| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762416
Identifier: 108762416
GI number: 108762416
Start: 5446910
End: 5448223
Strand: Direct
Name: 108762416
Synonym: MXAN_4412
Alternate gene names: NA
Gene position: 5446910-5448223 (Clockwise)
Preceding gene: 108760832
Following gene: 108762643
Centisome position: 59.6
GC content: 64.69
Gene sequence:
>1314_bases ATGCCTCCCAAGCACATAACCATTCGCGGCCGCTGCCCTCGAGGGCGCGCCGCGGTTCGCCTGGGGAGCGACGTGCCTTC AAACACCGCCTATATCGTTTCCCGCTCCGTCTTCATCCAGCTCGACGGAGCGGGCCAGCTCGTCGCGGCCAATTCGGTTT CCCGTTCCCCCTGCGTCCTCGAGGAAGACGACCTCGCGATCCTGCGAGCCTTCAGCCACGCACGAACGCAAGAAGCCGCG CTCCATACCGTGCGGCAGGAGCGGTCGCTCAGCCCGGAAGCCTTCGCACAAGCCGTCGAGCGGCTCAGGGGAAACAACAT CCTCACCCCCGTGCGCGCCGACTACCGCGCCGAGGACAGCGGCTATGTGCCGGCGTCGACCGGCTTCGCGTCATTCGCGC TGCACCATTGGATGCTGAGGGATTCAGTACGGGTGATGGCGTACCGCTCCGCCATCCTGCCCCACGTCCGGGACAAGGTG GTCGCGGACCTCGGCTGTGGCACCGGCATCCTCTCGATGTTCGCCGCGCAGGGCGGCGCGCGCCATGTCTATGCATTGGA AGAGAGCGAGGTGGCCGCGCTCGCACGGATGATGTTCCGGGCCAATGGCATGGAGGACCGCGTCACGCTTTTGACTGGCA ACAGCAAGGACATCCAGCTCCCCGAACCCGTGGATGTCATCGTCCACGAAATCCTGGGCATCGACCCCTTCTTCGAAAAC GTCATCCCATACATCGATGACGCAAGGAGACGCTTCCTCCGCCCGGGCCAGGGCACCTTGATTCCTCACAAAATAGAAGT CTGTTGCGTTGGGGTGGAGCCGGAGTTCGTTCCCTCCATCGCCCACCGCGCCAGGTTGGAAGCGCGTGAGTTCTCCGGGA TGTATGGCCTCGACTTCTCGCCCTACCTGCACGTGCTGGAACAGGCGGATGAAATCAATGACGACGCCACGTTCCCCCGC CGGGCCAATGACTTCCGCGTGGGCTTCTTCGAGCAAGCCATTCTTTCGGAGGAGTGCGTGGTGCGCACCATTGACCTGGC GGGTGACCTGGAGGCGCAGACGGCGGGCGAGACGCTGTCATCCCTGAAGATACGGGCCGGCGGGCGGCTGGGCTCACTCC TGATGTTCTTCAGGGCCCACCTGGACGACCGGTTGGTGCTGTCCACCTCTCCCTTCTCGCCCCGGACGCACTGGGGCTGG GCGGTGAGGGACCTGCCGCGGGCCCTCTCGGTGAACGCGGGTGACGAAATCACGCTCACCTCCAGCCTGCTCACCGTGGC GGGCCGCCAGAAACTGAAGGTCCTACCGAAGTAA
Upstream 100 bases:
>100_bases TTCCTCCAGCGCAAACATATTCCATTCCAGCGCGGCAGCCGTTTTACAACGCAAACGCATCCACCAACAGCGCTTGCATT GATAAGGAAAGCAGATAGTA
Downstream 100 bases:
>100_bases CCGACGCATCCACCAGGAGCCGTTCCGATGAGCCAGCTTCGCGACCTGAGCGCTGTCGATGCCCTGTATGCCTCCGGCTA TTTCGGCCCCAAGGCCCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MPPKHITIRGRCPRGRAAVRLGSDVPSNTAYIVSRSVFIQLDGAGQLVAANSVSRSPCVLEEDDLAILRAFSHARTQEAA LHTVRQERSLSPEAFAQAVERLRGNNILTPVRADYRAEDSGYVPASTGFASFALHHWMLRDSVRVMAYRSAILPHVRDKV VADLGCGTGILSMFAAQGGARHVYALEESEVAALARMMFRANGMEDRVTLLTGNSKDIQLPEPVDVIVHEILGIDPFFEN VIPYIDDARRRFLRPGQGTLIPHKIEVCCVGVEPEFVPSIAHRARLEAREFSGMYGLDFSPYLHVLEQADEINDDATFPR RANDFRVGFFEQAILSEECVVRTIDLAGDLEAQTAGETLSSLKIRAGGRLGSLLMFFRAHLDDRLVLSTSPFSPRTHWGW AVRDLPRALSVNAGDEITLTSSLLTVAGRQKLKVLPK
Sequences:
>Translated_437_residues MPPKHITIRGRCPRGRAAVRLGSDVPSNTAYIVSRSVFIQLDGAGQLVAANSVSRSPCVLEEDDLAILRAFSHARTQEAA LHTVRQERSLSPEAFAQAVERLRGNNILTPVRADYRAEDSGYVPASTGFASFALHHWMLRDSVRVMAYRSAILPHVRDKV VADLGCGTGILSMFAAQGGARHVYALEESEVAALARMMFRANGMEDRVTLLTGNSKDIQLPEPVDVIVHEILGIDPFFEN VIPYIDDARRRFLRPGQGTLIPHKIEVCCVGVEPEFVPSIAHRARLEAREFSGMYGLDFSPYLHVLEQADEINDDATFPR RANDFRVGFFEQAILSEECVVRTIDLAGDLEAQTAGETLSSLKIRAGGRLGSLLMFFRAHLDDRLVLSTSPFSPRTHWGW AVRDLPRALSVNAGDEITLTSSLLTVAGRQKLKVLPK >Mature_436_residues PPKHITIRGRCPRGRAAVRLGSDVPSNTAYIVSRSVFIQLDGAGQLVAANSVSRSPCVLEEDDLAILRAFSHARTQEAAL HTVRQERSLSPEAFAQAVERLRGNNILTPVRADYRAEDSGYVPASTGFASFALHHWMLRDSVRVMAYRSAILPHVRDKVV ADLGCGTGILSMFAAQGGARHVYALEESEVAALARMMFRANGMEDRVTLLTGNSKDIQLPEPVDVIVHEILGIDPFFENV IPYIDDARRRFLRPGQGTLIPHKIEVCCVGVEPEFVPSIAHRARLEAREFSGMYGLDFSPYLHVLEQADEINDDATFPRR ANDFRVGFFEQAILSEECVVRTIDLAGDLEAQTAGETLSSLKIRAGGRLGSLLMFFRAHLDDRLVLSTSPFSPRTHWGWA VRDLPRALSVNAGDEITLTSSLLTVAGRQKLKVLPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI223556008, Length=322, Percent_Identity=31.9875776397516, Blast_Score=135, Evalue=6e-32, Organism=Homo sapiens, GI74099699, Length=303, Percent_Identity=27.7227722772277, Blast_Score=135, Evalue=6e-32, Organism=Homo sapiens, GI223556010, Length=320, Percent_Identity=32.1875, Blast_Score=135, Evalue=7e-32, Organism=Homo sapiens, GI44771198, Length=317, Percent_Identity=31.5457413249211, Blast_Score=135, Evalue=8e-32, Organism=Homo sapiens, GI154759421, Length=304, Percent_Identity=28.9473684210526, Blast_Score=126, Evalue=3e-29, Organism=Homo sapiens, GI151301219, Length=304, Percent_Identity=28.9473684210526, Blast_Score=126, Evalue=3e-29, Organism=Homo sapiens, GI227908867, Length=319, Percent_Identity=33.5423197492163, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI40288288, Length=354, Percent_Identity=28.5310734463277, Blast_Score=112, Evalue=8e-25, Organism=Homo sapiens, GI46255049, Length=359, Percent_Identity=28.9693593314763, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI46255047, Length=359, Percent_Identity=28.9693593314763, Blast_Score=107, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17566490, Length=305, Percent_Identity=29.5081967213115, Blast_Score=117, Evalue=9e-27, Organism=Saccharomyces cerevisiae, GI6319508, Length=302, Percent_Identity=29.1390728476821, Blast_Score=130, Evalue=4e-31, Organism=Drosophila melanogaster, GI21356361, Length=306, Percent_Identity=29.0849673202614, Blast_Score=125, Evalue=8e-29, Organism=Drosophila melanogaster, GI24581602, Length=334, Percent_Identity=27.5449101796407, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24646718, Length=312, Percent_Identity=29.4871794871795, Blast_Score=114, Evalue=9e-26, Organism=Drosophila melanogaster, GI24583607, Length=296, Percent_Identity=33.1081081081081, Blast_Score=109, Evalue=3e-24, Organism=Drosophila melanogaster, GI21357573, Length=306, Percent_Identity=29.0849673202614, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24647025, Length=306, Percent_Identity=29.0849673202614, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI24645553, Length=346, Percent_Identity=28.0346820809249, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24665073, Length=121, Percent_Identity=34.7107438016529, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24646716, Length=281, Percent_Identity=27.4021352313167, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48208; Mature: 48076
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPKHITIRGRCPRGRAAVRLGSDVPSNTAYIVSRSVFIQLDGAGQLVAANSVSRSPCVL CCCCEEEEECCCCCCCEEEEECCCCCCCCEEEEEEEEEEEECCCCCEEEECCCCCCCCEE EEDDLAILRAFSHARTQEAALHTVRQERSLSPEAFAQAVERLRGNNILTPVRADYRAEDS CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC GYVPASTGFASFALHHWMLRDSVRVMAYRSAILPHVRDKVVADLGCGTGILSMFAAQGGA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC RHVYALEESEVAALARMMFRANGMEDRVTLLTGNSKDIQLPEPVDVIVHEILGIDPFFEN CEEEEECHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCHHHHH VIPYIDDARRRFLRPGQGTLIPHKIEVCCVGVEPEFVPSIAHRARLEAREFSGMYGLDFS HHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCH PYLHVLEQADEINDDATFPRRANDFRVGFFEQAILSEECVVRTIDLAGDLEAQTAGETLS HHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHCCCHHEEEECCCCCCCHHHHHHHHH SLKIRAGGRLGSLLMFFRAHLDDRLVLSTSPFSPRTHWGWAVRDLPRALSVNAGDEITLT HEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHCCHHHCCCCCCCEEEH SSLLTVAGRQKLKVLPK HHHHHHHCCCCEECCCC >Mature Secondary Structure PPKHITIRGRCPRGRAAVRLGSDVPSNTAYIVSRSVFIQLDGAGQLVAANSVSRSPCVL CCCEEEEECCCCCCCEEEEECCCCCCCCEEEEEEEEEEEECCCCCEEEECCCCCCCCEE EEDDLAILRAFSHARTQEAALHTVRQERSLSPEAFAQAVERLRGNNILTPVRADYRAEDS CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC GYVPASTGFASFALHHWMLRDSVRVMAYRSAILPHVRDKVVADLGCGTGILSMFAAQGGA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC RHVYALEESEVAALARMMFRANGMEDRVTLLTGNSKDIQLPEPVDVIVHEILGIDPFFEN CEEEEECHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCHHHHH VIPYIDDARRRFLRPGQGTLIPHKIEVCCVGVEPEFVPSIAHRARLEAREFSGMYGLDFS HHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCH PYLHVLEQADEINDDATFPRRANDFRVGFFEQAILSEECVVRTIDLAGDLEAQTAGETLS HHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHCCCHHEEEECCCCCCCHHHHHHHHH SLKIRAGGRLGSLLMFFRAHLDDRLVLSTSPFSPRTHWGWAVRDLPRALSVNAGDEITLT HEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHCCHHHCCCCCCCEEEH SSLLTVAGRQKLKVLPK HHHHHHHCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA