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The map label for this gene is mmgC [H]

Identifier: 108797193

GI number: 108797193

Start: 233652

End: 234809

Strand: Reverse

Name: mmgC [H]

Synonym: Mmcs_0213

Alternate gene names: 108797193

Gene position: 234809-233652 (Counterclockwise)

Preceding gene: 108797196

Following gene: 108797192

Centisome position: 4.12

GC content: 71.85

Gene sequence:

>1158_bases
GTGGGTGAATTAGAGGCGCTGTGCGCCAACGACGATGACCTGGCGGCGCTGCGGACGTCGATCCGGGAGTTCCTGGCCGC
CGATCGCGCGGCCCACGGCTGGCAGCCGGCGGTCGACTGCTGGCTGGCGGCGTGGGACCCCGAGTTCAGCGTGCGGCTGG
CCGCGGCCGGATTTCTCGGGCTGACGATCCCGACCGAGTACGGCGGGCACGGGCTCGGGCATCTACACCGCTACGTCGTG
ACCGAGGAGCTGCTCGCGCACGGCGCACCCGTCGCCGCGCACTGGATCGCCGACCGCCAGGTCGCGCCCGGCCTGCTCAC
GTACGGCACCGAGGAACAGCGCCGACGGCTGCTGCCCCGCATCGCCGCCGGCCGGCTGTCCTCGGCGATCGGGATGAGCG
AACACGGCGCCGGTTCGGACCTCGCGGCGGTCGCCACCCGCGCCACCGAGGTCGACGGCGGCTGGCGGCTCGACGGTACG
AAAGTGTGGACCAGCGGAGCCCACGTCGCCGACCAGGTCGTGGTGCTGGCGCGCAGCGCCCCCGTCGACCCCGACCACCG
GCACGCAGGGTTCAGCCAGTTCATCGTCCCCACCGACGCACCCGGGGTGACGATCAGCCCGATCGTGCTGATGAACGGCG
AACACCACTTCAATGAGGTGCTGTTCGACGGCGTGTTCGTCCCGCACGCCGACGTGCTCGGCGAGATCGGGAACGGATGG
CATCAGGTGACGGCGGAACTCGGGTTCGAACGCAGCGGCCCGGAACGGATCCTGTCGACGGCGACGCTGGTGTTCGAGGC
GGTGGCCGCCCTCGGCCGCGCGGGCGTCGACGACCGCACCGCCGCCGAGGTGGGCGACCTGATGGCCCGGATGGTGTCGC
TGCGTCAGCTGTCCATCTCCGTGGCACGCGAACTCACCGCCGGGCGCGACGCGAACACCAGGGCGGCGCTGGTGAAGGAT
CTCGGCACCCGCTTCGAACAGAAGTCGGTGGAGATCGTTGCCGGCCTGCTCACCTCCCTCGACGAGGACGCGCCGGAGGC
CGAACGGCTGCGCGGGCTGCTGGCGACGGGTCGTCTGCATGCGCCGCTGTTCACATTGCGGGGCGGGACGAACGAGGTGT
TGCGGGGCGTGGTCGCCCGCGGGCTGGGGGTGCGATGA

Upstream 100 bases:

>100_bases
GTTGGTGGCGTGCTCACTCACGGATCCGAGTATGGCCGCCGCCCACCCACAGGGACATGACAATTCCTGCTGCGTCCGCG
CTCACTACACTCCACCGCCA

Downstream 100 bases:

>100_bases
GCGCTTGCGCGAAGAGCCGGGGACTGCGATGAGCGCTTGCGCGAAGAGCCGAGGAAGCAGATGAACGACGAATTACGCCA
ACTGGTCGACGATCTCGCGC

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MGELEALCANDDDLAALRTSIREFLAADRAAHGWQPAVDCWLAAWDPEFSVRLAAAGFLGLTIPTEYGGHGLGHLHRYVV
TEELLAHGAPVAAHWIADRQVAPGLLTYGTEEQRRRLLPRIAAGRLSSAIGMSEHGAGSDLAAVATRATEVDGGWRLDGT
KVWTSGAHVADQVVVLARSAPVDPDHRHAGFSQFIVPTDAPGVTISPIVLMNGEHHFNEVLFDGVFVPHADVLGEIGNGW
HQVTAELGFERSGPERILSTATLVFEAVAALGRAGVDDRTAAEVGDLMARMVSLRQLSISVARELTAGRDANTRAALVKD
LGTRFEQKSVEIVAGLLTSLDEDAPEAERLRGLLATGRLHAPLFTLRGGTNEVLRGVVARGLGVR

Sequences:

>Translated_385_residues
MGELEALCANDDDLAALRTSIREFLAADRAAHGWQPAVDCWLAAWDPEFSVRLAAAGFLGLTIPTEYGGHGLGHLHRYVV
TEELLAHGAPVAAHWIADRQVAPGLLTYGTEEQRRRLLPRIAAGRLSSAIGMSEHGAGSDLAAVATRATEVDGGWRLDGT
KVWTSGAHVADQVVVLARSAPVDPDHRHAGFSQFIVPTDAPGVTISPIVLMNGEHHFNEVLFDGVFVPHADVLGEIGNGW
HQVTAELGFERSGPERILSTATLVFEAVAALGRAGVDDRTAAEVGDLMARMVSLRQLSISVARELTAGRDANTRAALVKD
LGTRFEQKSVEIVAGLLTSLDEDAPEAERLRGLLATGRLHAPLFTLRGGTNEVLRGVVARGLGVR
>Mature_384_residues
GELEALCANDDDLAALRTSIREFLAADRAAHGWQPAVDCWLAAWDPEFSVRLAAAGFLGLTIPTEYGGHGLGHLHRYVVT
EELLAHGAPVAAHWIADRQVAPGLLTYGTEEQRRRLLPRIAAGRLSSAIGMSEHGAGSDLAAVATRATEVDGGWRLDGTK
VWTSGAHVADQVVVLARSAPVDPDHRHAGFSQFIVPTDAPGVTISPIVLMNGEHHFNEVLFDGVFVPHADVLGEIGNGWH
QVTAELGFERSGPERILSTATLVFEAVAALGRAGVDDRTAAEVGDLMARMVSLRQLSISVARELTAGRDANTRAALVKDL
GTRFEQKSVEIVAGLLTSLDEDAPEAERLRGLLATGRLHAPLFTLRGGTNEVLRGVVARGLGVR

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958414, Length=353, Percent_Identity=27.1954674220963, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI226958412, Length=353, Percent_Identity=27.1954674220963, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI76496475, Length=349, Percent_Identity=29.2263610315186, Blast_Score=102, Evalue=6e-22,
Organism=Homo sapiens, GI4557235, Length=349, Percent_Identity=29.2263610315186, Blast_Score=102, Evalue=6e-22,
Organism=Homo sapiens, GI187960098, Length=342, Percent_Identity=26.3157894736842, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI4557231, Length=342, Percent_Identity=26.3157894736842, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI4501859, Length=358, Percent_Identity=27.9329608938547, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI21361497, Length=357, Percent_Identity=26.6106442577031, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI4501857, Length=383, Percent_Identity=24.5430809399478, Blast_Score=92, Evalue=7e-19,
Organism=Homo sapiens, GI4557233, Length=278, Percent_Identity=26.6187050359712, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI7656849, Length=240, Percent_Identity=29.1666666666667, Blast_Score=80, Evalue=3e-15,
Organism=Escherichia coli, GI87081958, Length=306, Percent_Identity=28.4313725490196, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1786223, Length=319, Percent_Identity=25.705329153605, Blast_Score=81, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17538396, Length=391, Percent_Identity=28.3887468030691, Blast_Score=131, Evalue=8e-31,
Organism=Caenorhabditis elegans, GI17570075, Length=395, Percent_Identity=25.8227848101266, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17506239, Length=189, Percent_Identity=33.8624338624339, Blast_Score=95, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI32563615, Length=186, Percent_Identity=33.8709677419355, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17534899, Length=189, Percent_Identity=30.6878306878307, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17569725, Length=344, Percent_Identity=25, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI71990804, Length=207, Percent_Identity=28.5024154589372, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17508101, Length=188, Percent_Identity=30.8510638297872, Blast_Score=82, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI71985192, Length=199, Percent_Identity=31.6582914572864, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI71985184, Length=198, Percent_Identity=31.8181818181818, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17551932, Length=203, Percent_Identity=26.6009852216749, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71982178, Length=194, Percent_Identity=29.3814432989691, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17505929, Length=199, Percent_Identity=27.1356783919598, Blast_Score=68, Evalue=9e-12,
Organism=Drosophila melanogaster, GI21355753, Length=350, Percent_Identity=26, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24666513, Length=292, Percent_Identity=26.7123287671233, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI281363737, Length=358, Percent_Identity=27.0949720670391, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24646207, Length=273, Percent_Identity=28.5714285714286, Blast_Score=92, Evalue=7e-19,
Organism=Drosophila melanogaster, GI21356377, Length=278, Percent_Identity=26.978417266187, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24660351, Length=345, Percent_Identity=24.9275362318841, Blast_Score=84, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 41024; Mature: 40893

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: PS00072 ACYL_COA_DH_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGELEALCANDDDLAALRTSIREFLAADRAAHGWQPAVDCWLAAWDPEFSVRLAAAGFLG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEEECCCCCEEEEEEECEEE
LTIPTEYGGHGLGHLHRYVVTEELLAHGAPVAAHWIADRQVAPGLLTYGTEEQRRRLLPR
EECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHCCCHHHHHHHHHH
IAAGRLSSAIGMSEHGAGSDLAAVATRATEVDGGWRLDGTKVWTSGAHVADQVVVLARSA
HHHHHHHHHCCCCCCCCCCCHHHHHHHHEECCCCEEECCCEEECCCCHHHHHHHHEECCC
PVDPDHRHAGFSQFIVPTDAPGVTISPIVLMNGEHHFNEVLFDGVFVPHADVLGEIGNGW
CCCCCCCCCCCCEEEECCCCCCCEECEEEEECCCHHHHHHHHCCCCCCCHHHHHHHCCCH
HQVTAELGFERSGPERILSTATLVFEAVAALGRAGVDDRTAAEVGDLMARMVSLRQLSIS
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VARELTAGRDANTRAALVKDLGTRFEQKSVEIVAGLLTSLDEDAPEAERLRGLLATGRLH
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC
APLFTLRGGTNEVLRGVVARGLGVR
CCEEEECCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GELEALCANDDDLAALRTSIREFLAADRAAHGWQPAVDCWLAAWDPEFSVRLAAAGFLG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEEECCCCCEEEEEEECEEE
LTIPTEYGGHGLGHLHRYVVTEELLAHGAPVAAHWIADRQVAPGLLTYGTEEQRRRLLPR
EECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHCCCHHHHHHHHHH
IAAGRLSSAIGMSEHGAGSDLAAVATRATEVDGGWRLDGTKVWTSGAHVADQVVVLARSA
HHHHHHHHHCCCCCCCCCCCHHHHHHHHEECCCCEEECCCEEECCCCHHHHHHHHEECCC
PVDPDHRHAGFSQFIVPTDAPGVTISPIVLMNGEHHFNEVLFDGVFVPHADVLGEIGNGW
CCCCCCCCCCCCEEEECCCCCCCEECEEEEECCCHHHHHHHHCCCCCCCHHHHHHHCCCH
HQVTAELGFERSGPERILSTATLVFEAVAALGRAGVDDRTAAEVGDLMARMVSLRQLSIS
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VARELTAGRDANTRAALVKDLGTRFEQKSVEIVAGLLTSLDEDAPEAERLRGLLATGRLH
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC
APLFTLRGGTNEVLRGVVARGLGVR
CCEEEECCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]