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The map label for this gene is yhfW [H]

Identifier: 108797380

GI number: 108797380

Start: 445318

End: 446832

Strand: Reverse

Name: yhfW [H]

Synonym: Mmcs_0400

Alternate gene names: 108797380

Gene position: 446832-445318 (Counterclockwise)

Preceding gene: 108797390

Following gene: 108797378

Centisome position: 7.83

GC content: 69.37

Gene sequence:

>1515_bases
ATGACGTCACTGTGGCTGGCCGGCCGTCCCGAACAGGCCGTTGCCCCCAACCCGCTCGACGAAACCACCCGCTCCGCCGA
TGTTGTCGTGGTCGGCGCCGGGCTCACCGGTCTGGTCACCGCCGTCCTGTTGGCCCGCGCCGGGCGTGACGTGATGGTGC
TCGAGGCGTTCCGTGCGGGCGCGGGGGCGACGGGTAACACCACCGCCAAGATCAGCCTGCTGCAGGGCACGAAACTGTCG
AAGATCGTCGGCAAGCACGGCCCGGGCGTCGCGAAGAAGTACGTCGAGGGCAACCTCGAGGGCCAGGAGTGGCTGATCCA
GCGGTGTGAGAACCATGGGATCTCGGTGCAGCGCGAGGACGCCTTCACCTATGCGCAGTCGGACACGGGGTTGCCCGCGG
CGCGGGCGGAACTGGAGGCGTGTCAGGCGGCGGGTCTGGACGCGGAGTGGGTCGACGGGTCCCACGGGGCCCACGTGCCC
TTCCCGTTCGAGGGCGGTGTCCGGCTTGCCGGTCAGGCGCAGTTCGATCCGATGCCGTTGTTGGACAGCCTGATCGTCGA
ACTCGACGAGCGGGGCGGCCGGCTGATCCAGGGCGTGCGGGTGCAGCGGGTCTCCGGCACCGACGACGGTCTGACGCTGC
ACGTGCGCACCTCGGAGGGTGACGAGTTCGACGTCGACACGCGGCAGTGCGTGCTGGCGACGGGAATCCCGATCCTCGAC
CGCGGCGGGTTCTTCGCCCGTCTGAAACCGGCGCGGTCCTACTGCATGGCGTACAAGGTGCCCGGCACCATCACCCGCGG
CATGTATCTGTCCACCGACTCCCCCACCCGGTCGGTGCGTTACGCGCCGACCCAGGACGGGGATCGGCTGATCGTCGGCG
GGGCCGGACATCCGGTCGGCCGGGAGAAGCATCCGTCGTCGTCGGTGCAGGAACTCGACGCGTGGGCCAAACAGCACTAT
CCGGGTGCGATGCAGACGAACTACTGGTCCGCACAGGACTACTCACCGGCCGACGAGCTGCCCTACGTCGGGCCCATCCT
GCCCGGGCAGGACAAGATCTACGTGGCAACGGGTTTCGACAAGTGGGGGATGACCAACGGCGCCGCCGCCGCGCTGGCGT
TGTCGAGCAGCATCCTGGGCGGCCGGATGGACTGGGCCGACGCGTTCGCCAGTTGGAGCCCGCACGAGCTGTCGGGCATC
CCGAAGGCGGTGCAGGCCAACGTCGAGGTCGGCATCAACCTGGCCAAGGGATGGATCACGCCGGTGACACGGATCGCCGA
CCGGACCCCACAGTCCGGCGGTGTGGTCAGCGGACCGCCGTGGGCGCTGGAGGCGCGCAGCGTCGTCGACGGGGTGGAGC
ACCGGGTCTCGCCGGTGTGCCCGCACCTCGGCGGCATCGTCAACTGGAACGACTCCGACGAATCGTGGGAATGCCCGTTG
CACGGGTCGCGTTTCGCACCGGACGGGACCCTGCTCGAGGGCCCGGCGACGCGGGATCTCACGCGGTCTCTATGA

Upstream 100 bases:

>100_bases
GCCCAACGGGTCGCTCATCGGGTAATCACCCTAGTGGCATCGTTGTCCGCCTGCCGTCAACCCCTCGTTTCGGCGGGTTC
ACGGGGGGTAACACCCCCGC

Downstream 100 bases:

>100_bases
CTGTGACGGCCCGGGGATTTTCGCCGGCTCGTCGGGAAAAACCTTGCGCATCAACGCCGACCCGACGCTGCCGATGACGA
TCAGCGCGATGCCGACCGTG

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 504; Mature: 503

Protein sequence:

>504_residues
MTSLWLAGRPEQAVAPNPLDETTRSADVVVVGAGLTGLVTAVLLARAGRDVMVLEAFRAGAGATGNTTAKISLLQGTKLS
KIVGKHGPGVAKKYVEGNLEGQEWLIQRCENHGISVQREDAFTYAQSDTGLPAARAELEACQAAGLDAEWVDGSHGAHVP
FPFEGGVRLAGQAQFDPMPLLDSLIVELDERGGRLIQGVRVQRVSGTDDGLTLHVRTSEGDEFDVDTRQCVLATGIPILD
RGGFFARLKPARSYCMAYKVPGTITRGMYLSTDSPTRSVRYAPTQDGDRLIVGGAGHPVGREKHPSSSVQELDAWAKQHY
PGAMQTNYWSAQDYSPADELPYVGPILPGQDKIYVATGFDKWGMTNGAAAALALSSSILGGRMDWADAFASWSPHELSGI
PKAVQANVEVGINLAKGWITPVTRIADRTPQSGGVVSGPPWALEARSVVDGVEHRVSPVCPHLGGIVNWNDSDESWECPL
HGSRFAPDGTLLEGPATRDLTRSL

Sequences:

>Translated_504_residues
MTSLWLAGRPEQAVAPNPLDETTRSADVVVVGAGLTGLVTAVLLARAGRDVMVLEAFRAGAGATGNTTAKISLLQGTKLS
KIVGKHGPGVAKKYVEGNLEGQEWLIQRCENHGISVQREDAFTYAQSDTGLPAARAELEACQAAGLDAEWVDGSHGAHVP
FPFEGGVRLAGQAQFDPMPLLDSLIVELDERGGRLIQGVRVQRVSGTDDGLTLHVRTSEGDEFDVDTRQCVLATGIPILD
RGGFFARLKPARSYCMAYKVPGTITRGMYLSTDSPTRSVRYAPTQDGDRLIVGGAGHPVGREKHPSSSVQELDAWAKQHY
PGAMQTNYWSAQDYSPADELPYVGPILPGQDKIYVATGFDKWGMTNGAAAALALSSSILGGRMDWADAFASWSPHELSGI
PKAVQANVEVGINLAKGWITPVTRIADRTPQSGGVVSGPPWALEARSVVDGVEHRVSPVCPHLGGIVNWNDSDESWECPL
HGSRFAPDGTLLEGPATRDLTRSL
>Mature_503_residues
TSLWLAGRPEQAVAPNPLDETTRSADVVVVGAGLTGLVTAVLLARAGRDVMVLEAFRAGAGATGNTTAKISLLQGTKLSK
IVGKHGPGVAKKYVEGNLEGQEWLIQRCENHGISVQREDAFTYAQSDTGLPAARAELEACQAAGLDAEWVDGSHGAHVPF
PFEGGVRLAGQAQFDPMPLLDSLIVELDERGGRLIQGVRVQRVSGTDDGLTLHVRTSEGDEFDVDTRQCVLATGIPILDR
GGFFARLKPARSYCMAYKVPGTITRGMYLSTDSPTRSVRYAPTQDGDRLIVGGAGHPVGREKHPSSSVQELDAWAKQHYP
GAMQTNYWSAQDYSPADELPYVGPILPGQDKIYVATGFDKWGMTNGAAAALALSSSILGGRMDWADAFASWSPHELSGIP
KAVQANVEVGINLAKGWITPVTRIADRTPQSGGVVSGPPWALEARSVVDGVEHRVSPVCPHLGGIVNWNDSDESWECPLH
GSRFAPDGTLLEGPATRDLTRSL

Specific function: Unknown

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR017941
- InterPro:   IPR005805 [H]

Pfam domain/function: PF01266 DAO; PF00355 Rieske [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 53702; Mature: 53571

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLWLAGRPEQAVAPNPLDETTRSADVVVVGAGLTGLVTAVLLARAGRDVMVLEAFRAG
CCCEEECCCCCCCCCCCCHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEEEHHCC
AGATGNTTAKISLLQGTKLSKIVGKHGPGVAKKYVEGNLEGQEWLIQRCENHGISVQRED
CCCCCCCEEEEEEECCCHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCEEEECC
AFTYAQSDTGLPAARAELEACQAAGLDAEWVDGSHGAHVPFPFEGGVRLAGQAQFDPMPL
CEEEECCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCEEEECCCCCCCHHH
LDSLIVELDERGGRLIQGVRVQRVSGTDDGLTLHVRTSEGDEFDVDTRQCVLATGIPILD
HHHHHHHHHHCCCCEEECEEEEEECCCCCCEEEEEECCCCCCCCCCHHEEEEECCCCEEE
RGGFFARLKPARSYCMAYKVPGTITRGMYLSTDSPTRSVRYAPTQDGDRLIVGGAGHPVG
CCCCEEEECHHHHEEEEEECCCCEECCEEEECCCCCCCEEECCCCCCCEEEECCCCCCCC
REKHPSSSVQELDAWAKQHYPGAMQTNYWSAQDYSPADELPYVGPILPGQDKIYVATGFD
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEEEECCC
KWGMTNGAAAALALSSSILGGRMDWADAFASWSPHELSGIPKAVQANVEVGINLAKGWIT
CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHCCCCHHHCCCEEEEEEECCCHHH
PVTRIADRTPQSGGVVSGPPWALEARSVVDGVEHRVSPVCPHLGGIVNWNDSDESWECPL
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCCEECCC
HGSRFAPDGTLLEGPATRDLTRSL
CCCCCCCCCCEECCCCCHHHHHCC
>Mature Secondary Structure 
TSLWLAGRPEQAVAPNPLDETTRSADVVVVGAGLTGLVTAVLLARAGRDVMVLEAFRAG
CCEEECCCCCCCCCCCCHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEEEHHCC
AGATGNTTAKISLLQGTKLSKIVGKHGPGVAKKYVEGNLEGQEWLIQRCENHGISVQRED
CCCCCCCEEEEEEECCCHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCEEEECC
AFTYAQSDTGLPAARAELEACQAAGLDAEWVDGSHGAHVPFPFEGGVRLAGQAQFDPMPL
CEEEECCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCEEEECCCCCCCHHH
LDSLIVELDERGGRLIQGVRVQRVSGTDDGLTLHVRTSEGDEFDVDTRQCVLATGIPILD
HHHHHHHHHHCCCCEEECEEEEEECCCCCCEEEEEECCCCCCCCCCHHEEEEECCCCEEE
RGGFFARLKPARSYCMAYKVPGTITRGMYLSTDSPTRSVRYAPTQDGDRLIVGGAGHPVG
CCCCEEEECHHHHEEEEEECCCCEECCEEEECCCCCCCEEECCCCCCCEEEECCCCCCCC
REKHPSSSVQELDAWAKQHYPGAMQTNYWSAQDYSPADELPYVGPILPGQDKIYVATGFD
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEEEECCC
KWGMTNGAAAALALSSSILGGRMDWADAFASWSPHELSGIPKAVQANVEVGINLAKGWIT
CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHCCCCHHHCCCEEEEEEECCCHHH
PVTRIADRTPQSGGVVSGPPWALEARSVVDGVEHRVSPVCPHLGGIVNWNDSDESWECPL
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCCEECCC
HGSRFAPDGTLLEGPATRDLTRSL
CCCCCCCCCCEECCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]