| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yghO [H]
Identifier: 108763564
GI number: 108763564
Start: 4461586
End: 4462758
Strand: Reverse
Name: yghO [H]
Synonym: MXAN_3747
Alternate gene names: 108763564
Gene position: 4462758-4461586 (Counterclockwise)
Preceding gene: 108758682
Following gene: 108758472
Centisome position: 48.83
GC content: 68.54
Gene sequence:
>1173_bases ATGGCCCTCCACGCCGAGCCAACCCACGCGTCTTCGTCCATGCCCTCGGACGTGCAGGTGACCCCTGTCCGCGGCGAGGC GGAGCGGATGCAGTTCATCCGACTCCCCTACGCCCTCTACCGGAGCGACCCGCACTGGGTTCCTCCGCTGGAGATGGAGC GCCGGGACTTCCTGGACCCGAAGAAGAACCCCTTCTTCGAGTACGGCGAACTGGAGCTGTTCCTCGCCCGGCGCGGCCCG GACGTCGTGGGCCGCATCGCCGCCATCCGCAATCCGCGGCACATGGAGATTCACGGCACGAAGGAGGGCTTCTTCGGTCT CTTCGAGTGCGTGAATGACGCGGGCGTCGCCCGGACCCTGCTGGAATCCGCCGCGACCTGGCTGCGCCTGCGGGGCATGG ACGCCATGCTGGGGCCGGCGAACCTGTCCTCCAACCAGGACTGGGGCCTGCTCATCGACGGCTTCGATACGCCGCCCGCC GTGATGATGCCGCACAACCCGCCCTACTACGCGGCGCTGCTGGAGGCCTGCGGCCTGACGAAGGCCAAGGACCTGTACGC CTACGAGCTGTCGTCGTCCGCGCAGCCGCCGGAGAAGGTGGTGCGCATCGCGGAGAAGATTCGCGTGCGCGACGGCGTCG TCGTGCGTCCGGTCAACATGAAGGACCTGGACGCCGAGGTGAAGCGCATCCGCGACATCTACAACTCGGCGTGGGAGAAG AACTGGGGCTTCGTGCCCTTCACCGATGCGGAGTTCGACCACCTGGCCAAGGAGCTCAAGACGGTCGTCCGGCCGGACCT CGCGCTCATGGCGGAGGTCCAGGGCGAGCCGGTGGCCTTCTCCCTGACGGTGCCGGATGCCAACCAGGCCATCCGCGCGG CCAACGGGCGGCTCACCACGTTCGGCCTGCCCATCGGCCTGGTGAAGCTGGCGCTGGCCTCGCGCCGCATCAACCGGCTG CGCCTCATCATCCTCGGCATCAAGGAGGGCTACCGGCGCCGCGGCCTGGACGCCATCCTGTACCTGGACACCCTGCGCAC GGCGAAGCGGCTGGGCTACGTGGGCGGGGAGATCTCCTGGACGCTCGAGGACAACCACCTGGTCAACCGCGCCATCGAGT CCATGGGCGCCCAGCGCTCCAAGACGTACCGCGTCTACACGCGCGCGCTCTGA
Upstream 100 bases:
>100_bases CTGTGGGAGAAGCGCGGCGAGCTGCCGGGCTTGTTGTTGGAGAAGGGCGCTCACTTCTTCATGCGCAACGGCGCCCACTC CGACCGGAACTGAACCGCCC
Downstream 100 bases:
>100_bases CCACAGCCCGACTCCGAGGAGTCTTCCTTGCGATTCCTGCTCACTGGCGGCACCGGGTTCATTGGCCAGCGGCTCGCGCG CCGCATCGTGGAACGTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MALHAEPTHASSSMPSDVQVTPVRGEAERMQFIRLPYALYRSDPHWVPPLEMERRDFLDPKKNPFFEYGELELFLARRGP DVVGRIAAIRNPRHMEIHGTKEGFFGLFECVNDAGVARTLLESAATWLRLRGMDAMLGPANLSSNQDWGLLIDGFDTPPA VMMPHNPPYYAALLEACGLTKAKDLYAYELSSSAQPPEKVVRIAEKIRVRDGVVVRPVNMKDLDAEVKRIRDIYNSAWEK NWGFVPFTDAEFDHLAKELKTVVRPDLALMAEVQGEPVAFSLTVPDANQAIRAANGRLTTFGLPIGLVKLALASRRINRL RLIILGIKEGYRRRGLDAILYLDTLRTAKRLGYVGGEISWTLEDNHLVNRAIESMGAQRSKTYRVYTRAL
Sequences:
>Translated_390_residues MALHAEPTHASSSMPSDVQVTPVRGEAERMQFIRLPYALYRSDPHWVPPLEMERRDFLDPKKNPFFEYGELELFLARRGP DVVGRIAAIRNPRHMEIHGTKEGFFGLFECVNDAGVARTLLESAATWLRLRGMDAMLGPANLSSNQDWGLLIDGFDTPPA VMMPHNPPYYAALLEACGLTKAKDLYAYELSSSAQPPEKVVRIAEKIRVRDGVVVRPVNMKDLDAEVKRIRDIYNSAWEK NWGFVPFTDAEFDHLAKELKTVVRPDLALMAEVQGEPVAFSLTVPDANQAIRAANGRLTTFGLPIGLVKLALASRRINRL RLIILGIKEGYRRRGLDAILYLDTLRTAKRLGYVGGEISWTLEDNHLVNRAIESMGAQRSKTYRVYTRAL >Mature_389_residues ALHAEPTHASSSMPSDVQVTPVRGEAERMQFIRLPYALYRSDPHWVPPLEMERRDFLDPKKNPFFEYGELELFLARRGPD VVGRIAAIRNPRHMEIHGTKEGFFGLFECVNDAGVARTLLESAATWLRLRGMDAMLGPANLSSNQDWGLLIDGFDTPPAV MMPHNPPYYAALLEACGLTKAKDLYAYELSSSAQPPEKVVRIAEKIRVRDGVVVRPVNMKDLDAEVKRIRDIYNSAWEKN WGFVPFTDAEFDHLAKELKTVVRPDLALMAEVQGEPVAFSLTVPDANQAIRAANGRLTTFGLPIGLVKLALASRRINRLR LIILGIKEGYRRRGLDAILYLDTLRTAKRLGYVGGEISWTLEDNHLVNRAIESMGAQRSKTYRVYTRAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43898; Mature: 43767
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALHAEPTHASSSMPSDVQVTPVRGEAERMQFIRLPYALYRSDPHWVPPLEMERRDFLDP CCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHCCCC KKNPFFEYGELELFLARRGPDVVGRIAAIRNPRHMEIHGTKEGFFGLFECVNDAGVARTL CCCCCEECCCEEEEEECCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCHHHHHH LESAATWLRLRGMDAMLGPANLSSNQDWGLLIDGFDTPPAVMMPHNPPYYAALLEACGLT HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCHHHHHHHHHCCC KAKDLYAYELSSSAQPPEKVVRIAEKIRVRDGVVVRPVNMKDLDAEVKRIRDIYNSAWEK CHHHEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHC NWGFVPFTDAEFDHLAKELKTVVRPDLALMAEVQGEPVAFSLTVPDANQAIRAANGRLTT CCCEEECCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEEECCCCHHHHHHCCCEEEE FGLPIGLVKLALASRRINRLRLIILGIKEGYRRRGLDAILYLDTLRTAKRLGYVGGEISW ECCCHHHHHHHHHHHHHCEEEEEEEECHHHHHHCCCEEEEHHHHHHHHHHHCCCCCEEEE TLEDNHLVNRAIESMGAQRSKTYRVYTRAL EECCCHHHHHHHHHHCCCCCCEEEEEEECC >Mature Secondary Structure ALHAEPTHASSSMPSDVQVTPVRGEAERMQFIRLPYALYRSDPHWVPPLEMERRDFLDP CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHCCCC KKNPFFEYGELELFLARRGPDVVGRIAAIRNPRHMEIHGTKEGFFGLFECVNDAGVARTL CCCCCEECCCEEEEEECCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCHHHHHH LESAATWLRLRGMDAMLGPANLSSNQDWGLLIDGFDTPPAVMMPHNPPYYAALLEACGLT HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCHHHHHHHHHCCC KAKDLYAYELSSSAQPPEKVVRIAEKIRVRDGVVVRPVNMKDLDAEVKRIRDIYNSAWEK CHHHEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHC NWGFVPFTDAEFDHLAKELKTVVRPDLALMAEVQGEPVAFSLTVPDANQAIRAANGRLTT CCCEEECCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEEECCCCHHHHHHCCCEEEE FGLPIGLVKLALASRRINRLRLIILGIKEGYRRRGLDAILYLDTLRTAKRLGYVGGEISW ECCCHHHHHHHHHHHHHCEEEEEEEECHHHHHHCCCEEEEHHHHHHHHHHHCCCCCEEEE TLEDNHLVNRAIESMGAQRSKTYRVYTRAL EECCCHHHHHHHHHHCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]