Click here to switch to the map view.

The map label for this gene is yfbK [H]

Identifier: 108763557

GI number: 108763557

Start: 4168835

End: 4170613

Strand: Reverse

Name: yfbK [H]

Synonym: MXAN_3574

Alternate gene names: 108763557

Gene position: 4170613-4168835 (Counterclockwise)

Preceding gene: 108757181

Following gene: 108762346

Centisome position: 45.63

GC content: 70.49

Gene sequence:

>1779_bases
ATGTCCCCCTTCTCGCTGAAGCGCCAACTGACTGTCTGGGGAAGTGCCCTTCTCGTCGCCAGCACCCTGCCCGCGTGCCA
CAACCGGAGCCCCGCCGCCGACGAGCGGCCGAGCCTGGGGGCCGCACAGTCCGTTGCCAGGGATGACGACGCCGCGCACG
CTCCTGAGCGAGAGGAGTACGTCGCGGACCGGGCCAGCGCCGAGCATTCCGTGGCAGCCCCGGCCCCTGCGGCTCCCCCG
GCTTCCGCGCTCGCCGGGCCCGTTGCGCGCGCACCCGCGCCGCAAGCCGCCAAGAAGGTCTCCCTGGGCAAGGCCGAGCT
GCACCGGCGCGAACCGCGCCCCATGAAGCCGTCCGCTGACGCCTTGGCGGGCGCGCCCCTCGAGTCCAAACCACAAGACG
CCGCTCCCGCGGGCGGCAACACCTTCGAGGCCTGGAAGGCCAACGCCTTCGTCGAGACGGCCAAGGACCCGCTCTCCACG
TTCGCCGCGGACGTAGACACCGCGTCGTACACGGTGTCACGCCGTTACCTCGTCAACGGCCAGCTCCCGCCCGCCTCCGC
CGTCCGCGTGGAGGAGTTCGTCAACTACTTCAAGTTCCGCTACGCGCCCCCGGAGACGGGCGCCTTCGCGGTGCATCTGG
AGGGCGCGCCCTCGCCCTTCGACGCCAAGCGCCACTTCCTGCGCGTGGGCGTGCAGGGCAAGGTGGTCTCGCGCTCGCAG
CGCAAGCCCGCGCACCTCGTGTTCCTCGTGGACACGAGCGGCTCCATGCACTCGGAGGACAAGCTGCCGCTCGCGAGGGA
GGCCATCAAGGTCGCCGTCAAGAACCTCAACGAGAACGACACCGTCGCCATCGTCACCTACGCGGGCAACACCCGGGACG
TGCTGCCGCCGACGCCCGCCACCGACGCGAAGAGCATCCACGCCGCGCTCGACTCGCTCACGGCCGGTGGTGGCACGGCG
ATGGGCTCCGGCATGGAACTGGCCTACCGCCACGCCGTGAAGAAGGCCTCCGGCAGCGTGGTGTCCCGCGTCGTCGTCCT
CACCGACGGTGACGCCAACATCGGCCGGAACGTGAGCGCCAACGCCATGCTGGACAGCATCCACAAGTACACGGCCGAGG
GCGTCACCCTCACCACCGTGGGCTTCGGCATGGGCAACTACCGCGACGACCTGATGGAGAAGCTCGCGGACAAGGGCAAC
GGCAACTGCTTCTACGTGGACAGCCTGCGCGAGGCGAAGAAGGTGTTCGAGACTCAGCTCACCGGCACGCTGGAGGTCAT
CGCCAAGGACGTGAAGTTCCAGGTGGAGTTCAACCCCGCCGCCGTCCGCCGCTACCGGCTGGTGGGCTATGAGAACCGCG
ACGTCGCTGACCACGACTTCCGCAACGACAAGGTGGACGCGGGCGAGATTGGCGCCGGCCACAACGTCACCGCCGTGTAC
GAGGTGGAGCTGACGGGTGAAGCCACCGAGGCGCTGGCCACCGTCCGCGTCCGCGCCAAGGCGCCCAACGGCACCGAGGC
CTCCGAGCGCGAATTCCGCTTCGAGCGCACGAAGCTGCGTGACACGCTGGCGCAGGCGTCGCCGGACTTCCGCTTCGCCG
TCGCCGTGGCCGCCACCGCCGACGTCCTCCGCGACAGCCCCTCCGCGGAGGGTTGGAGCCTGGCCACGGCCGAGAAGCTG
GCCGAGGGCGCCACCGAGGGTGACGCCGACCGCAAGGAGTTCGTGCGGCTGGTGACGCAGGCCCGCGCCCTCAAGGGCGC
CTCCGTCCGGGGCCGCTGA

Upstream 100 bases:

>100_bases
CCGGCCCGGGTGTTCGCCGGAAAATTCATTCGGCTTTAGACCCTTTCTCGCGGGCCATGCGTTTTCGGGAGGCGACCTAC
TCACCGACCTTGGAGCCCTG

Downstream 100 bases:

>100_bases
CACCGGGGCGCAAGCCCGCACACACGTCGGGGTGGAGGGTGCCCGGGGGCCCTTCCACCCCGATGCCGTTTTTGCGGGGT
ATGCTGAGTGGCCATGCACC

Product: von Willebrand factor type A domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 592; Mature: 591

Protein sequence:

>592_residues
MSPFSLKRQLTVWGSALLVASTLPACHNRSPAADERPSLGAAQSVARDDDAAHAPEREEYVADRASAEHSVAAPAPAAPP
ASALAGPVARAPAPQAAKKVSLGKAELHRREPRPMKPSADALAGAPLESKPQDAAPAGGNTFEAWKANAFVETAKDPLST
FAADVDTASYTVSRRYLVNGQLPPASAVRVEEFVNYFKFRYAPPETGAFAVHLEGAPSPFDAKRHFLRVGVQGKVVSRSQ
RKPAHLVFLVDTSGSMHSEDKLPLAREAIKVAVKNLNENDTVAIVTYAGNTRDVLPPTPATDAKSIHAALDSLTAGGGTA
MGSGMELAYRHAVKKASGSVVSRVVVLTDGDANIGRNVSANAMLDSIHKYTAEGVTLTTVGFGMGNYRDDLMEKLADKGN
GNCFYVDSLREAKKVFETQLTGTLEVIAKDVKFQVEFNPAAVRRYRLVGYENRDVADHDFRNDKVDAGEIGAGHNVTAVY
EVELTGEATEALATVRVRAKAPNGTEASEREFRFERTKLRDTLAQASPDFRFAVAVAATADVLRDSPSAEGWSLATAEKL
AEGATEGDADRKEFVRLVTQARALKGASVRGR

Sequences:

>Translated_592_residues
MSPFSLKRQLTVWGSALLVASTLPACHNRSPAADERPSLGAAQSVARDDDAAHAPEREEYVADRASAEHSVAAPAPAAPP
ASALAGPVARAPAPQAAKKVSLGKAELHRREPRPMKPSADALAGAPLESKPQDAAPAGGNTFEAWKANAFVETAKDPLST
FAADVDTASYTVSRRYLVNGQLPPASAVRVEEFVNYFKFRYAPPETGAFAVHLEGAPSPFDAKRHFLRVGVQGKVVSRSQ
RKPAHLVFLVDTSGSMHSEDKLPLAREAIKVAVKNLNENDTVAIVTYAGNTRDVLPPTPATDAKSIHAALDSLTAGGGTA
MGSGMELAYRHAVKKASGSVVSRVVVLTDGDANIGRNVSANAMLDSIHKYTAEGVTLTTVGFGMGNYRDDLMEKLADKGN
GNCFYVDSLREAKKVFETQLTGTLEVIAKDVKFQVEFNPAAVRRYRLVGYENRDVADHDFRNDKVDAGEIGAGHNVTAVY
EVELTGEATEALATVRVRAKAPNGTEASEREFRFERTKLRDTLAQASPDFRFAVAVAATADVLRDSPSAEGWSLATAEKL
AEGATEGDADRKEFVRLVTQARALKGASVRGR
>Mature_591_residues
SPFSLKRQLTVWGSALLVASTLPACHNRSPAADERPSLGAAQSVARDDDAAHAPEREEYVADRASAEHSVAAPAPAAPPA
SALAGPVARAPAPQAAKKVSLGKAELHRREPRPMKPSADALAGAPLESKPQDAAPAGGNTFEAWKANAFVETAKDPLSTF
AADVDTASYTVSRRYLVNGQLPPASAVRVEEFVNYFKFRYAPPETGAFAVHLEGAPSPFDAKRHFLRVGVQGKVVSRSQR
KPAHLVFLVDTSGSMHSEDKLPLAREAIKVAVKNLNENDTVAIVTYAGNTRDVLPPTPATDAKSIHAALDSLTAGGGTAM
GSGMELAYRHAVKKASGSVVSRVVVLTDGDANIGRNVSANAMLDSIHKYTAEGVTLTTVGFGMGNYRDDLMEKLADKGNG
NCFYVDSLREAKKVFETQLTGTLEVIAKDVKFQVEFNPAAVRRYRLVGYENRDVADHDFRNDKVDAGEIGAGHNVTAVYE
VELTGEATEALATVRVRAKAPNGTEASEREFRFERTKLRDTLAQASPDFRFAVAVAATADVLRDSPSAEGWSLATAEKLA
EGATEGDADRKEFVRLVTQARALKGASVRGR

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Synechocystis PCC 6803 sll0103 [H]

Homologues:

Organism=Escherichia coli, GI1788606, Length=466, Percent_Identity=39.6995708154506, Blast_Score=323, Evalue=3e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021908
- InterPro:   IPR022156
- InterPro:   IPR002035 [H]

Pfam domain/function: PF12034 DUF3520; PF00092 VWA; PF12450 vWF_A [H]

EC number: NA

Molecular weight: Translated: 63113; Mature: 62982

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPFSLKRQLTVWGSALLVASTLPACHNRSPAADERPSLGAAQSVARDDDAAHAPEREEY
CCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHH
VADRASAEHSVAAPAPAAPPASALAGPVARAPAPQAAKKVSLGKAELHRREPRPMKPSAD
HHHHHCCCCCCCCCCCCCCCHHHHHCCHHCCCCCHHHHHHCCCHHHHHHCCCCCCCCCCH
ALAGAPLESKPQDAAPAGGNTFEAWKANAFVETAKDPLSTFAADVDTASYTVSRRYLVNG
HHCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEC
QLPPASAVRVEEFVNYFKFRYAPPETGAFAVHLEGAPSPFDAKRHFLRVGVQGKVVSRSQ
CCCCHHHHHHHHHHHHHHEECCCCCCCEEEEEECCCCCCHHHHHHHEEECCCCEEECCCC
RKPAHLVFLVDTSGSMHSEDKLPLAREAIKVAVKNLNENDTVAIVTYAGNTRDVLPPTPA
CCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCC
TDAKSIHAALDSLTAGGGTAMGSGMELAYRHAVKKASGSVVSRVVVLTDGDANIGRNVSA
CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCH
NAMLDSIHKYTAEGVTLTTVGFGMGNYRDDLMEKLADKGNGNCFYVDSLREAKKVFETQL
HHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHH
TGTLEVIAKDVKFQVEFNPAAVRRYRLVGYENRDVADHDFRNDKVDAGEIGAGHNVTAVY
HHHHHHHEECEEEEEEECHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
EVELTGEATEALATVRVRAKAPNGTEASEREFRFERTKLRDTLAQASPDFRFAVAVAATA
EEEECCCHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHH
DVLRDSPSAEGWSLATAEKLAEGATEGDADRKEFVRLVTQARALKGASVRGR
HHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SPFSLKRQLTVWGSALLVASTLPACHNRSPAADERPSLGAAQSVARDDDAAHAPEREEY
CCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHH
VADRASAEHSVAAPAPAAPPASALAGPVARAPAPQAAKKVSLGKAELHRREPRPMKPSAD
HHHHHCCCCCCCCCCCCCCCHHHHHCCHHCCCCCHHHHHHCCCHHHHHHCCCCCCCCCCH
ALAGAPLESKPQDAAPAGGNTFEAWKANAFVETAKDPLSTFAADVDTASYTVSRRYLVNG
HHCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEC
QLPPASAVRVEEFVNYFKFRYAPPETGAFAVHLEGAPSPFDAKRHFLRVGVQGKVVSRSQ
CCCCHHHHHHHHHHHHHHEECCCCCCCEEEEEECCCCCCHHHHHHHEEECCCCEEECCCC
RKPAHLVFLVDTSGSMHSEDKLPLAREAIKVAVKNLNENDTVAIVTYAGNTRDVLPPTPA
CCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCC
TDAKSIHAALDSLTAGGGTAMGSGMELAYRHAVKKASGSVVSRVVVLTDGDANIGRNVSA
CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCH
NAMLDSIHKYTAEGVTLTTVGFGMGNYRDDLMEKLADKGNGNCFYVDSLREAKKVFETQL
HHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHH
TGTLEVIAKDVKFQVEFNPAAVRRYRLVGYENRDVADHDFRNDKVDAGEIGAGHNVTAVY
HHHHHHHEECEEEEEEECHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
EVELTGEATEALATVRVRAKAPNGTEASEREFRFERTKLRDTLAQASPDFRFAVAVAATA
EEEECCCHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHH
DVLRDSPSAEGWSLATAEKLAEGATEGDADRKEFVRLVTQARALKGASVRGR
HHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]