| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762348
Identifier: 108762348
GI number: 108762348
Start: 5992055
End: 5993263
Strand: Direct
Name: 108762348
Synonym: MXAN_4793
Alternate gene names: NA
Gene position: 5992055-5993263 (Clockwise)
Preceding gene: 108757172
Following gene: 108763541
Centisome position: 65.56
GC content: 71.55
Gene sequence:
>1209_bases ATGTTGCTCGCCTCCACCGTCCTGCTGCTTGCCGCCTGCCTCGGACTGTTCGTTCTCACCGTCCAGTTCGCGCTCGTGCT GCGTCACCGGCGTGAGCCGTCCCCCACCGCGCAACCGGGCACGCCCCGCCCGGGCATCTCCATCCTCAAGCCGCTGTGCG GCGTGGATGACGACCTGGAAGCCAACCTGGCGCAGTTCGCGGCGCTGGACTACGCGGGCGCGTACGAGGTGGTGCTCGGC GTCAAGGATGCCAGGGACCCGGCCTTCGCCGTGGCCCGCGCGGCCGTGGCCCGCTGGCCCCACGTCATGCGCCTGGAAGT CCAGGACGGCGAGCCGGGCCGCAACCCGAAGGTGAACCAGCTCATCACCCTGGCGGACCGGGCGCGCTACGACGTGCTGG TCATCAGCGACAGCAACACGCGGGTGGCGCCGGGATACCTGGAGGAGATTGCCCAGGCCTTCGAGGACCCGGCGGTGGGC TGTGTCACCCACCCGGTGGCGGGCATGGGCGAGCGCTCCTTCGGCTCGCTCCTGGACAACCTGCACCTGGGCGCCAGCGC GGCGGCGGGGATGATTGCCGCCAAGCGGCTGGCGGGCCAGGACATCGTGGTGGGCAAGTCCATGGCGCTGCGCCGCGAGG ACGTGGACGCGCTGGGGGGCTTCTTCTCCGTGAAGGATGTACTGGCGGAGGACTACGTCATCGGCCAGTGGGTGACGCGG AAACTGGGCCGGCGCGTGGTGATGGCGCACACGCCCGTGTTCAACGTGTCGCTGCGCAAGAGCGTCCTGTCCTTCTTCCA GCGCTATGTGCGCTGGAGCGTGATTCACCGGACCGCGGTGTCTCCGGGGACGTACCTGGCCCAGGCCCTGCTGAACCCCA CGCCGCTGGCCCTGTTGGGCGCGATGCTGGCCCCCTCCTCCGACACCGCGGCGCTCTGCCTGGTGGTGGCCCTGGGCAAG GTCGCGGTAGACCTCTCCACCGTGCGCGCCCTGCGGCCGCAGGCCCTGTCGTGGGACGCGGTGCCCGCCGTCTTCGCCAA GGACGCCCTGCTCTTCGCGGCCTGGAGCTACGCGCTCTTCTCCCGCACTGTGAACTGGCGCGGCACCCGGCTGCGCGTGG GCCGGGGCACCCGGCTGATGCCGGTGCGCACGGCAGGCCTGACGTCCGAGCCCGCGCTGCCCCAGGGCGACCGCATCCTC GCGGGCTGA
Upstream 100 bases:
>100_bases GGCCCGCCCCGGGCGCTTCGCGGGGCTGACGTGGAAGGCCTCTAGCGTGGCAACCGTGGTCGCGCCATGACGGCGCACCG GCCCCGGGGATTGCCCGCGA
Downstream 100 bases:
>100_bases CCCGGCGACGCGCCCTACCAGGGCCTGCCTGCCCGCATGCTGCGGCGAGCACCATGTCGCCGCTCGCGGAGAATGATGGC GCCCTTCAGCGGCGTTCATC
Product: glycosyltransferase
Products: UDP; D-glucosyl-N-acylsphingosine
Alternate protein names: Glycosyltransferase; Glycosyl Transferase Family Protein; Glucosyltransferase; Cell Wall Biosynthesis Glycosyltransferase-Like Protein; Glycosyl Transferase Group 2 Family; Glycosyl Transferase; Cell Wall Biosynthesis Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Acyl-CoA Dehydrogenase-Like; Acyl-CoA Dehydrogenase-Like Protein; Glycosyl Transferase Protein; Glycosyl Tranferase Homolog; Syl Transferase Group 2 Family Protein; Putatiave Glycosyltransferase; Family 2 Glycosyl Transferase
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MLLASTVLLLAACLGLFVLTVQFALVLRHRREPSPTAQPGTPRPGISILKPLCGVDDDLEANLAQFAALDYAGAYEVVLG VKDARDPAFAVARAAVARWPHVMRLEVQDGEPGRNPKVNQLITLADRARYDVLVISDSNTRVAPGYLEEIAQAFEDPAVG CVTHPVAGMGERSFGSLLDNLHLGASAAAGMIAAKRLAGQDIVVGKSMALRREDVDALGGFFSVKDVLAEDYVIGQWVTR KLGRRVVMAHTPVFNVSLRKSVLSFFQRYVRWSVIHRTAVSPGTYLAQALLNPTPLALLGAMLAPSSDTAALCLVVALGK VAVDLSTVRALRPQALSWDAVPAVFAKDALLFAAWSYALFSRTVNWRGTRLRVGRGTRLMPVRTAGLTSEPALPQGDRIL AG
Sequences:
>Translated_402_residues MLLASTVLLLAACLGLFVLTVQFALVLRHRREPSPTAQPGTPRPGISILKPLCGVDDDLEANLAQFAALDYAGAYEVVLG VKDARDPAFAVARAAVARWPHVMRLEVQDGEPGRNPKVNQLITLADRARYDVLVISDSNTRVAPGYLEEIAQAFEDPAVG CVTHPVAGMGERSFGSLLDNLHLGASAAAGMIAAKRLAGQDIVVGKSMALRREDVDALGGFFSVKDVLAEDYVIGQWVTR KLGRRVVMAHTPVFNVSLRKSVLSFFQRYVRWSVIHRTAVSPGTYLAQALLNPTPLALLGAMLAPSSDTAALCLVVALGK VAVDLSTVRALRPQALSWDAVPAVFAKDALLFAAWSYALFSRTVNWRGTRLRVGRGTRLMPVRTAGLTSEPALPQGDRIL AG >Mature_402_residues MLLASTVLLLAACLGLFVLTVQFALVLRHRREPSPTAQPGTPRPGISILKPLCGVDDDLEANLAQFAALDYAGAYEVVLG VKDARDPAFAVARAAVARWPHVMRLEVQDGEPGRNPKVNQLITLADRARYDVLVISDSNTRVAPGYLEEIAQAFEDPAVG CVTHPVAGMGERSFGSLLDNLHLGASAAAGMIAAKRLAGQDIVVGKSMALRREDVDALGGFFSVKDVLAEDYVIGQWVTR KLGRRVVMAHTPVFNVSLRKSVLSFFQRYVRWSVIHRTAVSPGTYLAQALLNPTPLALLGAMLAPSSDTAALCLVVALGK VAVDLSTVRALRPQALSWDAVPAVFAKDALLFAAWSYALFSRTVNWRGTRLRVGRGTRLMPVRTAGLTSEPALPQGDRIL AG
Specific function: Unknown
COG id: COG1215
COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4507811, Length=356, Percent_Identity=28.9325842696629, Blast_Score=135, Evalue=5e-32, Organism=Caenorhabditis elegans, GI32566973, Length=362, Percent_Identity=25.6906077348066, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI25147526, Length=299, Percent_Identity=27.4247491638796, Blast_Score=105, Evalue=4e-23, Organism=Caenorhabditis elegans, GI25149574, Length=358, Percent_Identity=24.5810055865922, Blast_Score=95, Evalue=6e-20, Organism=Caenorhabditis elegans, GI25149577, Length=358, Percent_Identity=24.5810055865922, Blast_Score=95, Evalue=7e-20, Organism=Caenorhabditis elegans, GI32564728, Length=401, Percent_Identity=23.4413965087282, Blast_Score=95, Evalue=7e-20, Organism=Caenorhabditis elegans, GI25149580, Length=294, Percent_Identity=25.5102040816327, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24657569, Length=304, Percent_Identity=31.25, Blast_Score=116, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.4.1.80
Molecular weight: Translated: 43150; Mature: 43150
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLASTVLLLAACLGLFVLTVQFALVLRHRREPSPTAQPGTPRPGISILKPLCGVDDDLE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHH ANLAQFAALDYAGAYEVVLGVKDARDPAFAVARAAVARWPHVMRLEVQDGEPGRNPKVNQ HHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHH LITLADRARYDVLVISDSNTRVAPGYLEEIAQAFEDPAVGCVTHPVAGMGERSFGSLLDN HHHHHCCCCEEEEEEECCCCEECCHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHH LHLGASAAAGMIAAKRLAGQDIVVGKSMALRREDVDALGGFFSVKDVLAEDYVIGQWVTR HCCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH KLGRRVVMAHTPVFNVSLRKSVLSFFQRYVRWSVIHRTAVSPGTYLAQALLNPTPLALLG HHCCEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHH AMLAPSSDTAALCLVVALGKVAVDLSTVRALRPQALSWDAVPAVFAKDALLFAAWSYALF HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SRTVNWRGTRLRVGRGTRLMPVRTAGLTSEPALPQGDRILAG HHCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLLASTVLLLAACLGLFVLTVQFALVLRHRREPSPTAQPGTPRPGISILKPLCGVDDDLE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHH ANLAQFAALDYAGAYEVVLGVKDARDPAFAVARAAVARWPHVMRLEVQDGEPGRNPKVNQ HHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHH LITLADRARYDVLVISDSNTRVAPGYLEEIAQAFEDPAVGCVTHPVAGMGERSFGSLLDN HHHHHCCCCEEEEEEECCCCEECCHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHH LHLGASAAAGMIAAKRLAGQDIVVGKSMALRREDVDALGGFFSVKDVLAEDYVIGQWVTR HCCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH KLGRRVVMAHTPVFNVSLRKSVLSFFQRYVRWSVIHRTAVSPGTYLAQALLNPTPLALLG HHCCEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHH AMLAPSSDTAALCLVVALGKVAVDLSTVRALRPQALSWDAVPAVFAKDALLFAAWSYALF HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SRTVNWRGTRLRVGRGTRLMPVRTAGLTSEPALPQGDRILAG HHCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-glucose; N-acylsphingosine
Specific reaction: UDP-glucose + N-acylsphingosine = UDP + D-glucosyl-N-acylsphingosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA