| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797201
Identifier: 108797201
GI number: 108797201
Start: 242472
End: 243674
Strand: Reverse
Name: 108797201
Synonym: Mmcs_0221
Alternate gene names: NA
Gene position: 243674-242472 (Counterclockwise)
Preceding gene: 108797203
Following gene: 108797200
Centisome position: 4.27
GC content: 66.67
Gene sequence:
>1203_bases TTGAACCGCGCAGTGGCGCTGCGGATCGCGGCGTGCGGACTCATGGGGCTCGGTGCTGCCCTGCTGATCGCCGCGCTGTT GCTGTCCACCTATACCAAGGGCAAGATCTCGAAGGTTCCGCTGGACATCGACACGACGTTGATCAGCGACGGAACCGGTA CCGCCTTCGATCCGGCGTCGCTGCTGGGCGAGCGATTCGTCGTCGACCGGGACATCCCGATGGCCTTCCAGCAGCAGATC ACCGTGGAGTCGCCGTCGAACGCCGACGTGGTGACCCTGCAGGTCGGCAGCACGCTGCGACGCACCGACAAACAGCAGGA CAACGGTCTGCTGCTGGCGATGGTCGACACCGTGACCATGGACCGGTCGTCGGCGATGGCGGTAACCAGTGAGAGCAATC CGGGTGGCGCGGTGCAGAAGCCGCGGGCCATCGAGGACGATCAGCCGCCGACCAACATCGCGCTGCCGCACGACGGGTTG ACCTACCGGTTCCCGTTCGACACGGAGAAGAAGACCTACCCGCTGTTCGACCCGATCGCCCAGAAGGCCTACGACGCCAA CTACGACGGCGAAGAAGACGTCAACGGGTTGACCACCTACAAGTTCACCCAGAACGTCGGCTACGACGCCGAGGGCAAGC TGGTCGAACCGGTGAAGTACGCCTCGCTGTACGAAGACGACGCCGACGCTCAGGTCACCGCCCGCGCCGCGCTCTGGGGA GTCGAGGGCGATCCCGAAGAGCCGATCACGATGAGCCGGTTCTACGCCGCAGAACGCACCCTGTGGGTCGATCCGGTATC GGGCACCATCGTCAAATCCGACGAGCACGGCTACCACTACTACGCCCGGGACGCATTGCGGCCCGAGGTGACCTTCGCCG ACTACACGGTCACGACGAACGAGGAGTCGGTGGAGTCGCAGGTGGCCAGCGCCCGCAGCGAACGCGACCGCGTCGCGCTC TGGGGCCGCATCCTGCCGATCACCTTCACGGCGGTCGGGCTGGTGTTGCTCGTGGGCGGTGCCCTGCTCGGCTCGTTCAG CCTGCGCGCGGAGTCGGCACTGATCGATCCGGGACTCGACGAGGCCGACCACGGGTTCTTCCAGCGCGACGACGCCGGTG AACCGGTGCCGGGCGCCGAGGCCAAGACCGAGAAGCTGCCGGCCCAGCGGCCGACCGATCTACCGCCCGACAGACCGGTC TGA
Upstream 100 bases:
>100_bases CTGAGCCGGGCGCGGTGGAGGTCTCGTAGTAAGTTCCCGCCTTAATGTCTGCTGTTAGGGTCAAACGGGTTTTGCCGTCC CGAGCCGAAGGAGGCACGGT
Downstream 100 bases:
>100_bases TCTCCCGCCACCTCCCGCCGGTCTACGCGCTGGCGCTGTCGCTGATCGTGACCGCGCCGCTGCTGCCGCCTGGCTACCTG CTGCTGCGCGATGCGGTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MNRAVALRIAACGLMGLGAALLIAALLLSTYTKGKISKVPLDIDTTLISDGTGTAFDPASLLGERFVVDRDIPMAFQQQI TVESPSNADVVTLQVGSTLRRTDKQQDNGLLLAMVDTVTMDRSSAMAVTSESNPGGAVQKPRAIEDDQPPTNIALPHDGL TYRFPFDTEKKTYPLFDPIAQKAYDANYDGEEDVNGLTTYKFTQNVGYDAEGKLVEPVKYASLYEDDADAQVTARAALWG VEGDPEEPITMSRFYAAERTLWVDPVSGTIVKSDEHGYHYYARDALRPEVTFADYTVTTNEESVESQVASARSERDRVAL WGRILPITFTAVGLVLLVGGALLGSFSLRAESALIDPGLDEADHGFFQRDDAGEPVPGAEAKTEKLPAQRPTDLPPDRPV
Sequences:
>Translated_400_residues MNRAVALRIAACGLMGLGAALLIAALLLSTYTKGKISKVPLDIDTTLISDGTGTAFDPASLLGERFVVDRDIPMAFQQQI TVESPSNADVVTLQVGSTLRRTDKQQDNGLLLAMVDTVTMDRSSAMAVTSESNPGGAVQKPRAIEDDQPPTNIALPHDGL TYRFPFDTEKKTYPLFDPIAQKAYDANYDGEEDVNGLTTYKFTQNVGYDAEGKLVEPVKYASLYEDDADAQVTARAALWG VEGDPEEPITMSRFYAAERTLWVDPVSGTIVKSDEHGYHYYARDALRPEVTFADYTVTTNEESVESQVASARSERDRVAL WGRILPITFTAVGLVLLVGGALLGSFSLRAESALIDPGLDEADHGFFQRDDAGEPVPGAEAKTEKLPAQRPTDLPPDRPV >Mature_400_residues MNRAVALRIAACGLMGLGAALLIAALLLSTYTKGKISKVPLDIDTTLISDGTGTAFDPASLLGERFVVDRDIPMAFQQQI TVESPSNADVVTLQVGSTLRRTDKQQDNGLLLAMVDTVTMDRSSAMAVTSESNPGGAVQKPRAIEDDQPPTNIALPHDGL TYRFPFDTEKKTYPLFDPIAQKAYDANYDGEEDVNGLTTYKFTQNVGYDAEGKLVEPVKYASLYEDDADAQVTARAALWG VEGDPEEPITMSRFYAAERTLWVDPVSGTIVKSDEHGYHYYARDALRPEVTFADYTVTTNEESVESQVASARSERDRVAL WGRILPITFTAVGLVLLVGGALLGSFSLRAESALIDPGLDEADHGFFQRDDAGEPVPGAEAKTEKLPAQRPTDLPPDRPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43367; Mature: 43367
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRAVALRIAACGLMGLGAALLIAALLLSTYTKGKISKVPLDIDTTLISDGTGTAFDPAS CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCEEEEECCCCCCCCHHH LLGERFVVDRDIPMAFQQQITVESPSNADVVTLQVGSTLRRTDKQQDNGLLLAMVDTVTM HHCCCEEEECCCCHHHHHEEEEECCCCCCEEEEECCCHHHHCCCCCCCCEEEEEEEEEEE DRSSAMAVTSESNPGGAVQKPRAIEDDQPPTNIALPHDGLTYRFPFDTEKKTYPLFDPIA CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEECCCCCCCCCCCCHHHHH QKAYDANYDGEEDVNGLTTYKFTQNVGYDAEGKLVEPVKYASLYEDDADAQVTARAALWG HHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEECCCHHHHHHCCCCCCEEEEEEEEEC VEGDPEEPITMSRFYAAERTLWVDPVSGTIVKSDEHGYHYYARDALRPEVTFADYTVTTN CCCCCCCCEEHHHHHHHCCEEEEECCCCEEEECCCCCCEEEECCCCCCCEEEEEEEEECC EESVESQVASARSERDRVALWGRILPITFTAVGLVLLVGGALLGSFSLRAESALIDPGLD HHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCC EADHGFFQRDDAGEPVPGAEAKTEKLPAQRPTDLPPDRPV CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MNRAVALRIAACGLMGLGAALLIAALLLSTYTKGKISKVPLDIDTTLISDGTGTAFDPAS CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCEEEEECCCCCCCCHHH LLGERFVVDRDIPMAFQQQITVESPSNADVVTLQVGSTLRRTDKQQDNGLLLAMVDTVTM HHCCCEEEECCCCHHHHHEEEEECCCCCCEEEEECCCHHHHCCCCCCCCEEEEEEEEEEE DRSSAMAVTSESNPGGAVQKPRAIEDDQPPTNIALPHDGLTYRFPFDTEKKTYPLFDPIA CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEECCCCCCCCCCCCHHHHH QKAYDANYDGEEDVNGLTTYKFTQNVGYDAEGKLVEPVKYASLYEDDADAQVTARAALWG HHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEECCCHHHHHHCCCCCCEEEEEEEEEC VEGDPEEPITMSRFYAAERTLWVDPVSGTIVKSDEHGYHYYARDALRPEVTFADYTVTTN CCCCCCCCEEHHHHHHHCCEEEEECCCCEEEECCCCCCEEEECCCCCCCEEEEEEEEECC EESVESQVASARSERDRVALWGRILPITFTAVGLVLLVGGALLGSFSLRAESALIDPGLD HHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCC EADHGFFQRDDAGEPVPGAEAKTEKLPAQRPTDLPPDRPV CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA