| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is tauA [H]
Identifier: 108797086
GI number: 108797086
Start: 120674
End: 121699
Strand: Direct
Name: tauA [H]
Synonym: Mmcs_0105
Alternate gene names: 108797086
Gene position: 120674-121699 (Clockwise)
Preceding gene: 108797085
Following gene: 108797087
Centisome position: 2.12
GC content: 67.25
Gene sequence:
>1026_bases ATGAGACTCAAAGCCCTTGCCGCCGTGGCGGTCGCGATGCTGGCGGTGGCCGGCTGCTCGGTCGACACGTCCGGTCAGGA TGCCGGGAAGCAGACGATTCGCATTGCCTACCAGAGCTTCCCGAGCGGCGACCTGATCGTGAAGAACAACCGCTGGCTCG AGGATGCGCTGCCGGACTACAACATCAAGTGGACGAAGTTCGACTCCGGCGCCGACGTCAACACCGCGTTCATCGCCAAG GAGGTCGATTTCGGCGCGCTGGGTTCGAGCCCCGTGGCCCGTGGCCTGTCGGCCCCGCTGAACATCCCGTACAAGGTGGC GTTCGTGCTCGACGTCGCAGGCGACAACGAGGCGCTGGTGGCGCGCAACGGAAGCGGCGTCAACACGATCGCCGATCTGC GGGGCAAGCGCGTCGGCACGCCGTTCGCCTCGACCGCGCACTACAGCCTGCTCGCCGCGCTGGACCAGAACGGGTTGTCG CCCAACGATGTTCAGCTCGTGGACCTGCAGCCGCAGGCCATCCTGGCGGCGTTCGACCGCGGTGACATCGACGCCGGGTA CTCGTGGTTGCCGACCCTGGATCAGCTTCGCCGCAACGGCAAGGACCTCATCACCAGCCGACAGCTGGCCCGCGACGGTA AGCCCACGCTCGACCTGGCCGTGGTGGCCGACGAGTTCGCCGAAGCCCATCCGGACGTGGTCGACATCTGGCGTCAGCAG GAGGCCCGCGCACTCACCGTCATCAAGGACGACCCCGACGCCGCCGCCAAGGCCATCGCCGCCGAAATCGGGTTGACGCC CGAGGAGGTCGCCGGACAGCTCACCCAGGGCGTGTACCTGACACCCGCGGAAGTGGCCTCGCCGGAGTGGCTGGGCTCCG AGGGTGCGCCGGGCAACATCGCGGTCAACCTGGAGAGCGCGTCGCAGTTCCTCGCCGAGCAGAAGCAGATCCCGGCCGCC GCACCGTTGAAGACCTTTCAGGATGCGATCTACACCAAGGGTCTACCCGGTGCCATCACCCAGTGA
Upstream 100 bases:
>100_bases CGGCATCTTCGCCATCGGCATCTCGGGTCTGATCATCGACGGTCTGTTGCGCACGATCGAACGTCGCAGTACCCCCTGGA TTGGAAAGGTCTAGAACGAT
Downstream 100 bases:
>100_bases CGGGGCCATCCGGCTGCGCGGTGTCTCCCACCGGTACGGCCGCGGCGGTCAGGAGGTCACCGCGGTCGGGCCCGTCGACC TGACCGTCGAACCCGGGGCG
Product: glycine betaine ABC transporter substrate-binding protein
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: Sulfate starvation-induced protein 1; SSI1 [H]
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MRLKALAAVAVAMLAVAGCSVDTSGQDAGKQTIRIAYQSFPSGDLIVKNNRWLEDALPDYNIKWTKFDSGADVNTAFIAK EVDFGALGSSPVARGLSAPLNIPYKVAFVLDVAGDNEALVARNGSGVNTIADLRGKRVGTPFASTAHYSLLAALDQNGLS PNDVQLVDLQPQAILAAFDRGDIDAGYSWLPTLDQLRRNGKDLITSRQLARDGKPTLDLAVVADEFAEAHPDVVDIWRQQ EARALTVIKDDPDAAAKAIAAEIGLTPEEVAGQLTQGVYLTPAEVASPEWLGSEGAPGNIAVNLESASQFLAEQKQIPAA APLKTFQDAIYTKGLPGAITQ
Sequences:
>Translated_341_residues MRLKALAAVAVAMLAVAGCSVDTSGQDAGKQTIRIAYQSFPSGDLIVKNNRWLEDALPDYNIKWTKFDSGADVNTAFIAK EVDFGALGSSPVARGLSAPLNIPYKVAFVLDVAGDNEALVARNGSGVNTIADLRGKRVGTPFASTAHYSLLAALDQNGLS PNDVQLVDLQPQAILAAFDRGDIDAGYSWLPTLDQLRRNGKDLITSRQLARDGKPTLDLAVVADEFAEAHPDVVDIWRQQ EARALTVIKDDPDAAAKAIAAEIGLTPEEVAGQLTQGVYLTPAEVASPEWLGSEGAPGNIAVNLESASQFLAEQKQIPAA APLKTFQDAIYTKGLPGAITQ >Mature_341_residues MRLKALAAVAVAMLAVAGCSVDTSGQDAGKQTIRIAYQSFPSGDLIVKNNRWLEDALPDYNIKWTKFDSGADVNTAFIAK EVDFGALGSSPVARGLSAPLNIPYKVAFVLDVAGDNEALVARNGSGVNTIADLRGKRVGTPFASTAHYSLLAALDQNGLS PNDVQLVDLQPQAILAAFDRGDIDAGYSWLPTLDQLRRNGKDLITSRQLARDGKPTLDLAVVADEFAEAHPDVVDIWRQQ EARALTVIKDDPDAAAKAIAAEIGLTPEEVAGQLTQGVYLTPAEVASPEWLGSEGAPGNIAVNLESASQFLAEQKQIPAA APLKTFQDAIYTKGLPGAITQ
Specific function: Part of a binding-protein-dependent transport system for taurine [H]
COG id: COG4521
COG function: function code P; ABC-type taurine transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
Organism=Escherichia coli, GI87081727, Length=267, Percent_Identity=40.0749063670412, Blast_Score=165, Evalue=5e-42, Organism=Escherichia coli, GI87081803, Length=184, Percent_Identity=30.9782608695652, Blast_Score=79, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007210 - InterPro: IPR001638 - InterPro: IPR010068 [H]
Pfam domain/function: PF04069 OpuAC [H]
EC number: NA
Molecular weight: Translated: 36061; Mature: 36061
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLKALAAVAVAMLAVAGCSVDTSGQDAGKQTIRIAYQSFPSGDLIVKNNRWLEDALPDY CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCHHHCCCCC NIKWTKFDSGADVNTAFIAKEVDFGALGSSPVARGLSAPLNIPYKVAFVLDVAGDNEALV CEEEEEECCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCCCCEEEEEEEEECCCCCEEE ARNGSGVNTIADLRGKRVGTPFASTAHYSLLAALDQNGLSPNDVQLVDLQPQAILAAFDR EECCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCHHHEEECCC GDIDAGYSWLPTLDQLRRNGKDLITSRQLARDGKPTLDLAVVADEFAEAHPDVVDIWRQQ CCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEEHHHHHCCCCHHHHHHHC EARALTVIKDDPDAAAKAIAAEIGLTPEEVAGQLTQGVYLTPAEVASPEWLGSEGAPGNI CCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHCCEEECHHHHCCCCCCCCCCCCCEE AVNLESASQFLAEQKQIPAAAPLKTFQDAIYTKGLPGAITQ EEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRLKALAAVAVAMLAVAGCSVDTSGQDAGKQTIRIAYQSFPSGDLIVKNNRWLEDALPDY CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCHHHCCCCC NIKWTKFDSGADVNTAFIAKEVDFGALGSSPVARGLSAPLNIPYKVAFVLDVAGDNEALV CEEEEEECCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCCCCEEEEEEEEECCCCCEEE ARNGSGVNTIADLRGKRVGTPFASTAHYSLLAALDQNGLSPNDVQLVDLQPQAILAAFDR EECCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCHHHEEECCC GDIDAGYSWLPTLDQLRRNGKDLITSRQLARDGKPTLDLAVVADEFAEAHPDVVDIWRQQ CCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEEHHHHHCCCCHHHHHHHC EARALTVIKDDPDAAAKAIAAEIGLTPEEVAGQLTQGVYLTPAEVASPEWLGSEGAPGNI CCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHCCEEECHHHHCCCCCCCCCCCCCEE AVNLESASQFLAEQKQIPAAAPLKTFQDAIYTKGLPGAITQ EEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503; 8774726 [H]