Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
---|---|
Accession | NC_008095 |
Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is yjjJ [H]
Identifier: 108763598
GI number: 108763598
Start: 15080
End: 16390
Strand: Direct
Name: yjjJ [H]
Synonym: MXAN_0015
Alternate gene names: 108763598
Gene position: 15080-16390 (Clockwise)
Preceding gene: 108757906
Following gene: 108758631
Centisome position: 0.16
GC content: 67.58
Gene sequence:
>1311_bases ATGGCAACCCTGGAACAACTGCTCGCCGTACTCGGACGTCAGGTCGAGGTGAAGGGGAGCGAGCTGGCTACCCAGCTCCG GGTGTCACGCCCGACAGTGTCGCGGTTGCTGGCCTCCGCAGGCCCGAGCGTCTGCCGAATGGGGCAGGGGCCCGCCACAC GCTATGCGCGGACCCGCTCGATTGCCCCCTTGGGCGAACAGGTACGGATGTACCGCGTCGACGAGACCGGCCGTCCCCAC GAGGCAGGCGTCCTGCACCCGCTGTGGAACGGGGGCTGCTGGATTGCGCGAGAGGACGGGGTAGGTGAACGGTTCGCCGG GCTGCCGCCTTTCGCCGCCGACATGAGCCCTCAGGGCTACCTGGGCCGAGGCTTCACGAGCCGTCACCTCGAGTTGGGAC TCCCCCCTCGCATCACGGACTGGACGGAGGACCACCAGCTCATCGCACTGGCGTTGCGAGGCGATGACTGCGTCGGAAAC CACATCATCGGCGCGGCCTCCCTGGACCGGTTTCTCGCAAGCCCGCTTCGGCCCGTCACCGAGGCCCAGTACCCGGAGCT CGCCCGCTCATCGATGTCGAGCGAGGCAGGCTCCTTCGCCGGTGGCGATCAACCCAAGTTCACTGCCTATGCCGAGCGAC GCCACGTCCTGGTGAAGTTCGCGGCCAACGATGACGGCGCCGCCGCCCAACGTTGGAGAGAGCTGCTCGTCTGCGAAGGC CTCGCGCTCGAAGTGGTCCGCAACGCCGGGATTCCGGCCGCGGCTTCGCGCTCCATCCGCGTCGAGGGCTACCAGTTCCT CGAGGTCGAGCGCTTCGACCGGGTGGGTGAAAGAGGCCGCAAGGCGCTGCTCTCACTCAAGGCCATCGACAACGAGTACC TCGGCCACGAAGGGAAGGGGAGCACCTGGACCAGCGCGGCCCGCTACCTCCTCCAGAGCCAGTACATCAGCGAAGAGGAC GTCAGGCGCATTCGCTGGCTCGACACCTTCGGGCAGCTCACCGGCAACACCGACCGGCACTTCGGCAACCTCTCCTTCTT CGAGGACGGACCCAAGCGGTTCCGGCTCGCCCCTGCCTACGACATGCTCCCGATGATGTTCGCCCCCGTGGGCACGAGCA TCATCGATCGCACCTTCGAGCCCCGGCCGCCCACCTCGGAGACGCTCGATGTCTGGGCCGATGCCGCACAACACGCACTG GCCTACTGGAGCCGGCTGGAGCAGACCCCCGAACTCAGCGACACGTTCCGCGGCCACTGCGCACGATGCAGGGACTCACT TGCCGCGCTGATGCAGCGGACGCCGGTCTGA
Upstream 100 bases:
>100_bases CAGAGCTTCAATAGATCGAGCCTGCGCGGCTGGTATTTCTTAGTGATATCGATGAGTTGCACGCCGATATCTCTTCACGG ATCCTTTCAGGAATCTGTTC
Downstream 100 bases:
>100_bases GCCGGCGTCCGCTCCGTCTTCCTACGGCGTATAGGCGACTGTCAGCACCGCGTTCGCCCCATCCCGGATGAACAGGTACT GCGTGGCCGTCTGCGCCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MATLEQLLAVLGRQVEVKGSELATQLRVSRPTVSRLLASAGPSVCRMGQGPATRYARTRSIAPLGEQVRMYRVDETGRPH EAGVLHPLWNGGCWIAREDGVGERFAGLPPFAADMSPQGYLGRGFTSRHLELGLPPRITDWTEDHQLIALALRGDDCVGN HIIGAASLDRFLASPLRPVTEAQYPELARSSMSSEAGSFAGGDQPKFTAYAERRHVLVKFAANDDGAAAQRWRELLVCEG LALEVVRNAGIPAAASRSIRVEGYQFLEVERFDRVGERGRKALLSLKAIDNEYLGHEGKGSTWTSAARYLLQSQYISEED VRRIRWLDTFGQLTGNTDRHFGNLSFFEDGPKRFRLAPAYDMLPMMFAPVGTSIIDRTFEPRPPTSETLDVWADAAQHAL AYWSRLEQTPELSDTFRGHCARCRDSLAALMQRTPV
Sequences:
>Translated_436_residues MATLEQLLAVLGRQVEVKGSELATQLRVSRPTVSRLLASAGPSVCRMGQGPATRYARTRSIAPLGEQVRMYRVDETGRPH EAGVLHPLWNGGCWIAREDGVGERFAGLPPFAADMSPQGYLGRGFTSRHLELGLPPRITDWTEDHQLIALALRGDDCVGN HIIGAASLDRFLASPLRPVTEAQYPELARSSMSSEAGSFAGGDQPKFTAYAERRHVLVKFAANDDGAAAQRWRELLVCEG LALEVVRNAGIPAAASRSIRVEGYQFLEVERFDRVGERGRKALLSLKAIDNEYLGHEGKGSTWTSAARYLLQSQYISEED VRRIRWLDTFGQLTGNTDRHFGNLSFFEDGPKRFRLAPAYDMLPMMFAPVGTSIIDRTFEPRPPTSETLDVWADAAQHAL AYWSRLEQTPELSDTFRGHCARCRDSLAALMQRTPV >Mature_435_residues ATLEQLLAVLGRQVEVKGSELATQLRVSRPTVSRLLASAGPSVCRMGQGPATRYARTRSIAPLGEQVRMYRVDETGRPHE AGVLHPLWNGGCWIAREDGVGERFAGLPPFAADMSPQGYLGRGFTSRHLELGLPPRITDWTEDHQLIALALRGDDCVGNH IIGAASLDRFLASPLRPVTEAQYPELARSSMSSEAGSFAGGDQPKFTAYAERRHVLVKFAANDDGAAAQRWRELLVCEGL ALEVVRNAGIPAAASRSIRVEGYQFLEVERFDRVGERGRKALLSLKAIDNEYLGHEGKGSTWTSAARYLLQSQYISEEDV RRIRWLDTFGQLTGNTDRHFGNLSFFEDGPKRFRLAPAYDMLPMMFAPVGTSIIDRTFEPRPPTSETLDVWADAAQHALA YWSRLEQTPELSDTFRGHCARCRDSLAALMQRTPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790845, Length=417, Percent_Identity=35.0119904076739, Blast_Score=224, Evalue=8e-60,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012893 - InterPro: IPR012894 [H]
Pfam domain/function: PF07804 HipA_C; PF07805 HipA_N [H]
EC number: NA
Molecular weight: Translated: 48297; Mature: 48166
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLEQLLAVLGRQVEVKGSELATQLRVSRPTVSRLLASAGPSVCRMGQGPATRYARTRS CCCHHHHHHHHCCEEEECHHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHCC IAPLGEQVRMYRVDETGRPHEAGVLHPLWNGGCWIAREDGVGERFAGLPPFAADMSPQGY CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHCCCCCCCCCCCCCCC LGRGFTSRHLELGLPPRITDWTEDHQLIALALRGDDCVGNHIIGAASLDRFLASPLRPVT CCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCEECHHHHHHHHHCCCCHHH EAQYPELARSSMSSEAGSFAGGDQPKFTAYAERRHVLVKFAANDDGAAAQRWRELLVCEG HCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHCC LALEVVRNAGIPAAASRSIRVEGYQFLEVERFDRVGERGRKALLSLKAIDNEYLGHEGKG HHHHHHHHCCCCCCCCCCEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC STWTSAARYLLQSQYISEEDVRRIRWLDTFGQLTGNTDRHFGNLSFFEDGPKRFRLAPAY CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHEEECCHH DMLPMMFAPVGTSIIDRTFEPRPPTSETLDVWADAAQHALAYWSRLEQTPELSDTFRGHC HHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH ARCRDSLAALMQRTPV HHHHHHHHHHHHHCCC >Mature Secondary Structure ATLEQLLAVLGRQVEVKGSELATQLRVSRPTVSRLLASAGPSVCRMGQGPATRYARTRS CCHHHHHHHHCCEEEECHHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHCC IAPLGEQVRMYRVDETGRPHEAGVLHPLWNGGCWIAREDGVGERFAGLPPFAADMSPQGY CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHCCCCCCCCCCCCCCC LGRGFTSRHLELGLPPRITDWTEDHQLIALALRGDDCVGNHIIGAASLDRFLASPLRPVT CCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCEECHHHHHHHHHCCCCHHH EAQYPELARSSMSSEAGSFAGGDQPKFTAYAERRHVLVKFAANDDGAAAQRWRELLVCEG HCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHCC LALEVVRNAGIPAAASRSIRVEGYQFLEVERFDRVGERGRKALLSLKAIDNEYLGHEGKG HHHHHHHHCCCCCCCCCCEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC STWTSAARYLLQSQYISEEDVRRIRWLDTFGQLTGNTDRHFGNLSFFEDGPKRFRLAPAY CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHEEECCHH DMLPMMFAPVGTSIIDRTFEPRPPTSETLDVWADAAQHALAYWSRLEQTPELSDTFRGHC HHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH ARCRDSLAALMQRTPV HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 3299264 [H]