| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is 108763975
Identifier: 108763975
GI number: 108763975
Start: 4589190
End: 4590233
Strand: Reverse
Name: 108763975
Synonym: MXAN_3820
Alternate gene names: NA
Gene position: 4590233-4589190 (Counterclockwise)
Preceding gene: 108759420
Following gene: 108763350
Centisome position: 50.22
GC content: 67.53
Gene sequence:
>1044_bases ATGAACACGCTTCCCTCCGCCGAAAGGCACGACTTTCCCGCGGGCGACGGCGTGCCGTTGCAGCTCACGCGTTACCAGGG CGGCGCGAAGGGGCCTGTCCTCCTCGTCCATGGCGCGGGGGTGTGGAGCGGCATGTTCATGCTTCCCACGGTGCGGGAGA ACTTCGTGCAGCACCTGGTGCGCCACGGCTACGACACCTGGCTTCTGGACTGGCGCGCCAGCGTGGAGCTGCCGCTGCGG CAGTTCACGCTGGATGAGGCCGCCCGCCACGACATGCCCGCCGCCGTCCGACTGGTCCGCGAGCACAGCGGCGCGGACTC CGTGCAGGCGGTGGTGCACTGCGCGGGCTCGGCGACGTTCTTCATGGCGATGGCGGCGGGGCTGCTTCCGGACGTCCAGA GCGTGGTCGCCTCGCAGGTGGCGCTGCATCACATCGTCCCGCCTTCAACGCAGCTCAAGGCGATGCTGCGGTTGCCGGAC GTGCTGGACATCACCCGCGACTACCTGACGCCGGACGAGGACCCGAGCAGCCCCTTGTTCCAGGCCGCCTTCGGCGCCTT CGTGGACCTGTGGCGTCATGAATGCGACAGCACCGTCTGCCGCCGTCTGACGTTCATGTACGGGCAGCTCTTCCGGCACG CGCGCATCAATCGGGAGACGCATGACCGGCTCGACGAGCAGTTCGGCCCTTGCAACATGCTGACGTTCCGTCATCTGGCG CAGATGGCCCGCTCGGGCTACGCGGTGGGCTTCGACCATGGCCGGGAGGAGAACCTCCGGCGCTATGGCCGTGAGCGGCC GCCGTCGTACCTGCGCGCGGAGCACCTCAAGCGTCCCATCACCTTCGTGTCCGGAGAGCAGAATGGCACGTACATGCCCG CGTCCACGGAGCTCACCTACGAGTGGCTGCGCGAAGAGAACGGTGCGTCGTATTACCGGCGGAAGGTTCTGGCGGGGTAC GGCCACCTGGACACCTTCATGGGAAGCACTGCGTCGCAGGATACGTATCCGGTGATACGCGACGCGCTGGAGGCCATGGC CTGA
Upstream 100 bases:
>100_bases CAGCCATCGGCTTCCACCCCGTGATGACCATCAGCGCGGTGGCCGAGCGCATCGCCGAGGCCGTGGTGCACGGATTCTCA TCCCATTCGAGGAGCGCTTC
Downstream 100 bases:
>100_bases GCGGATACGGCGCCCTGCGCACTCGCGCCGCTACGCGCCTTCGGCCACCGCGGGCGGTGCCTCGCCCGGTGCATCCGAGA CAGACGTCTCATCCCATCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Glucose-Methanol-Choline Oxidoreductase; AB-Hydrolase Associated Lipase Region; Cholesterol Oxidase; Choline Dehydrogenase-Like Flavoprotein
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MNTLPSAERHDFPAGDGVPLQLTRYQGGAKGPVLLVHGAGVWSGMFMLPTVRENFVQHLVRHGYDTWLLDWRASVELPLR QFTLDEAARHDMPAAVRLVREHSGADSVQAVVHCAGSATFFMAMAAGLLPDVQSVVASQVALHHIVPPSTQLKAMLRLPD VLDITRDYLTPDEDPSSPLFQAAFGAFVDLWRHECDSTVCRRLTFMYGQLFRHARINRETHDRLDEQFGPCNMLTFRHLA QMARSGYAVGFDHGREENLRRYGRERPPSYLRAEHLKRPITFVSGEQNGTYMPASTELTYEWLREENGASYYRRKVLAGY GHLDTFMGSTASQDTYPVIRDALEAMA
Sequences:
>Translated_347_residues MNTLPSAERHDFPAGDGVPLQLTRYQGGAKGPVLLVHGAGVWSGMFMLPTVRENFVQHLVRHGYDTWLLDWRASVELPLR QFTLDEAARHDMPAAVRLVREHSGADSVQAVVHCAGSATFFMAMAAGLLPDVQSVVASQVALHHIVPPSTQLKAMLRLPD VLDITRDYLTPDEDPSSPLFQAAFGAFVDLWRHECDSTVCRRLTFMYGQLFRHARINRETHDRLDEQFGPCNMLTFRHLA QMARSGYAVGFDHGREENLRRYGRERPPSYLRAEHLKRPITFVSGEQNGTYMPASTELTYEWLREENGASYYRRKVLAGY GHLDTFMGSTASQDTYPVIRDALEAMA >Mature_347_residues MNTLPSAERHDFPAGDGVPLQLTRYQGGAKGPVLLVHGAGVWSGMFMLPTVRENFVQHLVRHGYDTWLLDWRASVELPLR QFTLDEAARHDMPAAVRLVREHSGADSVQAVVHCAGSATFFMAMAAGLLPDVQSVVASQVALHHIVPPSTQLKAMLRLPD VLDITRDYLTPDEDPSSPLFQAAFGAFVDLWRHECDSTVCRRLTFMYGQLFRHARINRETHDRLDEQFGPCNMLTFRHLA QMARSGYAVGFDHGREENLRRYGRERPPSYLRAEHLKRPITFVSGEQNGTYMPASTELTYEWLREENGASYYRRKVLAGY GHLDTFMGSTASQDTYPVIRDALEAMA
Specific function: Unknown
COG id: COG2303
COG function: function code E; Choline dehydrogenase and related flavoproteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39135; Mature: 39135
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLPSAERHDFPAGDGVPLQLTRYQGGAKGPVLLVHGAGVWSGMFMLPTVRENFVQHLV CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCHHHCHHHHHHHHHHHHHHHH RHGYDTWLLDWRASVELPLRQFTLDEAARHDMPAAVRLVREHSGADSVQAVVHCAGSATF HCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCHHHH FMAMAAGLLPDVQSVVASQVALHHIVPPSTQLKAMLRLPDVLDITRDYLTPDEDPSSPLF HHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHH QAAFGAFVDLWRHECDSTVCRRLTFMYGQLFRHARINRETHDRLDEQFGPCNMLTFRHLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHH QMARSGYAVGFDHGREENLRRYGRERPPSYLRAEHLKRPITFVSGEQNGTYMPASTELTY HHHHCCCEECCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHH EWLREENGASYYRRKVLAGYGHLDTFMGSTASQDTYPVIRDALEAMA HHHHCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MNTLPSAERHDFPAGDGVPLQLTRYQGGAKGPVLLVHGAGVWSGMFMLPTVRENFVQHLV CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCHHHCHHHHHHHHHHHHHHHH RHGYDTWLLDWRASVELPLRQFTLDEAARHDMPAAVRLVREHSGADSVQAVVHCAGSATF HCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCHHHH FMAMAAGLLPDVQSVVASQVALHHIVPPSTQLKAMLRLPDVLDITRDYLTPDEDPSSPLF HHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHH QAAFGAFVDLWRHECDSTVCRRLTFMYGQLFRHARINRETHDRLDEQFGPCNMLTFRHLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHH QMARSGYAVGFDHGREENLRRYGRERPPSYLRAEHLKRPITFVSGEQNGTYMPASTELTY HHHHCCCEECCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHH EWLREENGASYYRRKVLAGYGHLDTFMGSTASQDTYPVIRDALEAMA HHHHCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA