCCHHHHHHHHH RASGLLEPAYHHSFLRTVHEGIAQLVGAARHHDIEVSLLCSQLELSTLTADLALRMAEHG HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC LRDERLGTALADLAAQTANDPARSARLYRAAADAGATALSAQLADALALTGDCATAGRIA CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHH DELLTSQDPDERAAAVRISASIAMHDGSAAQAFDLFRWLGPSPDALLSAAGTVAALAAAD HHHHCCCCCCHHHHEEEEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC GDTARELARTQATGPPTSIARAARSLADGLMLSLDQPYPVAAARLGQSLNADAGVVTPDT CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHCCCCCCCCCCCCCCC PAALVTLAALHGGDPVRARSVMGRAVRSGRDDGSGDAIFVTYRHRLLLGWTHMQDGQLQA HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECEEEEEEECCCCCCHHH AATALPRPTADLHRRDALWAAALQTAIARRSGDSGAMQMHWYSAMEVLAEYSVDLFALLP HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCHHHHHCC LGELWVAAARLRQVERLQHTLDEAFALLTALGDPVLWSVPLHWAGVHAGILANSPEAVAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCCCC HGQALTAASRDGRAQSAFAKALASAGRTWLRVLANHVDVDEVSAAARGLAQFGHTWDATR CCCEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHH LAGQAALQTPDGRVSQAMLQIARDLKQSVAGAEVLTETTGMDAPTPAAATPAATPARAAP HHCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC AQLSEREREVAELLLLGMPYRDIGAQLFISAKTVEHHVARIRRRLGAESRSEMLSMLRAL HHHHHHHHHHHHHHHHCCCCHHHCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LAPSG HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA