Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797257
Identifier: 108797257
GI number: 108797257
Start: 316313
End: 317395
Strand: Direct
Name: 108797257
Synonym: Mmcs_0277
Alternate gene names: NA
Gene position: 316313-317395 (Clockwise)
Preceding gene: 108797256
Following gene: 108797258
Centisome position: 5.54
GC content: 65.93
Gene sequence:
>1083_bases ATGCTGAAATATGGTGGATCATCCTCGGTCCGTGCCGGTTTCATCGGCCTGGTGCTCATCGTGCTGGTCATCGTCGTCGG CCTTCAGCCGCAGCAGCTGTGGTCGATGGCGACCTCGGTGAAGTACCGGGCGGTGTTCGCCGAGGCCGGCGGGCTCGCTG CCGGTAACGATGTCAAGGTCTCCGGCGTCACCGTCGGAACGGTGTCCGACGTGGTGCTGGACAAGGGCAAGGCGCTGGTG ACCTTCTCCCTCGACGGGAAGGTGCGGCTGGGTTCGGATTCGACCGCTCACATCCGCACCGGCACCCTGCTCGGCGAGCG GATGCTGACGGTGGAACCCAAGGGCTCGCGGCGGCTGGGCCCCATGGAGGCGATCCCGGTTTCGCGGACGTCGTCGCCCT ACTCGCTGACCGAGGCGGTCAGCGATTTCACCGCCAACACCGCCGACACCGACACGGCCACGTTGAACCAGTCGCTGGAC ATCCTGTCCGAGACGATCGACCGGCTGGCACCCCAGCTCGGCCCGACCTTCGATGGCCTGACCGAACTCTCCCGGTCCCT CAACGACCGCGACGAGACGCTGGGTGACCTGCTCGCCGGTGCCGCCGACGTCACCGCAATCCTGTCCGAGCGGAGCCAGC AGGTGAACACGCTGCTGCTGAGCGCCAACGACCTGCTGGCGGTTCTCGAACAGCGCCGCTACGCGATCGTCAACCTGCTC GCCAACACCTCCGCGATGTCGCAACAGCTGACCGGTCTGGTGCGGGACAACGAACAGGAACTCGCGCCGGCGCTGGAGAA GCTCAACTCCGTATCGGAGATGTTGGAGCGCAACCGGGACAACATCGGCAAAGCCCTCAACGGCCTCGCCAAGTATCAGG TGACCCAGGGCGAAGCGGTCAACAACGGGTTCTACTACAACGCCTTCATCGGCAACCTGATACCGGGTGGGGCGCTGCAG CCGTTCCTCGACTACGCGCTCGGCTACCGGCGCGGTGTCAATGCCGGCCAGCCTCCGGACAACGCCGGTCCGCGCGCCGA ATTCCCGCTCCCCTACAACGGCATCCCGGGTGGTTCACGATGA
Upstream 100 bases:
>100_bases AGTACCTCTGCGGGCTGTCCGTACGAGTCACCGATCTGCAGGGGCGCACCGCCTACTTCCCCTGGATCAAGCAAGACACC GGAAGGTGTGCTGAGCCCTG
Downstream 100 bases:
>100_bases TCGGCCGCACCAAGTCCGCCAAGGTCCTGACCGTCGCGTTGGTGGCGTTGCTCGCCGCCGGCGCCGCGGTGATCGTGCGG CAGGAGTTCTTCGCGCCGCG
Product: virulence factor MCE-like protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family C; MCE Family Protein; Mce Family C; MCE-Family Protein; Mce-Family C; Mce-Related Protein
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MLKYGGSSSVRAGFIGLVLIVLVIVVGLQPQQLWSMATSVKYRAVFAEAGGLAAGNDVKVSGVTVGTVSDVVLDKGKALV TFSLDGKVRLGSDSTAHIRTGTLLGERMLTVEPKGSRRLGPMEAIPVSRTSSPYSLTEAVSDFTANTADTDTATLNQSLD ILSETIDRLAPQLGPTFDGLTELSRSLNDRDETLGDLLAGAADVTAILSERSQQVNTLLLSANDLLAVLEQRRYAIVNLL ANTSAMSQQLTGLVRDNEQELAPALEKLNSVSEMLERNRDNIGKALNGLAKYQVTQGEAVNNGFYYNAFIGNLIPGGALQ PFLDYALGYRRGVNAGQPPDNAGPRAEFPLPYNGIPGGSR
Sequences:
>Translated_360_residues MLKYGGSSSVRAGFIGLVLIVLVIVVGLQPQQLWSMATSVKYRAVFAEAGGLAAGNDVKVSGVTVGTVSDVVLDKGKALV TFSLDGKVRLGSDSTAHIRTGTLLGERMLTVEPKGSRRLGPMEAIPVSRTSSPYSLTEAVSDFTANTADTDTATLNQSLD ILSETIDRLAPQLGPTFDGLTELSRSLNDRDETLGDLLAGAADVTAILSERSQQVNTLLLSANDLLAVLEQRRYAIVNLL ANTSAMSQQLTGLVRDNEQELAPALEKLNSVSEMLERNRDNIGKALNGLAKYQVTQGEAVNNGFYYNAFIGNLIPGGALQ PFLDYALGYRRGVNAGQPPDNAGPRAEFPLPYNGIPGGSR >Mature_360_residues MLKYGGSSSVRAGFIGLVLIVLVIVVGLQPQQLWSMATSVKYRAVFAEAGGLAAGNDVKVSGVTVGTVSDVVLDKGKALV TFSLDGKVRLGSDSTAHIRTGTLLGERMLTVEPKGSRRLGPMEAIPVSRTSSPYSLTEAVSDFTANTADTDTATLNQSLD ILSETIDRLAPQLGPTFDGLTELSRSLNDRDETLGDLLAGAADVTAILSERSQQVNTLLLSANDLLAVLEQRRYAIVNLL ANTSAMSQQLTGLVRDNEQELAPALEKLNSVSEMLERNRDNIGKALNGLAKYQVTQGEAVNNGFYYNAFIGNLIPGGALQ PFLDYALGYRRGVNAGQPPDNAGPRAEFPLPYNGIPGGSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38199; Mature: 38199
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKYGGSSSVRAGFIGLVLIVLVIVVGLQPQQLWSMATSVKYRAVFAEAGGLAAGNDVKV CCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEECCCCCCCCCCEEE SGVTVGTVSDVVLDKGKALVTFSLDGKVRLGSDSTAHIRTGTLLGERMLTVEPKGSRRLG EEEEECHHHHHHHCCCCEEEEEEECCEEEECCCCCCEEEECHHHCCEEEEECCCCCCCCC PMEAIPVSRTSSPYSLTEAVSDFTANTADTDTATLNQSLDILSETIDRLAPQLGPTFDGL CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH TELSRSLNDRDETLGDLLAGAADVTAILSERSQQVNTLLLSANDLLAVLEQRRYAIVNLL HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHH ANTSAMSQQLTGLVRDNEQELAPALEKLNSVSEMLERNRDNIGKALNGLAKYQVTQGEAV HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHEEECCCCCC NNGFYYNAFIGNLIPGGALQPFLDYALGYRRGVNAGQPPDNAGPRAEFPLPYNGIPGGSR CCCEEEEEHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLKYGGSSSVRAGFIGLVLIVLVIVVGLQPQQLWSMATSVKYRAVFAEAGGLAAGNDVKV CCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEECCCCCCCCCCEEE SGVTVGTVSDVVLDKGKALVTFSLDGKVRLGSDSTAHIRTGTLLGERMLTVEPKGSRRLG EEEEECHHHHHHHCCCCEEEEEEECCEEEECCCCCCEEEECHHHCCEEEEECCCCCCCCC PMEAIPVSRTSSPYSLTEAVSDFTANTADTDTATLNQSLDILSETIDRLAPQLGPTFDGL CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH TELSRSLNDRDETLGDLLAGAADVTAILSERSQQVNTLLLSANDLLAVLEQRRYAIVNLL HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHH ANTSAMSQQLTGLVRDNEQELAPALEKLNSVSEMLERNRDNIGKALNGLAKYQVTQGEAV HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHEEECCCCCC NNGFYYNAFIGNLIPGGALQPFLDYALGYRRGVNAGQPPDNAGPRAEFPLPYNGIPGGSR CCCEEEEEHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA