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The map label for this gene is yggA [C]

Identifier: 108797252

GI number: 108797252

Start: 311595

End: 312194

Strand: Reverse

Name: yggA [C]

Synonym: Mmcs_0272

Alternate gene names: 108797252

Gene position: 312194-311595 (Counterclockwise)

Preceding gene: 108797261

Following gene: 108797251

Centisome position: 5.47

GC content: 71.33

Gene sequence:

>600_bases
GTGACCTACCCCGTCGTCCTCGGCTTTCTGTCGGCGCTCACGCTGATCGCCGCCATCGGCGCGCAGAACGCGTTCGTCCT
GCGCCAGGGCATCCGTGGTGAACACGTCGCCGCCGTCGTCGCGTTGTGCACGGTGTCCGACGTCCTGTTGATCGGCGCCG
GCATCGCCGGCTTCGGCGCGCTCGTCACCGCCCACCCCGCAGCGCTGGACATCGCACGGTTCGGTGGCGCCGCGTTCCTG
ATCGGCTATGGACTGTTGGCCGCCCGGCGCGCCGCGCGACCGGCCGCACTCACGCCATCGGAGCAGGGCCCGGCCCGCCT
CGTCGGGGTGCTCGTCACATGCGCGGCACTGACGTGGCTCAACCCCCACGTCTATCTCGACACGGTCGTGCTGCTCGGCG
CCCTGGCCAACGAGCACCGCGAGGACCGCTGGCTCTTCGGTGTCGGCGCCGTCACGGCGAGCGCCGTCTGGTTCACCGCT
CTGGGCTTCGGCGCGCGCCGCCTCGGCGGCCTGTTCTCGGCACCGTCGACGTGGCGGGTTCTCGACGCGCTGATCGCAAT
GATCATGATCGCTCTCGGCGTCGCCGTCGCGCTCGGATGA

Upstream 100 bases:

>100_bases
TTCATTCGGGTCGACGGACCCGAGAGATCATCAGTTTTTCTGATGATGCGTGAAAATCTTTAGCTGTACTGGTTCATGAC
GGCCTCTTACCGTCGACGTC

Downstream 100 bases:

>100_bases
GTTTCTTGATTTCCTGACGACAAATCCCAGGAAATCTGTTCTCCAGCGAATTCGGAGCGTAGCCTGGGCGCAGGCCTGGG
GCTCTCCCGAGCGGTTGTTC

Product: lysine exporter protein LysE/YggA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MTYPVVLGFLSALTLIAAIGAQNAFVLRQGIRGEHVAAVVALCTVSDVLLIGAGIAGFGALVTAHPAALDIARFGGAAFL
IGYGLLAARRAARPAALTPSEQGPARLVGVLVTCAALTWLNPHVYLDTVVLLGALANEHREDRWLFGVGAVTASAVWFTA
LGFGARRLGGLFSAPSTWRVLDALIAMIMIALGVAVALG

Sequences:

>Translated_199_residues
MTYPVVLGFLSALTLIAAIGAQNAFVLRQGIRGEHVAAVVALCTVSDVLLIGAGIAGFGALVTAHPAALDIARFGGAAFL
IGYGLLAARRAARPAALTPSEQGPARLVGVLVTCAALTWLNPHVYLDTVVLLGALANEHREDRWLFGVGAVTASAVWFTA
LGFGARRLGGLFSAPSTWRVLDALIAMIMIALGVAVALG
>Mature_198_residues
TYPVVLGFLSALTLIAAIGAQNAFVLRQGIRGEHVAAVVALCTVSDVLLIGAGIAGFGALVTAHPAALDIARFGGAAFLI
GYGLLAARRAARPAALTPSEQGPARLVGVLVTCAALTWLNPHVYLDTVVLLGALANEHREDRWLFGVGAVTASAVWFTAL
GFGARRLGGLFSAPSTWRVLDALIAMIMIALGVAVALG

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=150, Percent_Identity=40.6666666666667, Blast_Score=104, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 20425; Mature: 20294

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYPVVLGFLSALTLIAAIGAQNAFVLRQGIRGEHVAAVVALCTVSDVLLIGAGIAGFGA
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH
LVTAHPAALDIARFGGAAFLIGYGLLAARRAARPAALTPSEQGPARLVGVLVTCAALTWL
HHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
NPHVYLDTVVLLGALANEHREDRWLFGVGAVTASAVWFTALGFGARRLGGLFSAPSTWRV
CCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
LDALIAMIMIALGVAVALG
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TYPVVLGFLSALTLIAAIGAQNAFVLRQGIRGEHVAAVVALCTVSDVLLIGAGIAGFGA
CHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH
LVTAHPAALDIARFGGAAFLIGYGLLAARRAARPAALTPSEQGPARLVGVLVTCAALTWL
HHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
NPHVYLDTVVLLGALANEHREDRWLFGVGAVTASAVWFTALGFGARRLGGLFSAPSTWRV
CCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
LDALIAMIMIALGVAVALG
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]