| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797107
Identifier: 108797107
GI number: 108797107
Start: 142797
End: 143750
Strand: Direct
Name: 108797107
Synonym: Mmcs_0127
Alternate gene names: NA
Gene position: 142797-143750 (Clockwise)
Preceding gene: 108797106
Following gene: 108797108
Centisome position: 2.5
GC content: 69.5
Gene sequence:
>954_bases GTGGAAGATCAGCCAGCTGATTCAGGTGATCTGACCACGGATCCCGCCGGGACGGGATCTGCCGAACCCAAGCGCGGGCG GCGGCTGCCGTGGCGGCGCGCCAAGAAGGCTGCGGCCGAATCTGATTCGCCGGGCGTCGCCGCCGAGGAGCCGGCGACGC CTGAGGAGCCCTCGACGCCTGACGAGCAGGCACCACGCATGCCGACCGGCAAGGCGCGCAGGTCGCCGAAGCCGGTCAGC GCGACGGACACCGAGCCCGAGCCCGAGCCCGAGCCGGAGGTCGCGGTCGAGAAAGAGCCGGACGCCGAGCCCGAGGGCGA GGCTCAGGCCGCCGAGCCCGAGGTCGAGGCCGAAACCGCCGACGGCGCAGGCGAATCCGACGCCGCTGGTGAATCCGAAG GCGAGCCGGAACCGGAACCGGTACTCGTCCCGCACCGACCGGCGGGCAGGCGCCTGTTGATCGCCGCCGCCGCGGCGTCG GTCGTCTTCGTCGGGGCGGGCGCCTTCGCCGGCGCGATGCTGCAGCCGTACCTGGCCGACCGGGCCGAGGTGGACACCAA GCTGAACATCGCCCGTACCGCGACCGAGGCGATCACCACGCTGTGGAGCTACACCCCCGAAGACATGGCGACCCTGCCCG ACCGCTCATCACGTTTCCTCACCGGTGATTTCGCGACCGAGTACCGCCGCTACATCGACGCCATCGTCTCGACGAACGAA CAGGCGAAGGTGACGAACACGACCCAGGTGATGGGCACCGCCGTCGAGAGCCTCACACCGACAGAGGCGACCGCCCTCGT CTACACGAACTCCGTGTCCACCAGCCCGGTGAGCAAGAACGTGCCGTCGCTGCGCTACCTGTCCTACCGGCTGACGATGG AGCGTGACGGCGCTGACTGGCTGATCACCGGAATGAACGCGGTGACCAAGCTGGATCTCACCCCGCAGCTGTAA
Upstream 100 bases:
>100_bases TGCTGGTGGCCACCACGACGACATCCAAGACACCGGACGGCAAGAAGACGATCGAGAGCGGAAACCGTTGGGTGGCAACG ACGACCCAGGAGGGCCAGCA
Downstream 100 bases:
>100_bases CGATCATCTCCGGGCCATGGCCGTTCGTTCACCGGTCTCGAACCGGTTGACCGTCACCGCATTACTGCTGCTGACGTTCG CGACGGGGTTGATCGACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Protein
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MEDQPADSGDLTTDPAGTGSAEPKRGRRLPWRRAKKAAAESDSPGVAAEEPATPEEPSTPDEQAPRMPTGKARRSPKPVS ATDTEPEPEPEPEVAVEKEPDAEPEGEAQAAEPEVEAETADGAGESDAAGESEGEPEPEPVLVPHRPAGRRLLIAAAAAS VVFVGAGAFAGAMLQPYLADRAEVDTKLNIARTATEAITTLWSYTPEDMATLPDRSSRFLTGDFATEYRRYIDAIVSTNE QAKVTNTTQVMGTAVESLTPTEATALVYTNSVSTSPVSKNVPSLRYLSYRLTMERDGADWLITGMNAVTKLDLTPQL
Sequences:
>Translated_317_residues MEDQPADSGDLTTDPAGTGSAEPKRGRRLPWRRAKKAAAESDSPGVAAEEPATPEEPSTPDEQAPRMPTGKARRSPKPVS ATDTEPEPEPEPEVAVEKEPDAEPEGEAQAAEPEVEAETADGAGESDAAGESEGEPEPEPVLVPHRPAGRRLLIAAAAAS VVFVGAGAFAGAMLQPYLADRAEVDTKLNIARTATEAITTLWSYTPEDMATLPDRSSRFLTGDFATEYRRYIDAIVSTNE QAKVTNTTQVMGTAVESLTPTEATALVYTNSVSTSPVSKNVPSLRYLSYRLTMERDGADWLITGMNAVTKLDLTPQL >Mature_317_residues MEDQPADSGDLTTDPAGTGSAEPKRGRRLPWRRAKKAAAESDSPGVAAEEPATPEEPSTPDEQAPRMPTGKARRSPKPVS ATDTEPEPEPEPEVAVEKEPDAEPEGEAQAAEPEVEAETADGAGESDAAGESEGEPEPEPVLVPHRPAGRRLLIAAAAAS VVFVGAGAFAGAMLQPYLADRAEVDTKLNIARTATEAITTLWSYTPEDMATLPDRSSRFLTGDFATEYRRYIDAIVSTNE QAKVTNTTQVMGTAVESLTPTEATALVYTNSVSTSPVSKNVPSLRYLSYRLTMERDGADWLITGMNAVTKLDLTPQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33706; Mature: 33706
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDQPADSGDLTTDPAGTGSAEPKRGRRLPWRRAKKAAAESDSPGVAAEEPATPEEPSTP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC DEQAPRMPTGKARRSPKPVSATDTEPEPEPEPEVAVEKEPDAEPEGEAQAAEPEVEAETA CHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC DGAGESDAAGESEGEPEPEPVLVPHRPAGRRLLIAAAAASVVFVGAGAFAGAMLQPYLAD CCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEHHHEEEEEECCHHHHHHHHHHHHH RAEVDTKLNIARTATEAITTLWSYTPEDMATLPDRSSRFLTGDFATEYRRYIDAIVSTNE HHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEECHHHHHHHHHHHHHHCCCC QAKVTNTTQVMGTAVESLTPTEATALVYTNSVSTSPVSKNVPSLRYLSYRLTMERDGADW CCEECCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCCCE LITGMNAVTKLDLTPQL EEECCCEEEEECCCCCC >Mature Secondary Structure MEDQPADSGDLTTDPAGTGSAEPKRGRRLPWRRAKKAAAESDSPGVAAEEPATPEEPSTP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC DEQAPRMPTGKARRSPKPVSATDTEPEPEPEPEVAVEKEPDAEPEGEAQAAEPEVEAETA CHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC DGAGESDAAGESEGEPEPEPVLVPHRPAGRRLLIAAAAASVVFVGAGAFAGAMLQPYLAD CCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEHHHEEEEEECCHHHHHHHHHHHHH RAEVDTKLNIARTATEAITTLWSYTPEDMATLPDRSSRFLTGDFATEYRRYIDAIVSTNE HHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEECHHHHHHHHHHHHHHCCCC QAKVTNTTQVMGTAVESLTPTEATALVYTNSVSTSPVSKNVPSLRYLSYRLTMERDGADW CCEECCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCCCE LITGMNAVTKLDLTPQL EEECCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA