| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108763265
Identifier: 108763265
GI number: 108763265
Start: 6007095
End: 6008462
Strand: Direct
Name: 108763265
Synonym: MXAN_4802
Alternate gene names: NA
Gene position: 6007095-6008462 (Clockwise)
Preceding gene: 108761628
Following gene: 108762493
Centisome position: 65.72
GC content: 69.66
Gene sequence:
>1368_bases ATGAAGTCCGTGCAGCGAGTCGTCTGGTCGGAGGGCATGTTCATGAGCCCCCACCACCTCCAGCAGCAGGACCTCTACCA CGAGCAACTGCTGGATCAGCGGCTGGCCTCGCTCGAACCGTATCCCTGGGGCGTCGTGGCCCTGGAGTTCGACATGGAGG CGCTGCGCGCCGGCCAGGTGCAGCTGACCCACTTCACCGGCATCCTCCCCGACGGGCTGCCGGTCTCCTTCGAGTCCGGA GACGCGGAGGCGCCGCCCGCTCGGCCCGCGGATGGCTACTTCCCGCCCGCCCAGCGCACCCTGGACGTGTACCTGGGCGT GCCGCGCGAACGCAGCGGCGTGGAGAGCTTCGGCAGCGGGGAGCGGCTGGGCAGCAGCCCGCGCTACACCCCCGCCTCCC GCCCCGTCAGTGATTTGACGGCCTCCACCTCCATCTCGCAGGTGGCCTTCGGTCAGCGCAACGTGCGCCTGCTGTTCGGC ACCGAGCCGCGCGACGACTTCGAGTCCATCAAGCTGTGCGAGCTGTCCCGCGACCGCTCCGGCAACCTGATGCTGGTGGA GTCCTTCATCCCGCCGTGCCTGCGCATCGACGCGTCCCCGTTCGTCATGAACGAGCTGCGGACGATGTTGCGGCTGATGG TGTCCAAGCAGCGGCAGTTGTCCTCGCGGCGGCGGCACCGGGACGCCTCGGCGCTGGAGTTCACCGCGGGCGACGTGACG CTCTTCCTGGAGCTCAACGCGCTCAACGGCACCATCCCCTTCATCCAGCACGCGCTGGACGCGGGCAACCTGCGGCCCAG GGACTTGTACCTGGCGCTGGCGCAGTGCGCGGGGCAATTGTGCACCTTCTCCGTCAGCGCGGACCCGTCCACGCTGCCCA CCTTCCAGTTCACCAACCTGCGCGCCACCTTCGAGGAGCTGTTCCGCCGCCTCTCCGAGCTGATGCGCGCGGTGGCGCTG GAGCAGTGCCTGTCGGTGGACCTGACGGCGGGCGCAGACGGCATGTTCCGCGGCCGGCTGGAGGACGACCGGCTGGAGCG CTGCGGCCACTTCATCCTCGCGGTGCGCAGCGAGCTGCCGGAGCGGGTGGTGGCCGAGCAGCTCCCCAAGCTGTCGAAGG TGGCCGCCTGGGAGGACATCCGCGCGCTGGTGCAGGCCGCCGCGCCCGGCGTGCCGCTGGCGGTGACGTACCGGCCACCG CCCGAAGTCCCCGTGCAGCCAGGCACCGTCTACTTCAGCCTCTCCATGAATGACGGCTACTGGAGGAACGTGATGCGGGA CCGCAACCTCGCCATCTACCTCCCGCAGCCGTTCGACGCGAACCGAACGACCGTGGAACTGCTCGCGGTTCCCACCGCCA ATCGCTGA
Upstream 100 bases:
>100_bases AAGGCTATCAGATTGACCTGATGTTCCGGCCCATGACGCAGGCGCCGGAGCCTCGACTCCAACCCCAAGCAGGCGACGGC GTGTCGCCGCGGAGAGGTGT
Downstream 100 bases:
>100_bases CGCCCCGAGCCGCCCATGGACCGAGTCACCGAAGCCACGAAGGATTGTTTCGACGCCGCCATCCAACTGCGCGGCTCCGA AGCCTCGGCGGTGCCCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Type VI Secretion Protein Family; Protein ImpJ/VasE; T6ss M; Conserved Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein EvpM; Protein ImpJ; Type VI Secretion System Protein; Type VI Secretion System Protein ImpJ; Type VI Secretion; Type VI Secretion System Core Protein; Type VI Secretion Protein VasE; Temperature-Dependent Protein Secretion ImpJ
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MKSVQRVVWSEGMFMSPHHLQQQDLYHEQLLDQRLASLEPYPWGVVALEFDMEALRAGQVQLTHFTGILPDGLPVSFESG DAEAPPARPADGYFPPAQRTLDVYLGVPRERSGVESFGSGERLGSSPRYTPASRPVSDLTASTSISQVAFGQRNVRLLFG TEPRDDFESIKLCELSRDRSGNLMLVESFIPPCLRIDASPFVMNELRTMLRLMVSKQRQLSSRRRHRDASALEFTAGDVT LFLELNALNGTIPFIQHALDAGNLRPRDLYLALAQCAGQLCTFSVSADPSTLPTFQFTNLRATFEELFRRLSELMRAVAL EQCLSVDLTAGADGMFRGRLEDDRLERCGHFILAVRSELPERVVAEQLPKLSKVAAWEDIRALVQAAAPGVPLAVTYRPP PEVPVQPGTVYFSLSMNDGYWRNVMRDRNLAIYLPQPFDANRTTVELLAVPTANR
Sequences:
>Translated_455_residues MKSVQRVVWSEGMFMSPHHLQQQDLYHEQLLDQRLASLEPYPWGVVALEFDMEALRAGQVQLTHFTGILPDGLPVSFESG DAEAPPARPADGYFPPAQRTLDVYLGVPRERSGVESFGSGERLGSSPRYTPASRPVSDLTASTSISQVAFGQRNVRLLFG TEPRDDFESIKLCELSRDRSGNLMLVESFIPPCLRIDASPFVMNELRTMLRLMVSKQRQLSSRRRHRDASALEFTAGDVT LFLELNALNGTIPFIQHALDAGNLRPRDLYLALAQCAGQLCTFSVSADPSTLPTFQFTNLRATFEELFRRLSELMRAVAL EQCLSVDLTAGADGMFRGRLEDDRLERCGHFILAVRSELPERVVAEQLPKLSKVAAWEDIRALVQAAAPGVPLAVTYRPP PEVPVQPGTVYFSLSMNDGYWRNVMRDRNLAIYLPQPFDANRTTVELLAVPTANR >Mature_455_residues MKSVQRVVWSEGMFMSPHHLQQQDLYHEQLLDQRLASLEPYPWGVVALEFDMEALRAGQVQLTHFTGILPDGLPVSFESG DAEAPPARPADGYFPPAQRTLDVYLGVPRERSGVESFGSGERLGSSPRYTPASRPVSDLTASTSISQVAFGQRNVRLLFG TEPRDDFESIKLCELSRDRSGNLMLVESFIPPCLRIDASPFVMNELRTMLRLMVSKQRQLSSRRRHRDASALEFTAGDVT LFLELNALNGTIPFIQHALDAGNLRPRDLYLALAQCAGQLCTFSVSADPSTLPTFQFTNLRATFEELFRRLSELMRAVAL EQCLSVDLTAGADGMFRGRLEDDRLERCGHFILAVRSELPERVVAEQLPKLSKVAAWEDIRALVQAAAPGVPLAVTYRPP PEVPVQPGTVYFSLSMNDGYWRNVMRDRNLAIYLPQPFDANRTTVELLAVPTANR
Specific function: Unknown
COG id: COG3522
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50795; Mature: 50795
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSVQRVVWSEGMFMSPHHLQQQDLYHEQLLDQRLASLEPYPWGVVALEFDMEALRAGQV CCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHCCCE QLTHFTGILPDGLPVSFESGDAEAPPARPADGYFPPAQRTLDVYLGVPRERSGVESFGSG EEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHCEEEEEECCCCCCCCCHHCCCC ERLGSSPRYTPASRPVSDLTASTSISQVAFGQRNVRLLFGTEPRDDFESIKLCELSRDRS CCCCCCCCCCCCCCCHHHHHHHCCHHHHHCCCCCEEEEECCCCCCCHHHEEHEECCCCCC GNLMLVESFIPPCLRIDASPFVMNELRTMLRLMVSKQRQLSSRRRHRDASALEFTAGDVT CCEEEEHHHCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEE LFLELNALNGTIPFIQHALDAGNLRPRDLYLALAQCAGQLCTFSVSADPSTLPTFQFTNL EEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEECHH RATFEELFRRLSELMRAVALEQCLSVDLTAGADGMFRGRLEDDRLERCGHFILAVRSELP HHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCEECCCCHHHHHHHHHHHHHHHHHCH ERVVAEQLPKLSKVAAWEDIRALVQAAAPGVPLAVTYRPPPEVPVQPGTVYFSLSMNDGY HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCH WRNVMRDRNLAIYLPQPFDANRTTVELLAVPTANR HHHHHCCCCEEEEECCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure MKSVQRVVWSEGMFMSPHHLQQQDLYHEQLLDQRLASLEPYPWGVVALEFDMEALRAGQV CCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHCCCE QLTHFTGILPDGLPVSFESGDAEAPPARPADGYFPPAQRTLDVYLGVPRERSGVESFGSG EEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHCEEEEEECCCCCCCCCHHCCCC ERLGSSPRYTPASRPVSDLTASTSISQVAFGQRNVRLLFGTEPRDDFESIKLCELSRDRS CCCCCCCCCCCCCCCHHHHHHHCCHHHHHCCCCCEEEEECCCCCCCHHHEEHEECCCCCC GNLMLVESFIPPCLRIDASPFVMNELRTMLRLMVSKQRQLSSRRRHRDASALEFTAGDVT CCEEEEHHHCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEE LFLELNALNGTIPFIQHALDAGNLRPRDLYLALAQCAGQLCTFSVSADPSTLPTFQFTNL EEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEECHH RATFEELFRRLSELMRAVALEQCLSVDLTAGADGMFRGRLEDDRLERCGHFILAVRSELP HHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCEECCCCHHHHHHHHHHHHHHHHHCH ERVVAEQLPKLSKVAAWEDIRALVQAAAPGVPLAVTYRPPPEVPVQPGTVYFSLSMNDGY HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCH WRNVMRDRNLAIYLPQPFDANRTTVELLAVPTANR HHHHHCCCCEEEEECCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA