| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is zraS [H]
Identifier: 108762891
GI number: 108762891
Start: 4206674
End: 4208824
Strand: Reverse
Name: zraS [H]
Synonym: MXAN_3606
Alternate gene names: 108762891
Gene position: 4208824-4206674 (Counterclockwise)
Preceding gene: 108756823
Following gene: 108762518
Centisome position: 46.05
GC content: 53.0
Gene sequence:
>2151_bases ATGCTGACTGGCCCACTTTCTGGAAACGGCCTGCCTCAATCCTGCGCTAGTGTCACTCTCATGGCAACCCTGCAAGGGCA GCACGTCTTTCGTCCTAGAGCTCGTGTCCTACGACTCCTCGGTGAAGAACTAATCAGCGACGAAACCATTGCCGTCGTCG AGCTAGTCAGGAATGCATGGGACGCAGATGCGCTAAGCGTCAAGGTCGCATTTCACAATGCCCAAAATGCACTTGGCGGA AGTCTTGACATCATTGATGACGGACACGGCATGTCGAAAGAGACCGTCCTTGGGTCATGGCTCCAACCTGCTACCCCGGA CAAGAAACTTCGGCATGCATCTCCATCAGGACGGCCGCTTCTTGGCAAGAAGGGCATTGGTCGCTTTGCCGCTGATAAAC TCGCTAGAAAGCTAGTACTCATCACAAAGAAAGAGGGAGAGACGACAGCAACAAGAGCGGTCGTCGACTGGAATCAGTTC GACGATCCTATGAAGTTTCTCGACGAAATCCATCCACAGATTGACTCCCATCCAACCCCTGCCACTGGCCATGGCACCAG TCTATTCCTCCAAGACCTCCGCAGCTCTTGGTCCGAAGACAGAATCGCCCATCTCAAATTAGAACTATTAAAGCTATTTC CTCCATTCAGATCCACAGAAGTTCTGGGCAGCCCTGTGATACCTCCAGCGCTTGCCACGTTCCAGGTAAAGCTGGAGGTT GATGGGATTTCCGAGGACATAGGCCATTTTCCGCAGTCACTCAGGACACTCTGTCCTTGGCGAGTGAGGGCTGTCGTTCG CGCACACAGCCCAACCGAAGACGAAATTGCAATTGCAATCAATAATGAGCCCGAGCGCGTGCGACCCCTTGGCGGAGGAG CAAAGGGAAAGAAGAGCGCAGCCGGCCATTTTGCCGTTGAAATCGACGTCTGGGTCAGAAGCGCAGAAGGACTGGCTGGT ATTCGCGAGACACTGGATCTCTCGCTTCAAGAGGCCAGAGGACTGCTTGATAAGTGGTCGGGAATTTCAGTCTATAGAGA CGGCTTCCGCGTCTTCCCTTATGGCGAACCAGGTAACGATTGGCTCGACCTCGACAAAGAGCGAATCAACACGCCCAAAG AGAGGCTCAGCAACAGCCAAATCATTGGATGCATCTACCTAAGCGAGCAAGACAACCCAGAACTTCGCGATCAGACCAAT CGCCAAGGCTTGGTAAACAATGACGCCTTCAACGATCTTCGCTCAGCGATCAGGCAGGTCATCAGAGAGATCGAAAACCG AATACTCGTCGACAAGCCGACCACCAAGCAACGCCGATCCGGGAGGCGGCTCTTTGAACTGGAAAGTCTCAAGCGCTTGC GGGAAATAGCGGAAACATCAAAATCAGTTGCAAGCACGCAAGTCCTCGCAATGATTGGCGCAGCAGAGGCAGAAAAATCG TCCGCAGAAGAAACGATTTCGCAAGAAATTTCAAGATATCGTCGAATCCTAAGCCTATCAGTAGTAGCAACTCGGATGGC TCATGAAATCAGGCAGCAGGTCGACATTATCCGCCGAGCGATAGACAATGGCCTCAAGCGCCTAGCAAAAGCCTCCGTCA CTATTGTGGGTGTATCCGAAGCATTGGCACGTGCAGATGAATCGGCGGGCATCGTGGCTCGGGAAGTGCGCAGACTCCTT CCGTTCACGCGCGCACGCAGAAAGATTGAGAAGATCGACCTCAGCAGGCTAGCCATCGACATCCAAAGCGATTTCACTGA ACCAGCAAGCAAGAGAAACATTGAAATTAAATTTGCGTCACCGTCGAGTCCGGCAGAGGTCGAGGTAGACTATGGAGAGC TATATCAAGCCGTTAGAAACCTCGTCGACAATGCCTTGTTCTGGAGTCCAGAAGGAGGGCAAGTAACTCTCTCTGTTTTC GCAAAACACGGAAGTGCCTTCATAGCCGTCACCGACCAAGGACCCGGTGTGCCTACCGAGGATGAGGGCGTCATCTTCGA GCCGTATTGGTCGACCAAGCCCAACGGCTCCGGATTGGGCCTGCCGATCGCGGGCGAAATCGCTGCCGATTACGGAGGGA GTTTGAGCCTGAAGAAAAGTAGCACGATCGCTGGTGCATCATTTGAGATTGCAATTCCGCGTGCAAAATGA
Upstream 100 bases:
>100_bases CTGCTCTCGCCCTCAAGGCGTCGTCAGCTCGGCACGTCAGCCGAGGCGACTTCTTCCCTGACCCAGGGGGGGGGTACATT CCGACAGCGAGCCAAGTTAG
Downstream 100 bases:
>100_bases AACCTACCGAAAGAATCCTGGTAATCGACGACGATTCAGCATACGGAGCAACGGTCAAGGAATCGCTGGAATTGGATGAC TACGAGGTCCAAGTCCGTGA
Product: putative sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 716; Mature: 716
Protein sequence:
>716_residues MLTGPLSGNGLPQSCASVTLMATLQGQHVFRPRARVLRLLGEELISDETIAVVELVRNAWDADALSVKVAFHNAQNALGG SLDIIDDGHGMSKETVLGSWLQPATPDKKLRHASPSGRPLLGKKGIGRFAADKLARKLVLITKKEGETTATRAVVDWNQF DDPMKFLDEIHPQIDSHPTPATGHGTSLFLQDLRSSWSEDRIAHLKLELLKLFPPFRSTEVLGSPVIPPALATFQVKLEV DGISEDIGHFPQSLRTLCPWRVRAVVRAHSPTEDEIAIAINNEPERVRPLGGGAKGKKSAAGHFAVEIDVWVRSAEGLAG IRETLDLSLQEARGLLDKWSGISVYRDGFRVFPYGEPGNDWLDLDKERINTPKERLSNSQIIGCIYLSEQDNPELRDQTN RQGLVNNDAFNDLRSAIRQVIREIENRILVDKPTTKQRRSGRRLFELESLKRLREIAETSKSVASTQVLAMIGAAEAEKS SAEETISQEISRYRRILSLSVVATRMAHEIRQQVDIIRRAIDNGLKRLAKASVTIVGVSEALARADESAGIVAREVRRLL PFTRARRKIEKIDLSRLAIDIQSDFTEPASKRNIEIKFASPSSPAEVEVDYGELYQAVRNLVDNALFWSPEGGQVTLSVF AKHGSAFIAVTDQGPGVPTEDEGVIFEPYWSTKPNGSGLGLPIAGEIAADYGGSLSLKKSSTIAGASFEIAIPRAK
Sequences:
>Translated_716_residues MLTGPLSGNGLPQSCASVTLMATLQGQHVFRPRARVLRLLGEELISDETIAVVELVRNAWDADALSVKVAFHNAQNALGG SLDIIDDGHGMSKETVLGSWLQPATPDKKLRHASPSGRPLLGKKGIGRFAADKLARKLVLITKKEGETTATRAVVDWNQF DDPMKFLDEIHPQIDSHPTPATGHGTSLFLQDLRSSWSEDRIAHLKLELLKLFPPFRSTEVLGSPVIPPALATFQVKLEV DGISEDIGHFPQSLRTLCPWRVRAVVRAHSPTEDEIAIAINNEPERVRPLGGGAKGKKSAAGHFAVEIDVWVRSAEGLAG IRETLDLSLQEARGLLDKWSGISVYRDGFRVFPYGEPGNDWLDLDKERINTPKERLSNSQIIGCIYLSEQDNPELRDQTN RQGLVNNDAFNDLRSAIRQVIREIENRILVDKPTTKQRRSGRRLFELESLKRLREIAETSKSVASTQVLAMIGAAEAEKS SAEETISQEISRYRRILSLSVVATRMAHEIRQQVDIIRRAIDNGLKRLAKASVTIVGVSEALARADESAGIVAREVRRLL PFTRARRKIEKIDLSRLAIDIQSDFTEPASKRNIEIKFASPSSPAEVEVDYGELYQAVRNLVDNALFWSPEGGQVTLSVF AKHGSAFIAVTDQGPGVPTEDEGVIFEPYWSTKPNGSGLGLPIAGEIAADYGGSLSLKKSSTIAGASFEIAIPRAK >Mature_716_residues MLTGPLSGNGLPQSCASVTLMATLQGQHVFRPRARVLRLLGEELISDETIAVVELVRNAWDADALSVKVAFHNAQNALGG SLDIIDDGHGMSKETVLGSWLQPATPDKKLRHASPSGRPLLGKKGIGRFAADKLARKLVLITKKEGETTATRAVVDWNQF DDPMKFLDEIHPQIDSHPTPATGHGTSLFLQDLRSSWSEDRIAHLKLELLKLFPPFRSTEVLGSPVIPPALATFQVKLEV DGISEDIGHFPQSLRTLCPWRVRAVVRAHSPTEDEIAIAINNEPERVRPLGGGAKGKKSAAGHFAVEIDVWVRSAEGLAG IRETLDLSLQEARGLLDKWSGISVYRDGFRVFPYGEPGNDWLDLDKERINTPKERLSNSQIIGCIYLSEQDNPELRDQTN RQGLVNNDAFNDLRSAIRQVIREIENRILVDKPTTKQRRSGRRLFELESLKRLREIAETSKSVASTQVLAMIGAAEAEKS SAEETISQEISRYRRILSLSVVATRMAHEIRQQVDIIRRAIDNGLKRLAKASVTIVGVSEALARADESAGIVAREVRRLL PFTRARRKIEKIDLSRLAIDIQSDFTEPASKRNIEIKFASPSSPAEVEVDYGELYQAVRNLVDNALFWSPEGGQVTLSVF AKHGSAFIAVTDQGPGVPTEDEGVIFEPYWSTKPNGSGLGLPIAGEIAADYGGSLSLKKSSTIAGASFEIAIPRAK
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=234, Percent_Identity=25.6410256410256, Blast_Score=83, Evalue=7e-17, Organism=Escherichia coli, GI1790861, Length=131, Percent_Identity=32.824427480916, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 78619; Mature: 78619
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTGPLSGNGLPQSCASVTLMATLQGQHVFRPRARVLRLLGEELISDETIAVVELVRNAW CCCCCCCCCCCCHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCC DADALSVKVAFHNAQNALGGSLDIIDDGHGMSKETVLGSWLQPATPDKKLRHASPSGRPL CCCCEEEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCHHHHCCCCCCCCC LGKKGIGRFAADKLARKLVLITKKEGETTATRAVVDWNQFDDPMKFLDEIHPQIDSHPTP CCCCCCCHHHHHHHHHEEEEEEECCCCCCHHEEEECCCCCCCHHHHHHHHCHHHCCCCCC ATGHGTSLFLQDLRSSWSEDRIAHLKLELLKLFPPFRSTEVLGSPVIPPALATFQVKLEV CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCEEEEEEEEE DGISEDIGHFPQSLRTLCPWRVRAVVRAHSPTEDEIAIAINNEPERVRPLGGGAKGKKSA CCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEECCCCHHCCCCCCCCCCCCCC AGHFAVEIDVWVRSAEGLAGIRETLDLSLQEARGLLDKWSGISVYRDGFRVFPYGEPGND CCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEECCCCCCCC WLDLDKERINTPKERLSNSQIIGCIYLSEQDNPELRDQTNRQGLVNNDAFNDLRSAIRQV HHCCCHHHCCCCHHHCCCCCEEEEEEECCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHH IREIENRILVDKPTTKQRRSGRRLFELESLKRLREIAETSKSVASTQVLAMIGAAEAEKS HHHHHCCEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAEETISQEISRYRRILSLSVVATRMAHEIRQQVDIIRRAIDNGLKRLAKASVTIVGVSE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEHHH ALARADESAGIVAREVRRLLPFTRARRKIEKIDLSRLAIDIQSDFTEPASKRNIEIKFAS HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCCCCCCEEEEEECC PSSPAEVEVDYGELYQAVRNLVDNALFWSPEGGQVTLSVFAKHGSAFIAVTDQGPGVPTE CCCCCEEEECHHHHHHHHHHHHHHCEEECCCCCEEEEEEEECCCCEEEEEECCCCCCCCC DEGVIFEPYWSTKPNGSGLGLPIAGEIAADYGGSLSLKKSSTIAGASFEIAIPRAK CCCEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCEEEEECCCCC >Mature Secondary Structure MLTGPLSGNGLPQSCASVTLMATLQGQHVFRPRARVLRLLGEELISDETIAVVELVRNAW CCCCCCCCCCCCHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCC DADALSVKVAFHNAQNALGGSLDIIDDGHGMSKETVLGSWLQPATPDKKLRHASPSGRPL CCCCEEEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCHHHHCCCCCCCCC LGKKGIGRFAADKLARKLVLITKKEGETTATRAVVDWNQFDDPMKFLDEIHPQIDSHPTP CCCCCCCHHHHHHHHHEEEEEEECCCCCCHHEEEECCCCCCCHHHHHHHHCHHHCCCCCC ATGHGTSLFLQDLRSSWSEDRIAHLKLELLKLFPPFRSTEVLGSPVIPPALATFQVKLEV CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCEEEEEEEEE DGISEDIGHFPQSLRTLCPWRVRAVVRAHSPTEDEIAIAINNEPERVRPLGGGAKGKKSA CCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEECCCCHHCCCCCCCCCCCCCC AGHFAVEIDVWVRSAEGLAGIRETLDLSLQEARGLLDKWSGISVYRDGFRVFPYGEPGND CCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEECCCCCCCC WLDLDKERINTPKERLSNSQIIGCIYLSEQDNPELRDQTNRQGLVNNDAFNDLRSAIRQV HHCCCHHHCCCCHHHCCCCCEEEEEEECCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHH IREIENRILVDKPTTKQRRSGRRLFELESLKRLREIAETSKSVASTQVLAMIGAAEAEKS HHHHHCCEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAEETISQEISRYRRILSLSVVATRMAHEIRQQVDIIRRAIDNGLKRLAKASVTIVGVSE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEHHH ALARADESAGIVAREVRRLLPFTRARRKIEKIDLSRLAIDIQSDFTEPASKRNIEIKFAS HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCCCCCCEEEEEECC PSSPAEVEVDYGELYQAVRNLVDNALFWSPEGGQVTLSVFAKHGSAFIAVTDQGPGVPTE CCCCCEEEECHHHHHHHHHHHHHHCEEECCCCCEEEEEEEECCCCEEEEEECCCCCCCCC DEGVIFEPYWSTKPNGSGLGLPIAGEIAADYGGSLSLKKSSTIAGASFEIAIPRAK CCCEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 2666400; 11243806 [H]