Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797188
Identifier: 108797188
GI number: 108797188
Start: 229661
End: 230263
Strand: Direct
Name: 108797188
Synonym: Mmcs_0208
Alternate gene names: NA
Gene position: 229661-230263 (Clockwise)
Preceding gene: 108797187
Following gene: 108797189
Centisome position: 4.03
GC content: 72.97
Gene sequence:
>603_bases GTGAGACACGCATTCACCGGCCACATCGCCGGATTCGGAACCGACGCGGGGGTCCGCGTCGTCGTCGGCTGCTGGCAGAC GTCGCCCTTCGGGGCGTTCACCGACGTCATGGTGCAGCAACCCGACGAACAGCGCGTGCTGCTGGCCCCCGACCGCGCGG TCGCCGACTTCGTCGCCGCCACCTACCACTTCGACCGCGTCGAGGTCGGGCCGGTGGCCGCGACGCTCGAGCCCGACCGA CTGACCGTGCACAGTGCGGTACTCGACGTGAAGGTGTCGATCGGCGGGCCCGCACCGCTGGACCGGCTGCTGCGGCTGGT CCCCGCCCGGCTGGCGACAGCACCGTGGTGGCTGCGGGCCGTCGACCCGGTGGCGTCGCGCCTCGTGCGCGGCGTCCACA CCGCGGGCACGGCGGGCCACGGCCGCAGGGAGTTCTACGGGGTTCGGCGCTCCCGCCGCATCACCGCGCTGGCAGGCCGC TACCGGGACGTGGATCTGGGTGGCCTGCAACCACTTCGGCCTCCGGTGAGCTTCGGATTCGCCTCCGCGCCTGCCGCGCC ACAGCTGGTCGCGGTCACCACGACCATCATCGACGCCGGCTGA
Upstream 100 bases:
>100_bases CGGTGACACACGCGCTGCCAAGGCGTCCGACGACAAAGGTGACGGCAACGAGGGCGGCGACGACGAATAGCGGGTCCGCA CCAGGGCGGGGCGGTGGCCG
Downstream 100 bases:
>100_bases AGTGTTTTTGGAAGGCCGGTCGCGGGCACAGTGACGGCATGGACACGGTGACTCGACTACGGCACGCCCAGCAGCGACTC CTCAAGGCGCAGCGCCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MRHAFTGHIAGFGTDAGVRVVVGCWQTSPFGAFTDVMVQQPDEQRVLLAPDRAVADFVAATYHFDRVEVGPVAATLEPDR LTVHSAVLDVKVSIGGPAPLDRLLRLVPARLATAPWWLRAVDPVASRLVRGVHTAGTAGHGRREFYGVRRSRRITALAGR YRDVDLGGLQPLRPPVSFGFASAPAAPQLVAVTTTIIDAG
Sequences:
>Translated_200_residues MRHAFTGHIAGFGTDAGVRVVVGCWQTSPFGAFTDVMVQQPDEQRVLLAPDRAVADFVAATYHFDRVEVGPVAATLEPDR LTVHSAVLDVKVSIGGPAPLDRLLRLVPARLATAPWWLRAVDPVASRLVRGVHTAGTAGHGRREFYGVRRSRRITALAGR YRDVDLGGLQPLRPPVSFGFASAPAAPQLVAVTTTIIDAG >Mature_200_residues MRHAFTGHIAGFGTDAGVRVVVGCWQTSPFGAFTDVMVQQPDEQRVLLAPDRAVADFVAATYHFDRVEVGPVAATLEPDR LTVHSAVLDVKVSIGGPAPLDRLLRLVPARLATAPWWLRAVDPVASRLVRGVHTAGTAGHGRREFYGVRRSRRITALAGR YRDVDLGGLQPLRPPVSFGFASAPAAPQLVAVTTTIIDAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21392; Mature: 21392
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHAFTGHIAGFGTDAGVRVVVGCWQTSPFGAFTDVMVQQPDEQRVLLAPDRAVADFVAA CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCEEEECCCHHHHHHHHH TYHFDRVEVGPVAATLEPDRLTVHSAVLDVKVSIGGPAPLDRLLRLVPARLATAPWWLRA HHCCCCEEECCEEEEECCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHH VDPVASRLVRGVHTAGTAGHGRREFYGVRRSRRITALAGRYRDVDLGGLQPLRPPVSFGF HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEHHCCCCCCCCCCCCCCCCCCCCCC ASAPAAPQLVAVTTTIIDAG CCCCCCCEEEEEEEEEEECC >Mature Secondary Structure MRHAFTGHIAGFGTDAGVRVVVGCWQTSPFGAFTDVMVQQPDEQRVLLAPDRAVADFVAA CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCEEEECCCHHHHHHHHH TYHFDRVEVGPVAATLEPDRLTVHSAVLDVKVSIGGPAPLDRLLRLVPARLATAPWWLRA HHCCCCEEECCEEEEECCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHH VDPVASRLVRGVHTAGTAGHGRREFYGVRRSRRITALAGRYRDVDLGGLQPLRPPVSFGF HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEHHCCCCCCCCCCCCCCCCCCCCCC ASAPAAPQLVAVTTTIIDAG CCCCCCCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA