| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is yxxB [H]
Identifier: 108797190
GI number: 108797190
Start: 230551
End: 231381
Strand: Reverse
Name: yxxB [H]
Synonym: Mmcs_0210
Alternate gene names: 108797190
Gene position: 231381-230551 (Counterclockwise)
Preceding gene: 108797192
Following gene: 108797186
Centisome position: 4.06
GC content: 69.8
Gene sequence:
>831_bases GTGACAGATGAGACCGGCGCCGCCGGTGCGGTTCGCACCGCCACGAACCACCGGGGGGCACAGGTTGCGGCACGCGTCGG CTATCTGATCAACGGCATCCTGCACCTGCTGATCGCCTACATCATCTTCCGTATCGCGATCGGCTCCGGACACGGCGACG CGGACCAGTCGGGTGCGCTGGCCGCGCTCGCCCAGACCAAGGGGGGATTCCTCGCGCTGTGGGGCGTCGCGATAGCGCTG GTGCCGTTGACGCTGTGGCGGCTGGCCGAGACGATCCTCGGCCTGCATCCCAGCGAGCACCACGATCCAGATCCGGATCC CGACGACTTCCTGATGGTCAACCGGCTCAAGGCGCTCGGGCTTGCGGTGGTCTACGCCGCGGTGGCGGCGATGGCCGTCC AATTCGCGCTCGGCAGCCGCCATTCCAGCGCGGAGCGGTCGGTGGGGCTGAGCATCTGGTTGATGCGCACCCCGGAGGGT AAGGCGGTGCTCGCGGTCATCGGTCTCGGCGTCACGGCGGTGGGCTGTTACTTTGCGTTCAAGGGGGCCTCGCGGCGGTT CCGCGACGACCTCAACATCTCCGGCGGGCGTGTGCTCACGGTCCTCGGGGCGTCGGGACACGTCGCGGAGGGCCTGGTGC TCGCGGTCGCCGGGGTGCTGGTTGTCGTCGCGTCGGTGCGGGCCGATCCGTCGAAGGCCACCGGACTCGACGGCGCGGTC AAGGCGCTCGGGCAGATGCCGTTCGGTTCGGTGCTGATCGGGGCGGCCGCGGCGGGTTTCGCCGCCTACGGTCTGTACAG CTTCGCGCTCACCCGCTACGCGCGGATGTGA
Upstream 100 bases:
>100_bases CGACGAGCGGATGGCTCACCTCAAGGGCGCCGGGGAGAAGCTGAAGGACGCCTTCCGGTCCCGTCGCCGGCCGCGGGGCT ACTGAGCGGATCCTCCCTCG
Downstream 100 bases:
>100_bases GCGTCAGTTCGGTATCACGCCCTGACCGTCGTGTTCGGCGACGGTCTCGACGCGGTGCGCACCGGGTGACTCGGGCAGTT CGTGCCGTCCGCCGGCCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MTDETGAAGAVRTATNHRGAQVAARVGYLINGILHLLIAYIIFRIAIGSGHGDADQSGALAALAQTKGGFLALWGVAIAL VPLTLWRLAETILGLHPSEHHDPDPDPDDFLMVNRLKALGLAVVYAAVAAMAVQFALGSRHSSAERSVGLSIWLMRTPEG KAVLAVIGLGVTAVGCYFAFKGASRRFRDDLNISGGRVLTVLGASGHVAEGLVLAVAGVLVVVASVRADPSKATGLDGAV KALGQMPFGSVLIGAAAAGFAAYGLYSFALTRYARM
Sequences:
>Translated_276_residues MTDETGAAGAVRTATNHRGAQVAARVGYLINGILHLLIAYIIFRIAIGSGHGDADQSGALAALAQTKGGFLALWGVAIAL VPLTLWRLAETILGLHPSEHHDPDPDPDDFLMVNRLKALGLAVVYAAVAAMAVQFALGSRHSSAERSVGLSIWLMRTPEG KAVLAVIGLGVTAVGCYFAFKGASRRFRDDLNISGGRVLTVLGASGHVAEGLVLAVAGVLVVVASVRADPSKATGLDGAV KALGQMPFGSVLIGAAAAGFAAYGLYSFALTRYARM >Mature_275_residues TDETGAAGAVRTATNHRGAQVAARVGYLINGILHLLIAYIIFRIAIGSGHGDADQSGALAALAQTKGGFLALWGVAIALV PLTLWRLAETILGLHPSEHHDPDPDPDDFLMVNRLKALGLAVVYAAVAAMAVQFALGSRHSSAERSVGLSIWLMRTPEGK AVLAVIGLGVTAVGCYFAFKGASRRFRDDLNISGGRVLTVLGASGHVAEGLVLAVAGVLVVVASVRADPSKATGLDGAVK ALGQMPFGSVLIGAAAAGFAAYGLYSFALTRYARM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009597 [H]
Pfam domain/function: PF06724 DUF1206 [H]
EC number: NA
Molecular weight: Translated: 28413; Mature: 28282
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDETGAAGAVRTATNHRGAQVAARVGYLINGILHLLIAYIIFRIAIGSGHGDADQSGAL CCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH AALAQTKGGFLALWGVAIALVPLTLWRLAETILGLHPSEHHDPDPDPDDFLMVNRLKALG HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH LAVVYAAVAAMAVQFALGSRHSSAERSVGLSIWLMRTPEGKAVLAVIGLGVTAVGCYFAF HHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHH KGASRRFRDDLNISGGRVLTVLGASGHVAEGLVLAVAGVLVVVASVRADPSKATGLDGAV HCCCHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH KALGQMPFGSVLIGAAAAGFAAYGLYSFALTRYARM HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TDETGAAGAVRTATNHRGAQVAARVGYLINGILHLLIAYIIFRIAIGSGHGDADQSGAL CCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH AALAQTKGGFLALWGVAIALVPLTLWRLAETILGLHPSEHHDPDPDPDDFLMVNRLKALG HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH LAVVYAAVAAMAVQFALGSRHSSAERSVGLSIWLMRTPEGKAVLAVIGLGVTAVGCYFAF HHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHH KGASRRFRDDLNISGGRVLTVLGASGHVAEGLVLAVAGVLVVVASVRADPSKATGLDGAV HCCCHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH KALGQMPFGSVLIGAAAAGFAAYGLYSFALTRYARM HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377; 8550462 [H]