| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762698
Identifier: 108762698
GI number: 108762698
Start: 5485659
End: 5486918
Strand: Direct
Name: 108762698
Synonym: MXAN_4435
Alternate gene names: NA
Gene position: 5485659-5486918 (Clockwise)
Preceding gene: 108763845
Following gene: 108757677
Centisome position: 60.02
GC content: 69.92
Gene sequence:
>1260_bases ATGAACACCTCCGCCACGGAGTTCGACATCATCGCCTGGGGGGCCACCGGCTTCACCGGGCGACTGGTCGCCGAATATCT CGCCAGGACCCAGGACAGCCACCGCGCACGGTGGGCCCTGGCGGGACGCGACCTCGACAAGCTGGAGAAGGTCCGGCAGG GGCTGGCGGCGATTGCGCCCTCCTTCGCGGAGCTACCGCTGCTCGTCGCGGATGCACGCGACGCCGCGTCGCTGGATGCC CTGGTCCCTCGCACCCGCGTGGTCTGCACCACGGTGGGCCCCTACGCACGTTACGGCAGCGAGCTCGTCGCGGCGTGTGT TCGGGCCGGCGTCAGCTACTGCGACCTGACGGGTGAAGTGCAGTGGATGCGGCGGATGATTGACGCCCACCACGAGCAGG CGCGGCAGAGCGGCGCACGCATCGTCCACACCTGTGGCTTCGACTCGATTCCGTCGGACCTGGGCGTGTTGATGATGCAG GAGCACATGCGGGAGCACCATGGCGGGCACCTGGAAGCAGTCCGCCTCTACATGGGTCCCATGCGCGGAGGCGCTAGCGG TGGCACGGCCGCGAGCATGGTGCAGGCGATGGAAGAAGCATCAACGGACCGCTCGGTGCGGCGAATCATGGCCCACCCGC ATGCGCTGGACCCCGTCCCAGGCCGCTGGCGACCCGAGTCCAAGGACGCGCTGGGCGTCCACTACAGCCAGGAACTGGGC CAGTGGACCGGCCCGTTCCTCATGGCGACCGTGAACACGCGCGTCGTCCGACGCAGCAATGCGCTGCTCGGTCACCCGTG GGGAGAGCACTTCCGGTACGCGGAGGTCGCCAGCTATGGCGCCGGGCCCAAGGGCCTGCTGCGCGCCACGGGCGTCACCG CGGGCCTGGGAGGCGTCGTCGCCGCGATGCAGGTGAAGCCCCTACGCACGCTGCTGGAGAAGAAGGTACTGCCCGCGCCG GGTGAAGGCCCGTCTCTGGAAGCCCGGGAGAAAGGCTTCTTCGTCGCGCAGCTTCGTGGCGAAGGCACCTCCCCCCGCAC GGGCAAGCAGGTGCGGCTGAAGGGCAAGGTGGCGGCGCAGGGAGACCCGGGCTACGCGGCCACGTCGCGGATGCTCGCCG AGTCCGCGCTGTGCCTCGCCTTCGACGACACTCCGACCACGGGCGGCGTGCTCACGCCGGCCTCCGCCATGGGCATGCGA CTGGTGGAGCGGCTGCGCCGTGCGGGCATGACGTTCGAAGTGGAGGAGCTGTCCACCTGA
Upstream 100 bases:
>100_bases GCCCGAAGAGGAGTAACCGGGGTAGCAATCTCCGCGGCGTGAACACTCGTTTCACGCCGCGGTTGCGGTGCCTTCGGGGC GCGACCAGACTCCCGCGCCC
Downstream 100 bases:
>100_bases GCCATTCCGCCGCGAGCGCGCGATGTCCTACGCGCTCTTGCGGCGCCGCATCATCGCCTCGTACGAGCGGCCCACGCTCT GCGAGAGGATGAGCAGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MNTSATEFDIIAWGATGFTGRLVAEYLARTQDSHRARWALAGRDLDKLEKVRQGLAAIAPSFAELPLLVADARDAASLDA LVPRTRVVCTTVGPYARYGSELVAACVRAGVSYCDLTGEVQWMRRMIDAHHEQARQSGARIVHTCGFDSIPSDLGVLMMQ EHMREHHGGHLEAVRLYMGPMRGGASGGTAASMVQAMEEASTDRSVRRIMAHPHALDPVPGRWRPESKDALGVHYSQELG QWTGPFLMATVNTRVVRRSNALLGHPWGEHFRYAEVASYGAGPKGLLRATGVTAGLGGVVAAMQVKPLRTLLEKKVLPAP GEGPSLEAREKGFFVAQLRGEGTSPRTGKQVRLKGKVAAQGDPGYAATSRMLAESALCLAFDDTPTTGGVLTPASAMGMR LVERLRRAGMTFEVEELST
Sequences:
>Translated_419_residues MNTSATEFDIIAWGATGFTGRLVAEYLARTQDSHRARWALAGRDLDKLEKVRQGLAAIAPSFAELPLLVADARDAASLDA LVPRTRVVCTTVGPYARYGSELVAACVRAGVSYCDLTGEVQWMRRMIDAHHEQARQSGARIVHTCGFDSIPSDLGVLMMQ EHMREHHGGHLEAVRLYMGPMRGGASGGTAASMVQAMEEASTDRSVRRIMAHPHALDPVPGRWRPESKDALGVHYSQELG QWTGPFLMATVNTRVVRRSNALLGHPWGEHFRYAEVASYGAGPKGLLRATGVTAGLGGVVAAMQVKPLRTLLEKKVLPAP GEGPSLEAREKGFFVAQLRGEGTSPRTGKQVRLKGKVAAQGDPGYAATSRMLAESALCLAFDDTPTTGGVLTPASAMGMR LVERLRRAGMTFEVEELST >Mature_419_residues MNTSATEFDIIAWGATGFTGRLVAEYLARTQDSHRARWALAGRDLDKLEKVRQGLAAIAPSFAELPLLVADARDAASLDA LVPRTRVVCTTVGPYARYGSELVAACVRAGVSYCDLTGEVQWMRRMIDAHHEQARQSGARIVHTCGFDSIPSDLGVLMMQ EHMREHHGGHLEAVRLYMGPMRGGASGGTAASMVQAMEEASTDRSVRRIMAHPHALDPVPGRWRPESKDALGVHYSQELG QWTGPFLMATVNTRVVRRSNALLGHPWGEHFRYAEVASYGAGPKGLLRATGVTAGLGGVVAAMQVKPLRTLLEKKVLPAP GEGPSLEAREKGFFVAQLRGEGTSPRTGKQVRLKGKVAAQGDPGYAATSRMLAESALCLAFDDTPTTGGVLTPASAMGMR LVERLRRAGMTFEVEELST
Specific function: Unknown
COG id: COG3268
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the saccharopine dehydrogenase family. Enoyl reductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI55770836, Length=447, Percent_Identity=30.8724832214765, Blast_Score=163, Evalue=3e-40, Organism=Caenorhabditis elegans, GI17560066, Length=446, Percent_Identity=27.1300448430493, Blast_Score=145, Evalue=3e-35, Organism=Caenorhabditis elegans, GI32567112, Length=240, Percent_Identity=32.5, Blast_Score=132, Evalue=3e-31, Organism=Caenorhabditis elegans, GI71991033, Length=441, Percent_Identity=26.984126984127, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI24644140, Length=452, Percent_Identity=29.2035398230088, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI24644142, Length=452, Percent_Identity=29.2035398230088, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI21356081, Length=452, Percent_Identity=29.2035398230088, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI24646278, Length=445, Percent_Identity=28.314606741573, Blast_Score=135, Evalue=7e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR005097 [H]
Pfam domain/function: PF03435 Saccharop_dh [H]
EC number: NA
Molecular weight: Translated: 45110; Mature: 45110
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTSATEFDIIAWGATGFTGRLVAEYLARTQDSHRARWALAGRDLDKLEKVRQGLAAIAP CCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHEEEECCCCHHHHHHHHHHHHHHCC SFAELPLLVADARDAASLDALVPRTRVVCTTVGPYARYGSELVAACVRAGVSYCDLTGEV CHHHCCEEEECCCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEECCCCHH QWMRRMIDAHHEQARQSGARIVHTCGFDSIPSDLGVLMMQEHMREHHGGHLEAVRLYMGP HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHCC MRGGASGGTAASMVQAMEEASTDRSVRRIMAHPHALDPVPGRWRPESKDALGVHYSQELG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHC QWTGPFLMATVNTRVVRRSNALLGHPWGEHFRYAEVASYGAGPKGLLRATGVTAGLGGVV CCCCCEEEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHH AAMQVKPLRTLLEKKVLPAPGEGPSLEAREKGFFVAQLRGEGTSPRTGKQVRLKGKVAAQ HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCEEEEEEECCCCCCCCCCEEEEEEEEEEC GDPGYAATSRMLAESALCLAFDDTPTTGGVLTPASAMGMRLVERLRRAGMTFEVEELST CCCCHHHHHHHHHHCCEEEEECCCCCCCCEECCHHHHHHHHHHHHHHCCCEEEHHCCCC >Mature Secondary Structure MNTSATEFDIIAWGATGFTGRLVAEYLARTQDSHRARWALAGRDLDKLEKVRQGLAAIAP CCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHEEEECCCCHHHHHHHHHHHHHHCC SFAELPLLVADARDAASLDALVPRTRVVCTTVGPYARYGSELVAACVRAGVSYCDLTGEV CHHHCCEEEECCCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEECCCCHH QWMRRMIDAHHEQARQSGARIVHTCGFDSIPSDLGVLMMQEHMREHHGGHLEAVRLYMGP HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHCC MRGGASGGTAASMVQAMEEASTDRSVRRIMAHPHALDPVPGRWRPESKDALGVHYSQELG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHC QWTGPFLMATVNTRVVRRSNALLGHPWGEHFRYAEVASYGAGPKGLLRATGVTAGLGGVV CCCCCEEEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHH AAMQVKPLRTLLEKKVLPAPGEGPSLEAREKGFFVAQLRGEGTSPRTGKQVRLKGKVAAQ HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCEEEEEEECCCCCCCCCCEEEEEEEEEEC GDPGYAATSRMLAESALCLAFDDTPTTGGVLTPASAMGMRLVERLRRAGMTFEVEELST CCCCHHHHHHHHHHCCEEEEECCCCCCCCEECCHHHHHHHHHHHHHHCCCEEEHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230 [H]