| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797348
Identifier: 108797348
GI number: 108797348
Start: 410183
End: 411094
Strand: Direct
Name: 108797348
Synonym: Mmcs_0368
Alternate gene names: NA
Gene position: 410183-411094 (Clockwise)
Preceding gene: 108797343
Following gene: 108797349
Centisome position: 7.19
GC content: 68.86
Gene sequence:
>912_bases GTGACGGTCAGCGAACCGCTTCCGCACGTCGAGCGTCCGGTCAGCGCGCCCGCGCACCCCGACAAGCTGACCCCACCCCC TGCGCTGGCCCGGCGCGCCGCCAGCATGGAGGACGGGCTGATGGGCGTCGCGCTGCTGGCCGGCCCGGCGAACGTGATCA TGCAGTTGGCCCGTCCGGGCGTCGGTTACGGCGTGCTGGAGAGCCGCGTCGAAAGCGGCCGCGTCGACCTGCACCCGGTC AAACGCGCCCGCACCACCTTCACCTATCTGGCCGTCGCGACCCGGGGGAGCGACGCGCAGAAGGCGGCGTTCCGCCGGGC CGTGAACAAGGCGCACGCCCAGGTGTACTCCACCGACGAGAGCCCGGTGAAATACCACGCCTTCGACAAGGACCTGCAGC TGTGGGTCGCGGCCTGTCTCTACAAGGGCGCGGTGGACGTGTATCGGCTCTTCGTCGGGGAAATGGACGACCAGGCCGCC GAAGAGCACTACCGCGACAGCATGACGATGGGCACCACGCTGCAGGTGCCGCCGGAGATGTGGCCCGCCGACAGGGCGGC GTTCGACAAGTACTGGCAGGAATCGCTCGACAAGGTGCACATCGACGACACCGTGCGCGAATACCTCTATCCGATCGCGG CGTCGCGGCTGCGCGGGCTGAAACTGCCCGGCCCGTTGCAGCGCAGGAACGAAGAACTCGCGCTGCTGATCACCACCGGC TTCCTGCCGCAGCGCTTCCGCGACGAGATGCGGCTGCCCTGGGACGCCGACCGGCAGCGCCGATTCGACCGCCTCATCGG GGTGTTGCGCACCGTCAACCACCTGCTGCCGCGGTTCATCCGGCAGTTCCCGTTCAACGTGCTGCTCAAGGATCTGGATC GCCGCATCCGCACAGGGCGCCCGCTGATCTGA
Upstream 100 bases:
>100_bases CCGCGGTAGGGCCGCACCTGTCCCATGCACCCATCTTGACACCCGTCGATGCGGCGGGGGAAAATCAGGAAACATTCGTT CTCACATTTAGGGGTGGCCA
Downstream 100 bases:
>100_bases CGCGTATAACCGAATCGTGCGTCACGACAACGATTCCTGGGACATCACCACCAGCGTCGGATCGACCGCCCTCTTCGTGG CGGCATCCCGGGCGCTGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MTVSEPLPHVERPVSAPAHPDKLTPPPALARRAASMEDGLMGVALLAGPANVIMQLARPGVGYGVLESRVESGRVDLHPV KRARTTFTYLAVATRGSDAQKAAFRRAVNKAHAQVYSTDESPVKYHAFDKDLQLWVAACLYKGAVDVYRLFVGEMDDQAA EEHYRDSMTMGTTLQVPPEMWPADRAAFDKYWQESLDKVHIDDTVREYLYPIAASRLRGLKLPGPLQRRNEELALLITTG FLPQRFRDEMRLPWDADRQRRFDRLIGVLRTVNHLLPRFIRQFPFNVLLKDLDRRIRTGRPLI
Sequences:
>Translated_303_residues MTVSEPLPHVERPVSAPAHPDKLTPPPALARRAASMEDGLMGVALLAGPANVIMQLARPGVGYGVLESRVESGRVDLHPV KRARTTFTYLAVATRGSDAQKAAFRRAVNKAHAQVYSTDESPVKYHAFDKDLQLWVAACLYKGAVDVYRLFVGEMDDQAA EEHYRDSMTMGTTLQVPPEMWPADRAAFDKYWQESLDKVHIDDTVREYLYPIAASRLRGLKLPGPLQRRNEELALLITTG FLPQRFRDEMRLPWDADRQRRFDRLIGVLRTVNHLLPRFIRQFPFNVLLKDLDRRIRTGRPLI >Mature_302_residues TVSEPLPHVERPVSAPAHPDKLTPPPALARRAASMEDGLMGVALLAGPANVIMQLARPGVGYGVLESRVESGRVDLHPVK RARTTFTYLAVATRGSDAQKAAFRRAVNKAHAQVYSTDESPVKYHAFDKDLQLWVAACLYKGAVDVYRLFVGEMDDQAAE EHYRDSMTMGTTLQVPPEMWPADRAAFDKYWQESLDKVHIDDTVREYLYPIAASRLRGLKLPGPLQRRNEELALLITTGF LPQRFRDEMRLPWDADRQRRFDRLIGVLRTVNHLLPRFIRQFPFNVLLKDLDRRIRTGRPLI
Specific function: Unknown
COG id: COG3662
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018713 [H]
Pfam domain/function: PF09995 DUF2236 [H]
EC number: NA
Molecular weight: Translated: 34435; Mature: 34304
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSEPLPHVERPVSAPAHPDKLTPPPALARRAASMEDGLMGVALLAGPANVIMQLARPG CCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHCCC VGYGVLESRVESGRVDLHPVKRARTTFTYLAVATRGSDAQKAAFRRAVNKAHAQVYSTDE CCHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHCCCCC SPVKYHAFDKDLQLWVAACLYKGAVDVYRLFVGEMDDQAAEEHYRDSMTMGTTLQVPPEM CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEECCCCC WPADRAAFDKYWQESLDKVHIDDTVREYLYPIAASRLRGLKLPGPLQRRNEELALLITTG CCCHHHHHHHHHHHHHCEECHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEEEEECC FLPQRFRDEMRLPWDADRQRRFDRLIGVLRTVNHLLPRFIRQFPFNVLLKDLDRRIRTGR CCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC PLI CCC >Mature Secondary Structure TVSEPLPHVERPVSAPAHPDKLTPPPALARRAASMEDGLMGVALLAGPANVIMQLARPG CCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHCCC VGYGVLESRVESGRVDLHPVKRARTTFTYLAVATRGSDAQKAAFRRAVNKAHAQVYSTDE CCHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHCCCCC SPVKYHAFDKDLQLWVAACLYKGAVDVYRLFVGEMDDQAAEEHYRDSMTMGTTLQVPPEM CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEECCCCC WPADRAAFDKYWQESLDKVHIDDTVREYLYPIAASRLRGLKLPGPLQRRNEELALLITTG CCCHHHHHHHHHHHHHCEECHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEEEEECC FLPQRFRDEMRLPWDADRQRRFDRLIGVLRTVNHLLPRFIRQFPFNVLLKDLDRRIRTGR CCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC PLI CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]