Click here to switch to the map view.

The map label for this gene is des [H]

Identifier: 108763635

GI number: 108763635

Start: 4073904

End: 4074932

Strand: Reverse

Name: des [H]

Synonym: MXAN_3495

Alternate gene names: 108763635

Gene position: 4074932-4073904 (Counterclockwise)

Preceding gene: 108762880

Following gene: 108762095

Centisome position: 44.58

GC content: 69.39

Gene sequence:

>1029_bases
ATGGACTCCGCGACCCGCAGCAGCGCCTTCACCTCACTCTCCCGAGACGCCGAGCGGAACCTCATCGCCCGCACGCGGCC
CTTCGCTGCGCAGGACACGCGGCGGAGCTGGTGGGAAGTAGGCACCACCTTCGCGGCCCTGCTGGGCGCCATCGCGCTCG
CCGCCCTTCCCTCCTGGTGGCCCCTGCGCATCGTGGGCAGCGTGGTGCAAGCGCTGGCGCTGATCCGCTCCTTCATCCTG
GTCCACGACTACTTGCACGGTTCACTGCTGTCGGGCTCGCGGATCGCCAAAGCCCTGTTCCACACCCACGCGGTGCTGCT
GCTCACGCCGCCGCGCGTCTGGACCGAGTCGCACAACCACCACCATGCGAACACGGCGCGGCTGGCTGCCTCCGCGTCAG
GGACGTTCACCACGTGGACGGCGCAGCAGTGGCGAGAGGCCACGGCGCTGGAGCGGCTGGCCTACGTGGTGGAGCGGCAT
CCGCTTGTGATGATCTTCGCGTACCCGCTCGCGTTCCTGGGTGGGCTGTGCATCGTGCCTTTCGTGAAGCACCCGCTGCG
CTACTGGAGCGCGGGCTTCGCCGTGCTCCTCCACGTGACCATCAGCGCGGCGGTGTTCCACTTCGGGGGCCTGGGCGTGT
ACCTCACGGCGATGGTGCTGCCGCTGTCCCTCGGCTACGCGCTGGGGGCGTACCTCTTCTTCTCCCAGCACAACTTCCCG
GACGTCGCGCTGCGCGAGGACCCGGACTGGACGCACGCGAGCGCGGCCCTGGAGGCGTCGAGCTACCTGGCCTGCGGCCC
CGTCATGGCGTGGTTCACCGGCAACATCGGCTACCACCACGTCCACCACCTCAACCCGCGCATCCCCTTCTACCGGCTGC
CGGAGGCCATGGCCGCCATCCCCGAACTGCAGAACCCGCGCACCACCACCCTGCACCCCAGGGACGTGCTGGCCTGTCTG
CGACTCAACGTCTGGGACGGAAAGCGGGGTCGCATGGTCCGGTTCCGGGACGTTCCCGCGTCACGCTGA

Upstream 100 bases:

>100_bases
CCAATAGCACTGCCCATGACGGTCGCATGACAGTGGGTGGGCATGGTTCCAGGGACTCGAATCGGCGGCAGCCGCCGCCG
TGCCAGCCCTGGACTTCCGA

Downstream 100 bases:

>100_bases
GGGCGCCCGGCAGGGCCCCTAGGGAGCGGAAGGCTGGAAACGGTGATGCTGGCGCGTTGCGCGCGCCGGGCCGCCTGCTA
TAAGGCACGTCGTTGTGCAC

Product: fatty acid desaturase family protein

Products: NA

Alternate protein names: Delta(5) acyl-lipid desaturase; Delta(5) desaturase [H]

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MDSATRSSAFTSLSRDAERNLIARTRPFAAQDTRRSWWEVGTTFAALLGAIALAALPSWWPLRIVGSVVQALALIRSFIL
VHDYLHGSLLSGSRIAKALFHTHAVLLLTPPRVWTESHNHHHANTARLAASASGTFTTWTAQQWREATALERLAYVVERH
PLVMIFAYPLAFLGGLCIVPFVKHPLRYWSAGFAVLLHVTISAAVFHFGGLGVYLTAMVLPLSLGYALGAYLFFSQHNFP
DVALREDPDWTHASAALEASSYLACGPVMAWFTGNIGYHHVHHLNPRIPFYRLPEAMAAIPELQNPRTTTLHPRDVLACL
RLNVWDGKRGRMVRFRDVPASR

Sequences:

>Translated_342_residues
MDSATRSSAFTSLSRDAERNLIARTRPFAAQDTRRSWWEVGTTFAALLGAIALAALPSWWPLRIVGSVVQALALIRSFIL
VHDYLHGSLLSGSRIAKALFHTHAVLLLTPPRVWTESHNHHHANTARLAASASGTFTTWTAQQWREATALERLAYVVERH
PLVMIFAYPLAFLGGLCIVPFVKHPLRYWSAGFAVLLHVTISAAVFHFGGLGVYLTAMVLPLSLGYALGAYLFFSQHNFP
DVALREDPDWTHASAALEASSYLACGPVMAWFTGNIGYHHVHHLNPRIPFYRLPEAMAAIPELQNPRTTTLHPRDVLACL
RLNVWDGKRGRMVRFRDVPASR
>Mature_342_residues
MDSATRSSAFTSLSRDAERNLIARTRPFAAQDTRRSWWEVGTTFAALLGAIALAALPSWWPLRIVGSVVQALALIRSFIL
VHDYLHGSLLSGSRIAKALFHTHAVLLLTPPRVWTESHNHHHANTARLAASASGTFTTWTAQQWREATALERLAYVVERH
PLVMIFAYPLAFLGGLCIVPFVKHPLRYWSAGFAVLLHVTISAAVFHFGGLGVYLTAMVLPLSLGYALGAYLFFSQHNFP
DVALREDPDWTHASAALEASSYLACGPVMAWFTGNIGYHHVHHLNPRIPFYRLPEAMAAIPELQNPRTTTLHPRDVLACL
RLNVWDGKRGRMVRFRDVPASR

Specific function: Catalyzes the introduction of a cis-double bond at the delta(5) position of existing saturated fatty acids attached to membrane phospholipids. It is not strictly specific for palmitic acid (C16) but can also accept C14 as well as C18 species to yield unsa

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fatty acid desaturase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: 1.14.99.-

Molecular weight: Translated: 38085; Mature: 38085

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSATRSSAFTSLSRDAERNLIARTRPFAAQDTRRSWWEVGTTFAALLGAIALAALPSWW
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PLRIVGSVVQALALIRSFILVHDYLHGSLLSGSRIAKALFHTHAVLLLTPPRVWTESHNH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCEEEEEECCHHHCCCCCC
HHANTARLAASASGTFTTWTAQQWREATALERLAYVVERHPLVMIFAYPLAFLGGLCIVP
CCCHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHH
FVKHPLRYWSAGFAVLLHVTISAAVFHFGGLGVYLTAMVLPLSLGYALGAYLFFSQHNFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DVALREDPDWTHASAALEASSYLACGPVMAWFTGNIGYHHVHHLNPRIPFYRLPEAMAAI
CCEECCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCEECCHHHHHC
PELQNPRTTTLHPRDVLACLRLNVWDGKRGRMVRFRDVPASR
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MDSATRSSAFTSLSRDAERNLIARTRPFAAQDTRRSWWEVGTTFAALLGAIALAALPSWW
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PLRIVGSVVQALALIRSFILVHDYLHGSLLSGSRIAKALFHTHAVLLLTPPRVWTESHNH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCEEEEEECCHHHCCCCCC
HHANTARLAASASGTFTTWTAQQWREATALERLAYVVERHPLVMIFAYPLAFLGGLCIVP
CCCHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHH
FVKHPLRYWSAGFAVLLHVTISAAVFHFGGLGVYLTAMVLPLSLGYALGAYLFFSQHNFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DVALREDPDWTHASAALEASSYLACGPVMAWFTGNIGYHHVHHLNPRIPFYRLPEAMAAI
CCEECCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCEECCHHHHHC
PELQNPRTTTLHPRDVLACLRLNVWDGKRGRMVRFRDVPASR
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9555904; 9384377 [H]