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The map label for this gene is glgB

Identifier: 108763698

GI number: 108763698

Start: 4392545

End: 4394749

Strand: Reverse

Name: glgB

Synonym: MXAN_3682

Alternate gene names: 108763698

Gene position: 4394749-4392545 (Counterclockwise)

Preceding gene: 108758925

Following gene: 108760302

Centisome position: 48.08

GC content: 67.94

Gene sequence:

>2205_bases
GTGAGGAAGCCAGCCGACAAGGCCCAGGTCGACGCGGAGCTTCAACGCGTCGTGGAACTGAGGCACCCGGAGCCGCACGC
TGTCCTGGGTATCCACCCGGATGGGGATGGCGTGGTGATTCGCGCCTTCCGCCCGGACGCCGTGGCCATCCACGTGCTGC
CGGAATCCGGCGGTCGCGTCGCGATGACGCACCGGCCGGGCGGCGTCTACGAGGCCCGCATCAACGGCAAGGACCAGACG
TTCAACTATTTGCTGGAAGTGGAGTACCCCGGCAAGCGCGTCTTCACGCTTCGCGACCCGTACAGCTTCCTCCCCACCCT
GGGGGAGATGGACCTGTACTACGCCGGTGAAGGCCGCCACGAGCGCCTCTGGGAGCGCATGGGCGCGCACCTGCTGCACC
ACCACGGCGTGCGCGGCACCTCGTTCGCGGTGTGGGCCCCCACGGCGGCGGGCGTGTCCGTGGTCGGTGACTTCAACGGC
TGGGACGGCCGGCTGCACTCCATGCGCCGCATGGGCTCCTCCGGCATCTGGGAGCTCTTCGTCCCCGAGGTGGGCGAAGG
CACCCGGTACAAGTTCGAGATTCGCCCCGGCCAGGGCGGGCCCAACGTCCTCAAGGCGGACCCGTTCGCCTTCCGTACCG
AGGTCCCCCCCGCCACGGCCTCCGTGGTGCACGACCTGGCGCGCTACACCTGGGGCGACGCGGCGTGGCTGGAGCAACGC
GCCCAGCGGCGGGACGTCCATCACCAACCGTGGAGCGTGTACGAGGTCCACCTGGGCAGTTGGCGCCGGGTGGTGGAAGA
CGGCGACCGGCCCATGACGTACCGGGAGCTGGCCCCGGCGCTGGCCGAGTACATCAAGTTCACCGGCTTCACCCACATCG
AGCTGCTCCCCGTGGCCGAGCACCCCTACGGTGGCTCCTGGGGCTACCAGGTTGGCGGCTACTACGCTCCCACGGCGCGC
TTCGGCCACCCGGATGACCTGCGCTTCTTCATCGACCACATGCACCAGGAAGGCATCGGGGTGCTCGTGGACTGGGTGCC
CGGACACTTCCCGCGCGACCTGCACGCCCTGGGACAGTTCGACGGCACGGCCCTGTATGAGCATGCCGACCCGCGCAAGG
GCGCGCAGCCGGACTGGGGCACGCTGGTCTTCAACTTCGGCCGCAATGAGGTGCGCAACTTCCTCATCGCCAACGCGTTG
TTCTGGATCGAGGAGTACCACATCGACGGACTGCGCGTGGACGCGGTGGCGTCGATGCTCTACCTCGACTACAGCCGCAA
GCAGGGCGAGTGGATTCCCAACCGCTGGGGCGGCCGGGAGAACGAAGAGGCCATCCATTTCCTGCGCGAGCTGAACGAAA
CGGTCCACCGCAAGCACCCGGGCGTCGTCGTCATCGCCGAGGAGTCCACGGCCTGGCCCAAGGTGTCCGCGCCGGTGTCC
GAAGGCGGCCTGGGGTTCGACTACAAGTGGAACATGGGGTGGATGCACGACACGCTGTCGTACTTCTCCAAGGACCCCAT
CTACCGGCAGTACCACCACAACCAGCTCACCTTCGGCCTGCTGTACGCGTTCAGCGAGCAGTTCATGCTGCCGCTGAGCC
ATGACGAGGTGGTGCACGGCAAGGGCAGCCTGTACGGGCGCATGCCGGGCGACCCGTGGCAGAAGCGCGCCAACCTGCGC
GCCCTGTTCGCGTGGATGTGGGCGCACCCGGGCAAGAAGCTCGTCTTCATGGGCGGCGAGTTCGGCCAGCCCGCCGAGTG
GAACCACGACAAGAGCCTGGACTGGCACCTGACGCACGACCCGGGGCACCACGGCATCCTTCAACTGGTCTCGGACCTGA
ACCGCATCTACCGGGACATGCCCGCGCTTCACGACGCGGATGGCGAGCCCATGGGCTTCCAGTGGCTCCAGCCGGACTCG
GCCGCGTACAACGTGTTCGCGTTCGTGCGGCGCGCGCGTCAGCCAGGACGGCATGTGGTGTGTATCGCCAACCTGTCGCC
AACGGTGCGTGAGAACTACCGCGTGGGCTTCCCGTTCCAGGGCCGCTACGTGGAGTTGCTCAACACGGACGCCGAGCAGT
ACGGCGGCTCCAACCTGGGCAACATGGGCCAGATTCACACCGAGCCCACGGGCTGGGATGGCCAGCCGGCTTCGGCCACC
CTCACCCTGCCCCCGTTGTCCGTGTTGTGGTTCACGCCGGGCTGA

Upstream 100 bases:

>100_bases
AGCTGGAGAAACTCCTCTACGAAGTGCGATACGAAATGCAGAACCGGCCCGACTGGGTGCGCATCCCCCTCCAGGCCCTC
TTGCGTATGGAGGCATCCAA

Downstream 100 bases:

>100_bases
GTCAATGCCTCGACACAGAGGCGTTCGCCGCAGCATCACCGCGGACGCCCCTGCCCCCGCCCCAAAGACAACCAGCAATC
ACAGACAAATCATTCACAAA

Product: glycogen branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE

Number of amino acids: Translated: 734; Mature: 734

Protein sequence:

>734_residues
MRKPADKAQVDAELQRVVELRHPEPHAVLGIHPDGDGVVIRAFRPDAVAIHVLPESGGRVAMTHRPGGVYEARINGKDQT
FNYLLEVEYPGKRVFTLRDPYSFLPTLGEMDLYYAGEGRHERLWERMGAHLLHHHGVRGTSFAVWAPTAAGVSVVGDFNG
WDGRLHSMRRMGSSGIWELFVPEVGEGTRYKFEIRPGQGGPNVLKADPFAFRTEVPPATASVVHDLARYTWGDAAWLEQR
AQRRDVHHQPWSVYEVHLGSWRRVVEDGDRPMTYRELAPALAEYIKFTGFTHIELLPVAEHPYGGSWGYQVGGYYAPTAR
FGHPDDLRFFIDHMHQEGIGVLVDWVPGHFPRDLHALGQFDGTALYEHADPRKGAQPDWGTLVFNFGRNEVRNFLIANAL
FWIEEYHIDGLRVDAVASMLYLDYSRKQGEWIPNRWGGRENEEAIHFLRELNETVHRKHPGVVVIAEESTAWPKVSAPVS
EGGLGFDYKWNMGWMHDTLSYFSKDPIYRQYHHNQLTFGLLYAFSEQFMLPLSHDEVVHGKGSLYGRMPGDPWQKRANLR
ALFAWMWAHPGKKLVFMGGEFGQPAEWNHDKSLDWHLTHDPGHHGILQLVSDLNRIYRDMPALHDADGEPMGFQWLQPDS
AAYNVFAFVRRARQPGRHVVCIANLSPTVRENYRVGFPFQGRYVELLNTDAEQYGGSNLGNMGQIHTEPTGWDGQPASAT
LTLPPLSVLWFTPG

Sequences:

>Translated_734_residues
MRKPADKAQVDAELQRVVELRHPEPHAVLGIHPDGDGVVIRAFRPDAVAIHVLPESGGRVAMTHRPGGVYEARINGKDQT
FNYLLEVEYPGKRVFTLRDPYSFLPTLGEMDLYYAGEGRHERLWERMGAHLLHHHGVRGTSFAVWAPTAAGVSVVGDFNG
WDGRLHSMRRMGSSGIWELFVPEVGEGTRYKFEIRPGQGGPNVLKADPFAFRTEVPPATASVVHDLARYTWGDAAWLEQR
AQRRDVHHQPWSVYEVHLGSWRRVVEDGDRPMTYRELAPALAEYIKFTGFTHIELLPVAEHPYGGSWGYQVGGYYAPTAR
FGHPDDLRFFIDHMHQEGIGVLVDWVPGHFPRDLHALGQFDGTALYEHADPRKGAQPDWGTLVFNFGRNEVRNFLIANAL
FWIEEYHIDGLRVDAVASMLYLDYSRKQGEWIPNRWGGRENEEAIHFLRELNETVHRKHPGVVVIAEESTAWPKVSAPVS
EGGLGFDYKWNMGWMHDTLSYFSKDPIYRQYHHNQLTFGLLYAFSEQFMLPLSHDEVVHGKGSLYGRMPGDPWQKRANLR
ALFAWMWAHPGKKLVFMGGEFGQPAEWNHDKSLDWHLTHDPGHHGILQLVSDLNRIYRDMPALHDADGEPMGFQWLQPDS
AAYNVFAFVRRARQPGRHVVCIANLSPTVRENYRVGFPFQGRYVELLNTDAEQYGGSNLGNMGQIHTEPTGWDGQPASAT
LTLPPLSVLWFTPG
>Mature_734_residues
MRKPADKAQVDAELQRVVELRHPEPHAVLGIHPDGDGVVIRAFRPDAVAIHVLPESGGRVAMTHRPGGVYEARINGKDQT
FNYLLEVEYPGKRVFTLRDPYSFLPTLGEMDLYYAGEGRHERLWERMGAHLLHHHGVRGTSFAVWAPTAAGVSVVGDFNG
WDGRLHSMRRMGSSGIWELFVPEVGEGTRYKFEIRPGQGGPNVLKADPFAFRTEVPPATASVVHDLARYTWGDAAWLEQR
AQRRDVHHQPWSVYEVHLGSWRRVVEDGDRPMTYRELAPALAEYIKFTGFTHIELLPVAEHPYGGSWGYQVGGYYAPTAR
FGHPDDLRFFIDHMHQEGIGVLVDWVPGHFPRDLHALGQFDGTALYEHADPRKGAQPDWGTLVFNFGRNEVRNFLIANAL
FWIEEYHIDGLRVDAVASMLYLDYSRKQGEWIPNRWGGRENEEAIHFLRELNETVHRKHPGVVVIAEESTAWPKVSAPVS
EGGLGFDYKWNMGWMHDTLSYFSKDPIYRQYHHNQLTFGLLYAFSEQFMLPLSHDEVVHGKGSLYGRMPGDPWQKRANLR
ALFAWMWAHPGKKLVFMGGEFGQPAEWNHDKSLDWHLTHDPGHHGILQLVSDLNRIYRDMPALHDADGEPMGFQWLQPDS
AAYNVFAFVRRARQPGRHVVCIANLSPTVRENYRVGFPFQGRYVELLNTDAEQYGGSNLGNMGQIHTEPTGWDGQPASAT
LTLPPLSVLWFTPG

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family

Homologues:

Organism=Homo sapiens, GI189458812, Length=680, Percent_Identity=27.7941176470588, Blast_Score=191, Evalue=2e-48,
Organism=Escherichia coli, GI1789839, Length=714, Percent_Identity=51.8207282913165, Blast_Score=716, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17554896, Length=633, Percent_Identity=26.5402843601896, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI32564391, Length=598, Percent_Identity=26.2541806020067, Blast_Score=167, Evalue=2e-41,
Organism=Saccharomyces cerevisiae, GI6320826, Length=667, Percent_Identity=25.9370314842579, Blast_Score=168, Evalue=3e-42,
Organism=Drosophila melanogaster, GI28573410, Length=644, Percent_Identity=28.416149068323, Blast_Score=189, Evalue=5e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGB_MYXXD (Q1D654)

Other databases:

- EMBL:   CP000113
- RefSeq:   YP_631869.1
- ProteinModelPortal:   Q1D654
- SMR:   Q1D654
- STRING:   Q1D654
- GeneID:   4107458
- GenomeReviews:   CP000113_GR
- KEGG:   mxa:MXAN_3682
- TIGR:   MXAN_3682
- eggNOG:   COG0296
- HOGENOM:   HBG287139
- OMA:   PPLATIM
- PhylomeDB:   Q1D654
- ProtClustDB:   PRK05402
- BioCyc:   MXAN246197:MXAN_3682-MONOMER
- HAMAP:   MF_00685
- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756
- Gene3D:   G3DSA:2.60.40.1180
- Gene3D:   G3DSA:3.20.20.80
- Gene3D:   G3DSA:2.60.40.10
- TIGRFAMs:   TIGR01515

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48; SSF51445 Glyco_hydro_cat; SSF81296 Ig_E-set

EC number: =2.4.1.18

Molecular weight: Translated: 83384; Mature: 83384

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: ACT_SITE 309-309 ACT_SITE 344-344 ACT_SITE 349-349 ACT_SITE 412-412 ACT_SITE 414-414 ACT_SITE 467-467 ACT_SITE 534-534 ACT_SITE 535-535

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKPADKAQVDAELQRVVELRHPEPHAVLGIHPDGDGVVIRAFRPDAVAIHVLPESGGRV
CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCEEEEEEEECCCCEE
AMTHRPGGVYEARINGKDQTFNYLLEVEYPGKRVFTLRDPYSFLPTLGEMDLYYAGEGRH
EEEECCCCEEEEEECCCCCEEEEEEEEECCCCEEEEECCCHHHCCCCCCCEEEEECCCHH
ERLWERMGAHLLHHHGVRGTSFAVWAPTAAGVSVVGDFNGWDGRLHSMRRMGSSGIWELF
HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEECCCCCCHHHHHHHHCCCCCCEEEE
VPEVGEGTRYKFEIRPGQGGPNVLKADPFAFRTEVPPATASVVHDLARYTWGDAAWLEQR
CCCCCCCCEEEEEEECCCCCCCCEECCCCEEECCCCCHHHHHHHHHHHHCCCCHHHHHHH
AQRRDVHHQPWSVYEVHLGSWRRVVEDGDRPMTYRELAPALAEYIKFTGFTHIELLPVAE
HHHCCCCCCCCEEEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECC
HPYGGSWGYQVGGYYAPTARFGHPDDLRFFIDHMHQEGIGVLVDWVPGHFPRDLHALGQF
CCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHCCC
DGTALYEHADPRKGAQPDWGTLVFNFGRNEVRNFLIANALFWIEEYHIDGLRVDAVASML
CCCEEECCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHH
YLDYSRKQGEWIPNRWGGRENEEAIHFLRELNETVHRKHPGVVVIAEESTAWPKVSAPVS
HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC
EGGLGFDYKWNMGWMHDTLSYFSKDPIYRQYHHNQLTFGLLYAFSEQFMLPLSHDEVVHG
CCCCCEEEEECCCHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHEEEECCCCCEEEC
KGSLYGRMPGDPWQKRANLRALFAWMWAHPGKKLVFMGGEFGQPAEWNHDKSLDWHLTHD
CCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEECCC
PGHHGILQLVSDLNRIYRDMPALHDADGEPMGFQWLQPDSAAYNVFAFVRRARQPGRHVV
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEE
CIANLSPTVRENYRVGFPFQGRYVELLNTDAEQYGGSNLGNMGQIHTEPTGWDGQPASAT
EEECCCCHHHCCEEECCCCCCCEEEEECCCHHHHCCCCCCCCCEEECCCCCCCCCCCCEE
LTLPPLSVLWFTPG
EECCCEEEEEECCC
>Mature Secondary Structure
MRKPADKAQVDAELQRVVELRHPEPHAVLGIHPDGDGVVIRAFRPDAVAIHVLPESGGRV
CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCEEEEEEEECCCCEE
AMTHRPGGVYEARINGKDQTFNYLLEVEYPGKRVFTLRDPYSFLPTLGEMDLYYAGEGRH
EEEECCCCEEEEEECCCCCEEEEEEEEECCCCEEEEECCCHHHCCCCCCCEEEEECCCHH
ERLWERMGAHLLHHHGVRGTSFAVWAPTAAGVSVVGDFNGWDGRLHSMRRMGSSGIWELF
HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEECCCCCCHHHHHHHHCCCCCCEEEE
VPEVGEGTRYKFEIRPGQGGPNVLKADPFAFRTEVPPATASVVHDLARYTWGDAAWLEQR
CCCCCCCCEEEEEEECCCCCCCCEECCCCEEECCCCCHHHHHHHHHHHHCCCCHHHHHHH
AQRRDVHHQPWSVYEVHLGSWRRVVEDGDRPMTYRELAPALAEYIKFTGFTHIELLPVAE
HHHCCCCCCCCEEEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECC
HPYGGSWGYQVGGYYAPTARFGHPDDLRFFIDHMHQEGIGVLVDWVPGHFPRDLHALGQF
CCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHCCC
DGTALYEHADPRKGAQPDWGTLVFNFGRNEVRNFLIANALFWIEEYHIDGLRVDAVASML
CCCEEECCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHH
YLDYSRKQGEWIPNRWGGRENEEAIHFLRELNETVHRKHPGVVVIAEESTAWPKVSAPVS
HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC
EGGLGFDYKWNMGWMHDTLSYFSKDPIYRQYHHNQLTFGLLYAFSEQFMLPLSHDEVVHG
CCCCCEEEEECCCHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHEEEECCCCCEEEC
KGSLYGRMPGDPWQKRANLRALFAWMWAHPGKKLVFMGGEFGQPAEWNHDKSLDWHLTHD
CCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEECCC
PGHHGILQLVSDLNRIYRDMPALHDADGEPMGFQWLQPDSAAYNVFAFVRRARQPGRHVV
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEE
CIANLSPTVRENYRVGFPFQGRYVELLNTDAEQYGGSNLGNMGQIHTEPTGWDGQPASAT
EEECCCCHHHCCEEECCCCCCCEEEEECCCHHHHCCCCCCCCCEEECCCCCCCCCCCCEE
LTLPPLSVLWFTPG
EECCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA