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The map label for this gene is yebA [C]

Identifier: 108762950

GI number: 108762950

Start: 4137803

End: 4138969

Strand: Reverse

Name: yebA [C]

Synonym: MXAN_3554

Alternate gene names: 108762950

Gene position: 4138969-4137803 (Counterclockwise)

Preceding gene: 108757141

Following gene: 108758333

Centisome position: 45.29

GC content: 68.72

Gene sequence:

>1167_bases
TTGGCTTGCGCGACACCACACCAGACGGGCAGGAAGACGGTCCGGACGAATAGACCGCGAGGAAGCGGAATTCCGCTTCG
CGCGCGTCGGTTCCGGGCCCGCCCACCCATTCCAACTCAGGGAGCTTGTATGCGGCCGAACCTTCCCACACTCGGTGCCC
CTCCGAAGCGCAGTCCCTTCGGCACGGTGGTCGCCGTGTCACTCATCCTCGGCGGTGCCGCCGGCGGCGTGTGGTGGTGG
AAGCAGCGGATGGTTCAGGCGACGGAAGAGGCCGCGGCGCAGATGCCCAACGCAGTTCCCGACGCAGGCGCCGTCGCCGC
GGCGCCCACGCCGGCGCCCGTGGCCACGGACCCGGTGAAGGCCGCGGGCCTGGAGCGCATATCGGTGAGCATCAACGGCC
CCCTGGAGACCGCGCTCGTCAACGCCGCTGGCTCGGACGTGGGTCCGGCGCTGGCGCAGGTGGTGACGCGCACCCTGGTG
TGGTGGGTCTCCGTGCCCGGGGAGATTCTCCGCGGTGACACGCTGGAGGTGCTCTACCAGCGCCGCACCAACGAGGAGCC
CCTGGTGCAGGCGGTGCGCTTCACCAGCGCCAAGCTGGGCAAGACAATGAGCGCGTACCGCTACCATGCCAACGGCGAGC
CCAATGCCCGGTACTACCTGTCCGGCGGCGACGAGCTGGAGCTGAGGCTGGAGCGCTCCCCCATCGACGACTACGAGCAG
GTGACGTCCCTGCTTCGCGATGGCCGCAAGCACAAGGGCGTGGACTTCCGCACCCCGGTCGGCACGCCCATCAAGGCCCC
CTTCAACGGCGTGGTGAAGCGGAAGAACTGGAACTTCAGCAGCAACGGCAACTGCATCGAGTTGGTGGAGTCGGGCGGCA
AGGGGCGCCGCGCGCTCTTCCTCCACCTGGACGAGGTGGACAAGAGCGTCAAGCCGGGCACCCGGTTCTCCGTGGGGCAA
GTCATCGCCAAGAGCGGCAACACAGGCCGCAGCTTCGCCCCCCACCTCCACTACCAGCTCATGACGCAGGATGACCGGGT
GCTGGACCCCTACGACCAGCACAAGACCTACCGCCGCTCACTGGCCGCGCAGCACCGGTCGGGTTTCGAGGCGGAGGTGC
GCCGCATGGACGGGTTGCTGAGCGCGTCCGTGGTGGCCGGCAAGTAA

Upstream 100 bases:

>100_bases
CTCATCGTGAAGAAGCTCGAGGAGACGGGTGGCAACGTCACCCGGGCCGCTCGGTTGCTTCAAATCAGCCGCAAGTCACT
CCAGACGAAGATGAAGGAGT

Downstream 100 bases:

>100_bases
AAGCCACCCGTTTCTTGACACTCCTTCGACGGCACGGCTAGCTGGAAGCCCCCCGGGCTTGCCGGAAGGCCGGGGAGATT
TGCCGTCGGAGGTCGGATGC

Product: M23 peptidase domain-containing protein

Products: NA

Alternate protein names: Staphylolytic enzyme ALE-1 [H]

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MACATPHQTGRKTVRTNRPRGSGIPLRARRFRARPPIPTQGACMRPNLPTLGAPPKRSPFGTVVAVSLILGGAAGGVWWW
KQRMVQATEEAAAQMPNAVPDAGAVAAAPTPAPVATDPVKAAGLERISVSINGPLETALVNAAGSDVGPALAQVVTRTLV
WWVSVPGEILRGDTLEVLYQRRTNEEPLVQAVRFTSAKLGKTMSAYRYHANGEPNARYYLSGGDELELRLERSPIDDYEQ
VTSLLRDGRKHKGVDFRTPVGTPIKAPFNGVVKRKNWNFSSNGNCIELVESGGKGRRALFLHLDEVDKSVKPGTRFSVGQ
VIAKSGNTGRSFAPHLHYQLMTQDDRVLDPYDQHKTYRRSLAAQHRSGFEAEVRRMDGLLSASVVAGK

Sequences:

>Translated_388_residues
MACATPHQTGRKTVRTNRPRGSGIPLRARRFRARPPIPTQGACMRPNLPTLGAPPKRSPFGTVVAVSLILGGAAGGVWWW
KQRMVQATEEAAAQMPNAVPDAGAVAAAPTPAPVATDPVKAAGLERISVSINGPLETALVNAAGSDVGPALAQVVTRTLV
WWVSVPGEILRGDTLEVLYQRRTNEEPLVQAVRFTSAKLGKTMSAYRYHANGEPNARYYLSGGDELELRLERSPIDDYEQ
VTSLLRDGRKHKGVDFRTPVGTPIKAPFNGVVKRKNWNFSSNGNCIELVESGGKGRRALFLHLDEVDKSVKPGTRFSVGQ
VIAKSGNTGRSFAPHLHYQLMTQDDRVLDPYDQHKTYRRSLAAQHRSGFEAEVRRMDGLLSASVVAGK
>Mature_387_residues
ACATPHQTGRKTVRTNRPRGSGIPLRARRFRARPPIPTQGACMRPNLPTLGAPPKRSPFGTVVAVSLILGGAAGGVWWWK
QRMVQATEEAAAQMPNAVPDAGAVAAAPTPAPVATDPVKAAGLERISVSINGPLETALVNAAGSDVGPALAQVVTRTLVW
WVSVPGEILRGDTLEVLYQRRTNEEPLVQAVRFTSAKLGKTMSAYRYHANGEPNARYYLSGGDELELRLERSPIDDYEQV
TSLLRDGRKHKGVDFRTPVGTPIKAPFNGVVKRKNWNFSSNGNCIELVESGGKGRRALFLHLDEVDKSVKPGTRFSVGQV
IAKSGNTGRSFAPHLHYQLMTQDDRVLDPYDQHKTYRRSLAAQHRSGFEAEVRRMDGLLSASVVAGK

Specific function: Lyses staphylococcal cells by hydrolyzing the polyglycine interpeptide bridges of the peptidoglycan [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR003646
- InterPro:   IPR013667 [H]

Pfam domain/function: PF01551 Peptidase_M23; PF08460 SH3_5 [H]

EC number: =3.4.24.75 [H]

Molecular weight: Translated: 42154; Mature: 42022

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MACATPHQTGRKTVRTNRPRGSGIPLRARRFRARPPIPTQGACMRPNLPTLGAPPKRSPF
CCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCC
GTVVAVSLILGGAAGGVWWWKQRMVQATEEAAAQMPNAVPDAGAVAAAPTPAPVATDPVK
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
AAGLERISVSINGPLETALVNAAGSDVGPALAQVVTRTLVWWVSVPGEILRGDTLEVLYQ
HCCCEEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHH
RRTNEEPLVQAVRFTSAKLGKTMSAYRYHANGEPNARYYLSGGDELELRLERSPIDDYEQ
HCCCCCHHHHHHHHHHHHHHCHHHHHEEECCCCCCCEEEECCCCEEEEEEECCCCCCHHH
VTSLLRDGRKHKGVDFRTPVGTPIKAPFNGVVKRKNWNFSSNGNCIELVESGGKGRRALF
HHHHHHCCHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCEEEE
LHLDEVDKSVKPGTRFSVGQVIAKSGNTGRSFAPHLHYQLMTQDDRVLDPYDQHKTYRRS
EEEHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHH
LAAQHRSGFEAEVRRMDGLLSASVVAGK
HHHHHHCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ACATPHQTGRKTVRTNRPRGSGIPLRARRFRARPPIPTQGACMRPNLPTLGAPPKRSPF
CCCCCCCCCCHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCC
GTVVAVSLILGGAAGGVWWWKQRMVQATEEAAAQMPNAVPDAGAVAAAPTPAPVATDPVK
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
AAGLERISVSINGPLETALVNAAGSDVGPALAQVVTRTLVWWVSVPGEILRGDTLEVLYQ
HCCCEEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHH
RRTNEEPLVQAVRFTSAKLGKTMSAYRYHANGEPNARYYLSGGDELELRLERSPIDDYEQ
HCCCCCHHHHHHHHHHHHHHCHHHHHEEECCCCCCCEEEECCCCEEEEEEECCCCCCHHH
VTSLLRDGRKHKGVDFRTPVGTPIKAPFNGVVKRKNWNFSSNGNCIELVESGGKGRRALF
HHHHHHCCHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCEEEE
LHLDEVDKSVKPGTRFSVGQVIAKSGNTGRSFAPHLHYQLMTQDDRVLDPYDQHKTYRRS
EEEHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHH
LAAQHRSGFEAEVRRMDGLLSASVVAGK
HHHHHHCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023202 [H]