| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108763310
Identifier: 108763310
GI number: 108763310
Start: 6808353
End: 6809249
Strand: Reverse
Name: 108763310
Synonym: MXAN_5469
Alternate gene names: NA
Gene position: 6809249-6808353 (Counterclockwise)
Preceding gene: 108760060
Following gene: 108757536
Centisome position: 74.5
GC content: 69.23
Gene sequence:
>897_bases ATGCAACTGTTCCTGACGGGCGCGAGCGGCTTCATCGGCGGCTCCCTTGCTCATTCGCTGAAGGCCCGCGGCCACGCCAT CCGAGGGCTGGTCAGGGACAAGGTGAAGGCGGAGCGGCTGGCGGCGCTCGGCATCGAGCCCGTGCTGGGTGACTTGGAGG ACCGCGCGCTGCTGACAGCTGAGGCGCGGCGCGCGGACGCGGTCATCAACGCGGCCAGCAGTGACCACGCGGAGGCCGTC GAGGCGCTCCTGGCGGGGCTGCGCGGCTCTGGCAAGCCGCTGCTCCACACCAGTGGTTCCAGCGTGATTGGCGACGACGT TCGAGGCGAGGTGCTCTCCGACAAGGTGTTCGACGAGGACACCCCCTTCATCGTCGAGCCCGACAAGCGGGCCCGTCACG CGGTCGACACCAGCGTGCTCGCCGCCGAGGGAATGCGCGGCATCGTCCTGTGCAACACGATGATTTATGGCACGGGCACC GGGCTCAGCCCGGACAGCGTGCAGATTCCCCCGCTGGTGAAGCAGGCGCGCAAGAGCGGCGTGGTGCGCATCGTCGGCAA GGGCGTCAACCGCTGGTCCAACGTGCACATCGACGACGTGGTGGCGCTGTACCTGCTTGCCTTGGAGCGCGCGCCCGCCG GGGCCTTCTACTTCGTGGAGAACGGCGAGGCCTCCTACGCGGAGATTGGTGCCGCCATCGCCCAGCGGCTCGGGCTGGGG CCCGTGCAATCCTGGTCGGTGGAGGAAGCCAGCCGCGAATGGGGTGAAGGCCACGCGCGCTACTCCTTCGGCTCGAACAG CCGCGTGCGTGGCAAGCGCGCGCGCCGCGAACTGGACTGGAAGCCCCGGCACGACTCCGTCACGGCGTGGATTCGCGACG AGATGCCGCTCGGTTGA
Upstream 100 bases:
>100_bases GCCCAGAAGTCACCGAAGCTGACGGCGGTCCGTTGAAGCGGGCGGCGTTTCCTGGGAGGAATGCGCAGACTGCACGCATC ACTGAACCTGGAGGTCATCC
Downstream 100 bases:
>100_bases GTGCTAGTTCCAGGGGAAGAGGGGACCCCAGACGGAGTGCGAGCTCAGCGCGATGGGGAGCTTGAGCGTCAACACCAGCC CCACCTCGCGGGCATGCCGC
Product: male sterility protein-like protein
Products: NA
Alternate protein names: Oxidoreductase; NAD Dependent Epimerase/Dehydratase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Nucleoside-Diphosphate-Sugar Epimerase; Polysaccharide Synthesis Protein; Epimerase/Dehydratase; NAD Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase Dehydratase Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Dyhydroflavanol-4-Reductase; NAD-Dependent Epimerase/Dehydratase Family Protein; UDP-Glucose 4-Epimerase; Dyhydroflavanol-4-Reductas; Dehydratase; Methyltransferase FkbM; Nucleoside-Diphosphate-Sugar Epimerases; NAD Dependent Epimerase/Dehydratase Family; Signal Peptide; Male Sterility Protein-Like Protein; 3-Beta Hydroxysteroid Dehydrogenase; Hopanoid-Associated Sugar Epimerase; Dihydrokaempferol 4-Reductase
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MQLFLTGASGFIGGSLAHSLKARGHAIRGLVRDKVKAERLAALGIEPVLGDLEDRALLTAEARRADAVINAASSDHAEAV EALLAGLRGSGKPLLHTSGSSVIGDDVRGEVLSDKVFDEDTPFIVEPDKRARHAVDTSVLAAEGMRGIVLCNTMIYGTGT GLSPDSVQIPPLVKQARKSGVVRIVGKGVNRWSNVHIDDVVALYLLALERAPAGAFYFVENGEASYAEIGAAIAQRLGLG PVQSWSVEEASREWGEGHARYSFGSNSRVRGKRARRELDWKPRHDSVTAWIRDEMPLG
Sequences:
>Translated_298_residues MQLFLTGASGFIGGSLAHSLKARGHAIRGLVRDKVKAERLAALGIEPVLGDLEDRALLTAEARRADAVINAASSDHAEAV EALLAGLRGSGKPLLHTSGSSVIGDDVRGEVLSDKVFDEDTPFIVEPDKRARHAVDTSVLAAEGMRGIVLCNTMIYGTGT GLSPDSVQIPPLVKQARKSGVVRIVGKGVNRWSNVHIDDVVALYLLALERAPAGAFYFVENGEASYAEIGAAIAQRLGLG PVQSWSVEEASREWGEGHARYSFGSNSRVRGKRARRELDWKPRHDSVTAWIRDEMPLG >Mature_298_residues MQLFLTGASGFIGGSLAHSLKARGHAIRGLVRDKVKAERLAALGIEPVLGDLEDRALLTAEARRADAVINAASSDHAEAV EALLAGLRGSGKPLLHTSGSSVIGDDVRGEVLSDKVFDEDTPFIVEPDKRARHAVDTSVLAAEGMRGIVLCNTMIYGTGT GLSPDSVQIPPLVKQARKSGVVRIVGKGVNRWSNVHIDDVVALYLLALERAPAGAFYFVENGEASYAEIGAAIAQRLGLG PVQSWSVEEASREWGEGHARYSFGSNSRVRGKRARRELDWKPRHDSVTAWIRDEMPLG
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322972, Length=318, Percent_Identity=28.3018867924528, Blast_Score=96, Evalue=7e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31950; Mature: 31950
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLFLTGASGFIGGSLAHSLKARGHAIRGLVRDKVKAERLAALGIEPVLGDLEDRALLTA CEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEEHH EARRADAVINAASSDHAEAVEALLAGLRGSGKPLLHTSGSSVIGDDVRGEVLSDKVFDED HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCEECCCCCCHHHHHHHCCCC TPFIVEPDKRARHAVDTSVLAAEGMRGIVLCNTMIYGTGTGLSPDSVQIPPLVKQARKSG CCEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCEECCHHHHHHHHCC VVRIVGKGVNRWSNVHIDDVVALYLLALERAPAGAFYFVENGEASYAEIGAAIAQRLGLG EEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCC PVQSWSVEEASREWGEGHARYSFGSNSRVRGKRARRELDWKPRHDSVTAWIRDEMPLG CCCCCCHHHHHHHHCCCCEEEECCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure MQLFLTGASGFIGGSLAHSLKARGHAIRGLVRDKVKAERLAALGIEPVLGDLEDRALLTA CEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEEHH EARRADAVINAASSDHAEAVEALLAGLRGSGKPLLHTSGSSVIGDDVRGEVLSDKVFDED HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCEECCCCCCHHHHHHHCCCC TPFIVEPDKRARHAVDTSVLAAEGMRGIVLCNTMIYGTGTGLSPDSVQIPPLVKQARKSG CCEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCEECCHHHHHHHHCC VVRIVGKGVNRWSNVHIDDVVALYLLALERAPAGAFYFVENGEASYAEIGAAIAQRLGLG EEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCC PVQSWSVEEASREWGEGHARYSFGSNSRVRGKRARRELDWKPRHDSVTAWIRDEMPLG CCCCCCHHHHHHHHCCCCEEEECCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA